RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 PPP1R3GB7ZBB8 358 aa15.8■□□□□ 0.12
PTPN7-216ENST00000492977 SLC26A4O43511 780 aa15.8■□□□□ 0.12
PTPN7-216ENST00000492977 MARCH6O60337 910 aa15.8■□□□□ 0.12
PTPN7-216ENST00000492977 ARHGAP4P98171 946 aa15.8■□□□□ 0.12
PTPN7-216ENST00000492977 AMPD3Q01432 767 aa15.8■□□□□ 0.12
PTPN7-216ENST00000492977 DHX8Q14562 1220 aaKnown RBP15.8■□□□□ 0.12
PTPN7-216ENST00000492977 ZYXQ15942 572 aaKnown RBP15.8■□□□□ 0.12
PTPN7-216ENST00000492977 ZNF658Q5TYW1 1059 aaPredicted RBP15.8■□□□□ 0.12
PTPN7-216ENST00000492977 ARHGAP27Q6ZUM4 889 aa15.8■□□□□ 0.12
PTPN7-216ENST00000492977 GPC2Q8N158 579 aa15.8■□□□□ 0.12
PTPN7-216ENST00000492977 KIFC2Q96AC6 838 aa15.8■□□□□ 0.12
PTPN7-216ENST00000492977 FEZ1Q99689 392 aa15.8■□□□□ 0.12
PTPN7-216ENST00000492977 GLIS2Q9BZE0 524 aaPredicted RBP15.8■□□□□ 0.12
PTPN7-216ENST00000492977 GTPBP4Q9BZE4 634 aaKnown RBP15.8■□□□□ 0.12
PTPN7-216ENST00000492977 KIAA1683Q9H0B3 1180 aa15.8■□□□□ 0.12
PTPN7-216ENST00000492977 KCNF1Q9H3M0 494 aa15.8■□□□□ 0.12
PTPN7-216ENST00000492977 GPRC5DQ9NZD1 345 aa15.8■□□□□ 0.12
PTPN7-216ENST00000492977 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.8■□□□□ 0.12
PTPN7-216ENST00000492977 STK17AQ9UEE5 414 aa15.8■□□□□ 0.12
PTPN7-216ENST00000492977 NRBP1Q9UHY1 535 aa15.8■□□□□ 0.12
PTPN7-216ENST00000492977 SCAF8Q9UPN6 1271 aaKnown RBP15.8■□□□□ 0.12
PTPN7-216ENST00000492977 NFE2L3Q9Y4A8 694 aa15.8■□□□□ 0.12
PTPN7-216ENST00000492977 STK24Q9Y6E0 443 aa15.8■□□□□ 0.12
PTPN7-216ENST00000492977 ASTN2O75129 1339 aaPredicted RBP15.8■□□□□ 0.12
PTPN7-216ENST00000492977 OPLAHO14841 1288 aa15.79■□□□□ 0.12
PTPN7-216ENST00000492977 SERPINC1P01008 464 aa15.79■□□□□ 0.12
PTPN7-216ENST00000492977 ATP1A3P13637 1013 aa15.79■□□□□ 0.12
PTPN7-216ENST00000492977 ZNF18P17022 549 aa15.79■□□□□ 0.12
PTPN7-216ENST00000492977 SREBF1P36956 1147 aa15.79■□□□□ 0.12
PTPN7-216ENST00000492977 UBASH3AP57075 661 aa15.79■□□□□ 0.12
PTPN7-216ENST00000492977 SPATA1Q5VX52 437 aa15.79■□□□□ 0.12
PTPN7-216ENST00000492977 KRT79Q5XKE5 535 aa15.79■□□□□ 0.12
PTPN7-216ENST00000492977 SLFN12Q8IYM2 578 aa15.79■□□□□ 0.12
PTPN7-216ENST00000492977 C7orf25Q9BPX7 421 aa15.79■□□□□ 0.12
PTPN7-216ENST00000492977 PCDHA12Q9UN75 941 aa15.79■□□□□ 0.12
PTPN7-216ENST00000492977 MRPL11Q9Y3B7 192 aaKnown RBP15.79■□□□□ 0.12
PTPN7-216ENST00000492977 TBX3O15119 743 aa15.79■□□□□ 0.12
PTPN7-216ENST00000492977 WDR46O15213 610 aaKnown RBP15.79■□□□□ 0.12
PTPN7-216ENST00000492977 CYP3A4P08684 503 aa15.79■□□□□ 0.12
PTPN7-216ENST00000492977 CD44P16070 742 aaKnown RBP15.79■□□□□ 0.12
PTPN7-216ENST00000492977 CIITAP33076 1130 aa15.79■□□□□ 0.12
PTPN7-216ENST00000492977 GSDMDP57764 484 aa15.79■□□□□ 0.12
PTPN7-216ENST00000492977 Q4G0T1 1027 aa15.79■□□□□ 0.12
PTPN7-216ENST00000492977 NBPF12Q5TAG4 269 aaPredicted RBP15.79■□□□□ 0.12
PTPN7-216ENST00000492977 MED15Q96RN5 788 aa15.79■□□□□ 0.12
PTPN7-216ENST00000492977 PLIN2Q99541 437 aa15.79■□□□□ 0.12
PTPN7-216ENST00000492977 KCNMB3Q9NPA1 279 aa15.79■□□□□ 0.12
PTPN7-216ENST00000492977 ZNF112Q9UJU3 913 aa15.79■□□□□ 0.12
PTPN7-216ENST00000492977 PPP2R3BQ9Y5P8 575 aa15.79■□□□□ 0.12
PTPN7-216ENST00000492977 ABCB11O95342 1321 aa15.78■□□□□ 0.12
PTPN7-216ENST00000492977 RHOBTB3O94955 611 aa15.78■□□□□ 0.12
PTPN7-216ENST00000492977 GRB10Q13322 594 aa15.78■□□□□ 0.12
PTPN7-216ENST00000492977 CCDC144BQ3MJ40 725 aa15.78■□□□□ 0.12
PTPN7-216ENST00000492977 PRPF38AQ8NAV1 312 aaKnown RBP15.78■□□□□ 0.12
PTPN7-216ENST00000492977 LRRC15Q8TF66 581 aa15.78■□□□□ 0.12
PTPN7-216ENST00000492977 CCDC47Q96A33 483 aaKnown RBP15.78■□□□□ 0.12
PTPN7-216ENST00000492977 CDK5RAP3Q96JB5 506 aa15.78■□□□□ 0.12
PTPN7-216ENST00000492977 P2RX7Q99572 595 aaKnown RBP15.78■□□□□ 0.12
PTPN7-216ENST00000492977 SYNRGQ9UMZ2 1314 aa15.77■□□□□ 0.12
PTPN7-216ENST00000492977 POTEMA6NI47 508 aa15.77■□□□□ 0.11
PTPN7-216ENST00000492977 GCOM1H8Y6P7 765 aaPredicted RBP15.77■□□□□ 0.11
PTPN7-216ENST00000492977 PITPNM1O00562 1244 aa15.77■□□□□ 0.11
PTPN7-216ENST00000492977 KLRC4O43908 158 aa15.77■□□□□ 0.11
PTPN7-216ENST00000492977 POLR2MP0CAP2 368 aa15.77■□□□□ 0.11
PTPN7-216ENST00000492977 CDK11BP21127 795 aaKnown RBP15.77■□□□□ 0.11
PTPN7-216ENST00000492977 USP14P54578 494 aa15.77■□□□□ 0.11
PTPN7-216ENST00000492977 KMT5BQ4FZB7 885 aa15.77■□□□□ 0.11
PTPN7-216ENST00000492977 ANGEL2Q5VTE6 544 aaKnown RBP15.77■□□□□ 0.11
PTPN7-216ENST00000492977 CCDC174Q6PII3 467 aa15.77■□□□□ 0.11
PTPN7-216ENST00000492977 SV2BQ7L1I2 683 aa15.77■□□□□ 0.11
PTPN7-216ENST00000492977 CCDC84Q86UT8 332 aaPredicted RBP15.77■□□□□ 0.11
PTPN7-216ENST00000492977 TRMT44Q8IYL2 757 aaKnown RBP15.77■□□□□ 0.11
PTPN7-216ENST00000492977 PNMA5Q96PV4 448 aa15.77■□□□□ 0.11
PTPN7-216ENST00000492977 TRIM9Q9C026 710 aa15.77■□□□□ 0.11
PTPN7-216ENST00000492977 LRRC27Q9C0I9 530 aa15.77■□□□□ 0.11
PTPN7-216ENST00000492977 RWDD2AQ9UIY3 292 aa15.77■□□□□ 0.11
PTPN7-216ENST00000492977 GOLGB1Q14789 3259 aaKnown RBP15.77■□□□□ 0.11
PTPN7-216ENST00000492977 TMEM119Q4V9L6 283 aa15.76■□□□□ 0.11
PTPN7-216ENST00000492977 HYIQ5T013 277 aa15.76■□□□□ 0.11
PTPN7-216ENST00000492977 KLHL10Q6JEL2 608 aa15.76■□□□□ 0.11
PTPN7-216ENST00000492977 LDHDQ86WU2 507 aa15.76■□□□□ 0.11
PTPN7-216ENST00000492977 LRRC8AQ8IWT6 810 aa15.76■□□□□ 0.11
PTPN7-216ENST00000492977 SMYD4Q8IYR2 804 aaPredicted RBP15.76■□□□□ 0.11
PTPN7-216ENST00000492977 KIAA1524Q8TCG1 905 aa15.76■□□□□ 0.11
PTPN7-216ENST00000492977 SNX29Q8TEQ0 813 aa15.76■□□□□ 0.11
PTPN7-216ENST00000492977 FAM20AQ96MK3 541 aa15.76■□□□□ 0.11
PTPN7-216ENST00000492977 SLF1Q9BQI6 1058 aa15.76■□□□□ 0.11
PTPN7-216ENST00000492977 WDR18Q9BV38 432 aa15.76■□□□□ 0.11
PTPN7-216ENST00000492977 EHMT1Q9H9B1 1298 aa15.76■□□□□ 0.11
PTPN7-216ENST00000492977 FBXO28Q9NVF7 368 aa15.76■□□□□ 0.11
PTPN7-216ENST00000492977 SBF1O95248 1867 aa15.76■□□□□ 0.11
PTPN7-216ENST00000492977 KDM3AQ9Y4C1 1321 aa15.76■□□□□ 0.11
PTPN7-216ENST00000492977 SMCHD1A6NHR9 2005 aa15.75■□□□□ 0.11
PTPN7-216ENST00000492977 ICAM1P05362 532 aa15.75■□□□□ 0.11
PTPN7-216ENST00000492977 HOXA7P31268 230 aaPredicted RBP15.75■□□□□ 0.11
PTPN7-216ENST00000492977 HOXA13P31271 388 aaPredicted RBP15.75■□□□□ 0.11
PTPN7-216ENST00000492977 INPP5BP32019 993 aa15.75■□□□□ 0.11
PTPN7-216ENST00000492977 PAK1Q13153 545 aa15.75■□□□□ 0.11
PTPN7-216ENST00000492977 CNNM4Q6P4Q7 775 aa15.75■□□□□ 0.11
PTPN7-216ENST00000492977 FILIP1Q7Z7B0 1213 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms