RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 PHF20Q9BVI0 1012 aa7.95□□□□□ -1.14
HERC4-211ENST00000492996 KAT14Q9H8E8 782 aa7.95□□□□□ -1.14
HERC4-211ENST00000492996 TUBE1Q9UJT0 475 aa7.95□□□□□ -1.14
HERC4-211ENST00000492996 MYH6P13533 1939 aa7.95□□□□□ -1.14
HERC4-211ENST00000492996 VWA3AA6NCI4 1184 aa7.95□□□□□ -1.14
HERC4-211ENST00000492996 SLC15A5A6NIM6 579 aa7.95□□□□□ -1.14
HERC4-211ENST00000492996 SMTNL1A8MU46 457 aa7.95□□□□□ -1.14
HERC4-211ENST00000492996 F8W031 263 aaPredicted RBP7.95□□□□□ -1.14
HERC4-211ENST00000492996 RIMBP2O15034 1052 aa7.95□□□□□ -1.14
HERC4-211ENST00000492996 ORC4O43929 436 aa7.95□□□□□ -1.14
HERC4-211ENST00000492996 TNNT1P13805 278 aa7.95□□□□□ -1.14
HERC4-211ENST00000492996 CDC25BP30305 580 aa7.95□□□□□ -1.14
HERC4-211ENST00000492996 CCDC96Q2M329 555 aa7.95□□□□□ -1.14
HERC4-211ENST00000492996 REPS2Q8NFH8 660 aa7.95□□□□□ -1.14
HERC4-211ENST00000492996 AS3MTQ9HBK9 375 aa7.95□□□□□ -1.14
HERC4-211ENST00000492996 RBM28Q9NW13 759 aaKnown RBP7.95□□□□□ -1.14
HERC4-211ENST00000492996 FANCLQ9NW38 375 aa7.95□□□□□ -1.14
HERC4-211ENST00000492996 CNTNAP5Q8WYK1 1306 aa7.95□□□□□ -1.14
HERC4-211ENST00000492996 RIOK3O14730 519 aaKnown RBP7.94□□□□□ -1.14
HERC4-211ENST00000492996 MSCO60682 206 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 GOLGA8HP0CJ92 632 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 CALM1P0DP23 149 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 CALM2P0DP24 149 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 CALM3P0DP25 149 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 MCM7P33993 719 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 RCAN1P53805 252 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 SP3Q02447 781 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 GOLGA8FQ08AF8 430 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 GOLGA8DPQ0D2H9 430 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 POSTNQ15063 836 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 C12orf60Q5U649 245 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 KLHL10Q6JEL2 608 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 PNMA1Q8ND90 353 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 MYRIPQ8NFW9 859 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 BRMS1Q9HCU9 246 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 IL17RBQ9NRM6 502 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 SRPRBQ9Y5M8 271 aaKnown RBP7.94□□□□□ -1.14
HERC4-211ENST00000492996 DDAH1O94760 285 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 BAG3O95817 575 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 TSPY3P0CV98 308 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 TSPY8P0CW00 308 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 SCG2P13521 617 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 CDC25AP30304 524 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 UBASH3AP57075 661 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 MYL5Q02045 173 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 PPP2R5BQ15173 497 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 ZNF444Q8N0Y2 327 aaPredicted RBP7.94□□□□□ -1.14
HERC4-211ENST00000492996 CEP131Q9UPN4 1083 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 DENND4AQ7Z401 1863 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 A0A087X0B3 334 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 BTDP43251 543 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 PTGDRQ13258 359 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 GRB14Q14449 540 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 NPY5RQ15761 445 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 TTC38Q5R3I4 469 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 MFSD14BQ5SR56 506 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 SMARCE1Q969G3 411 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 HSD3B7Q9H2F3 369 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 MAN1B1Q9UKM7 699 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 SYNGAP1Q96PV0 1343 aa7.94□□□□□ -1.14
HERC4-211ENST00000492996 FAM237AA0A1B0GTK4 181 aa7.93□□□□□ -1.14
HERC4-211ENST00000492996 STX17P56962 302 aa7.93□□□□□ -1.14
HERC4-211ENST00000492996 CCZ1BP86790 482 aa7.93□□□□□ -1.14
HERC4-211ENST00000492996 CCZ1P86791 482 aaPredicted RBP7.93□□□□□ -1.14
HERC4-211ENST00000492996 AMOTL1Q8IY63 956 aa7.93□□□□□ -1.14
HERC4-211ENST00000492996 LPAR1Q92633 364 aa7.93□□□□□ -1.14
HERC4-211ENST00000492996 SYMPKQ92797 1274 aaKnown RBP7.93□□□□□ -1.14
HERC4-211ENST00000492996 PRIMPOLQ96LW4 560 aa7.93□□□□□ -1.14
HERC4-211ENST00000492996 HOOK1Q9UJC3 728 aaKnown RBP7.93□□□□□ -1.14
HERC4-211ENST00000492996 ABT1Q9ULW3 272 aaKnown RBP7.93□□□□□ -1.14
HERC4-211ENST00000492996 TMEM232C9JQI7 657 aa7.93□□□□□ -1.14
HERC4-211ENST00000492996 COBLO75128 1261 aa7.93□□□□□ -1.14
HERC4-211ENST00000492996 MAPK4P31152 587 aa7.93□□□□□ -1.14
HERC4-211ENST00000492996 PTPN11Q06124 597 aaPredicted RBP7.93□□□□□ -1.14
HERC4-211ENST00000492996 RASA3Q14644 834 aa7.93□□□□□ -1.14
HERC4-211ENST00000492996 USP17L2Q6R6M4 530 aa7.93□□□□□ -1.14
HERC4-211ENST00000492996 HOMER1Q86YM7 354 aa7.93□□□□□ -1.14
HERC4-211ENST00000492996 TEX11Q8IYF3 940 aa7.93□□□□□ -1.14
HERC4-211ENST00000492996 SMYD4Q8IYR2 804 aaPredicted RBP7.93□□□□□ -1.14
HERC4-211ENST00000492996 GMCL1P1Q8NEA9 526 aa7.93□□□□□ -1.14
HERC4-211ENST00000492996 OPTNQ96CV9 577 aa7.93□□□□□ -1.14
HERC4-211ENST00000492996 BPIFA3Q9BQP9 254 aa7.93□□□□□ -1.14
HERC4-211ENST00000492996 BEGAINQ9BUH8 593 aa7.93□□□□□ -1.14
HERC4-211ENST00000492996 VAT1LQ9HCJ6 419 aa7.93□□□□□ -1.14
HERC4-211ENST00000492996 GJA3Q9Y6H8 435 aa7.93□□□□□ -1.14
HERC4-211ENST00000492996 SFPQP23246 707 aaKnown RBP eCLIP7.93□□□□□ -1.14
HERC4-211ENST00000492996 KIF5BP33176 963 aa7.93□□□□□ -1.14
HERC4-211ENST00000492996 GTF2IP78347 998 aa7.93□□□□□ -1.14
HERC4-211ENST00000492996 MDM2Q00987 491 aaPredicted RBP7.93□□□□□ -1.14
HERC4-211ENST00000492996 PICALMQ13492 652 aa7.93□□□□□ -1.14
HERC4-211ENST00000492996 COL19A1Q14993 1142 aa7.93□□□□□ -1.14
HERC4-211ENST00000492996 ARMCX5Q6P1M9 558 aa7.93□□□□□ -1.14
HERC4-211ENST00000492996 HEATR3Q7Z4Q2 680 aa7.93□□□□□ -1.14
HERC4-211ENST00000492996 POTEDQ86YR6 584 aa7.93□□□□□ -1.14
HERC4-211ENST00000492996 FAM177A1Q8N128 213 aaPredicted RBP7.93□□□□□ -1.14
HERC4-211ENST00000492996 TRIM47Q96LD4 638 aa7.93□□□□□ -1.14
HERC4-211ENST00000492996 ASTN2O75129 1339 aaPredicted RBP7.92□□□□□ -1.14
HERC4-211ENST00000492996 IKBKBO14920 756 aa7.92□□□□□ -1.14
HERC4-211ENST00000492996 ACTN4O43707 911 aaKnown RBP7.92□□□□□ -1.14
HERC4-211ENST00000492996 CAP2P40123 477 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms