RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 PROM2Q8N271 834 aa10.77□□□□□ -0.69
NPHP3-209ENST00000493732 TXLNBQ8N3L3 684 aa10.77□□□□□ -0.69
NPHP3-209ENST00000493732 RAD54LQ92698 747 aa10.77□□□□□ -0.69
NPHP3-209ENST00000493732 DUSP9Q99956 384 aaKnown RBP10.77□□□□□ -0.69
NPHP3-209ENST00000493732 NOC4LQ9BVI4 516 aaKnown RBP10.77□□□□□ -0.69
NPHP3-209ENST00000493732 PSTPIP2Q9H939 334 aa10.77□□□□□ -0.69
NPHP3-209ENST00000493732 KANSL2Q9H9L4 492 aa10.77□□□□□ -0.69
NPHP3-209ENST00000493732 GPCPD1Q9NPB8 672 aa10.77□□□□□ -0.69
NPHP3-209ENST00000493732 NYAP2Q9P242 653 aa10.77□□□□□ -0.69
NPHP3-209ENST00000493732 PLSCR1O15162 318 aa10.76□□□□□ -0.69
NPHP3-209ENST00000493732 FANCGO15287 622 aa10.76□□□□□ -0.69
NPHP3-209ENST00000493732 TRIM37O94972 964 aa10.76□□□□□ -0.69
NPHP3-209ENST00000493732 CHMP4BP1P59074 171 aa10.76□□□□□ -0.69
NPHP3-209ENST00000493732 ERVK-24P63145 666 aa10.76□□□□□ -0.69
NPHP3-209ENST00000493732 STK4Q13043 487 aa10.76□□□□□ -0.69
NPHP3-209ENST00000493732 GRB10Q13322 594 aa10.76□□□□□ -0.69
NPHP3-209ENST00000493732 BRD3Q15059 726 aa10.76□□□□□ -0.69
NPHP3-209ENST00000493732 MEA1Q16626 185 aa10.76□□□□□ -0.69
NPHP3-209ENST00000493732 CCDC96Q2M329 555 aa10.76□□□□□ -0.69
NPHP3-209ENST00000493732 STRIP1Q5VSL9 837 aa10.76□□□□□ -0.69
NPHP3-209ENST00000493732 ANKRD40Q6AI12 368 aa10.76□□□□□ -0.69
NPHP3-209ENST00000493732 CERS5Q8N5B7 392 aa10.76□□□□□ -0.69
NPHP3-209ENST00000493732 SNX29Q8TEQ0 813 aa10.76□□□□□ -0.69
NPHP3-209ENST00000493732 COA7Q96BR5 231 aa10.76□□□□□ -0.69
NPHP3-209ENST00000493732 CNOT6LQ96LI5 555 aaKnown RBP10.76□□□□□ -0.69
NPHP3-209ENST00000493732 IDI2Q9BXS1 227 aa10.76□□□□□ -0.69
NPHP3-209ENST00000493732 TRIM34Q9BYJ4 488 aa10.76□□□□□ -0.69
NPHP3-209ENST00000493732 PI4KBQ9UBF8 816 aa10.76□□□□□ -0.69
NPHP3-209ENST00000493732 DDX25Q9UHL0 483 aaKnown RBP10.76□□□□□ -0.69
NPHP3-209ENST00000493732 NRXN2Q9P2S2 1712 aa10.76□□□□□ -0.69
NPHP3-209ENST00000493732 F8W031 263 aaPredicted RBP10.76□□□□□ -0.69
NPHP3-209ENST00000493732 MPHOSPH10O00566 681 aaKnown RBP10.76□□□□□ -0.69
NPHP3-209ENST00000493732 KRT86O43790 486 aa10.76□□□□□ -0.69
NPHP3-209ENST00000493732 TNNI2P48788 182 aa10.76□□□□□ -0.69
NPHP3-209ENST00000493732 PMS1P54277 932 aaKnown RBP10.76□□□□□ -0.69
NPHP3-209ENST00000493732 DMTNQ08495 405 aa10.76□□□□□ -0.69
NPHP3-209ENST00000493732 AP3B2Q13367 1082 aa10.76□□□□□ -0.69
NPHP3-209ENST00000493732 TMEM119Q4V9L6 283 aa10.76□□□□□ -0.69
NPHP3-209ENST00000493732 HYIQ5T013 277 aa10.76□□□□□ -0.69
NPHP3-209ENST00000493732 APOBEC3HQ6NTF7 200 aaKnown RBP10.76□□□□□ -0.69
NPHP3-209ENST00000493732 SLC51AQ86UW1 340 aa10.76□□□□□ -0.69
NPHP3-209ENST00000493732 SLFN12Q8IYM2 578 aa10.76□□□□□ -0.69
NPHP3-209ENST00000493732 EDEM3Q9BZQ6 932 aa10.76□□□□□ -0.69
NPHP3-209ENST00000493732 ARFGAP3Q9NP61 516 aa10.76□□□□□ -0.69
NPHP3-209ENST00000493732 DDX4Q9NQI0 724 aaKnown RBP10.76□□□□□ -0.69
NPHP3-209ENST00000493732 BLOC1S4Q9NUP1 217 aa10.76□□□□□ -0.69
NPHP3-209ENST00000493732 TMEM260Q9NX78 707 aa10.76□□□□□ -0.69
NPHP3-209ENST00000493732 SYNPO2Q9UMS6 1093 aa10.76□□□□□ -0.69
NPHP3-209ENST00000493732 PCDHA12Q9UN75 941 aa10.76□□□□□ -0.69
NPHP3-209ENST00000493732 CCDC151A5D8V7 595 aa10.75□□□□□ -0.69
NPHP3-209ENST00000493732 ERLIN1O75477 346 aa10.75□□□□□ -0.69
NPHP3-209ENST00000493732 ZSCAN20P17040 1043 aaPredicted RBP10.75□□□□□ -0.69
NPHP3-209ENST00000493732 CRKP46108 304 aa10.75□□□□□ -0.69
NPHP3-209ENST00000493732 CACNB1Q02641 598 aaPredicted RBP10.75□□□□□ -0.69
NPHP3-209ENST00000493732 TEX35Q5T0J7 233 aa10.75□□□□□ -0.69
NPHP3-209ENST00000493732 KCTD17Q8N5Z5 321 aa10.75□□□□□ -0.69
NPHP3-209ENST00000493732 RPGRIP1Q96KN7 1286 aa10.75□□□□□ -0.69
NPHP3-209ENST00000493732 PCMTD1Q96MG8 357 aaPredicted RBP10.75□□□□□ -0.69
NPHP3-209ENST00000493732 PNMA5Q96PV4 448 aa10.75□□□□□ -0.69
NPHP3-209ENST00000493732 TSGA10Q9BZW7 698 aa10.75□□□□□ -0.69
NPHP3-209ENST00000493732 GBP3Q9H0R5 595 aa10.75□□□□□ -0.69
NPHP3-209ENST00000493732 CYP3A7-CYP3A51PA0A087WV96 503 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 B4DLN1 442 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 EIF3CLB5ME19 914 aaKnown RBP10.74□□□□□ -0.69
NPHP3-209ENST00000493732 PSMD14O00487 310 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 COBLO75128 1261 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 ZRANB2O95218 330 aaKnown RBP eCLIP10.74□□□□□ -0.69
NPHP3-209ENST00000493732 TDP2O95551 362 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 GNA14O95837 355 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 FOSP01100 380 aaPredicted RBP10.74□□□□□ -0.69
NPHP3-209ENST00000493732 CYP3A7P24462 503 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 MAN2A1Q16706 1144 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 CERKLQ49MI3 558 aaPredicted RBP10.74□□□□□ -0.69
NPHP3-209ENST00000493732 TMEM179Q6ZVK1 233 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 ACRBPQ8NEB7 543 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 HNRNPLLQ8WVV9 542 aaKnown RBP10.74□□□□□ -0.69
NPHP3-209ENST00000493732 EIF3CQ99613 913 aaKnown RBP10.74□□□□□ -0.69
NPHP3-209ENST00000493732 SLF1Q9BQI6 1058 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 TTYH3Q9C0H2 523 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 NUCKS1Q9H1E3 243 aaKnown RBP10.74□□□□□ -0.69
NPHP3-209ENST00000493732 SERPINA10Q9UK55 444 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 CTAGE15A4D2H0 777 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 MYMKA6NI61 221 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 TBX3O15119 743 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 SLC37A4O43826 429 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 CTAGE8P0CG41 777 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 PNMA6AP0CW24 399 aaPredicted RBP10.74□□□□□ -0.69
NPHP3-209ENST00000493732 MCM3P25205 808 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 HNRNPH3P31942 346 aaKnown RBP10.74□□□□□ -0.69
NPHP3-209ENST00000493732 ARHGAP25P42331 645 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 SLC1A4P43007 532 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 SCNN1DP51172 638 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 EIF6P56537 245 aaKnown RBP10.74□□□□□ -0.69
NPHP3-209ENST00000493732 ATP2B2Q01814 1243 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 MCM6Q14566 821 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 SPA17Q15506 151 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 DOK7Q18PE1 504 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 VWA3BQ502W6 1294 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 HAUS3Q68CZ6 603 aa10.74□□□□□ -0.69
NPHP3-209ENST00000493732 CC2D2BQ6DHV5 1058 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms