RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 REXO2Q9Y3B8 237 aaKnown RBP16.88■□□□□ 0.29
TNFRSF1B-203ENST00000492361 LRRC53A6NM62 1247 aa16.87■□□□□ 0.29
TNFRSF1B-203ENST00000492361 WHAMMP3Q1A5X7 153 aa16.87■□□□□ 0.29
TNFRSF1B-203ENST00000492361 LRRC15Q8TF66 581 aa16.87■□□□□ 0.29
TNFRSF1B-203ENST00000492361 COG1Q8WTW3 980 aa16.87■□□□□ 0.29
TNFRSF1B-203ENST00000492361 HDAC7Q8WUI4 952 aa16.87■□□□□ 0.29
TNFRSF1B-203ENST00000492361 LARP4BQ92615 738 aaKnown RBP16.87■□□□□ 0.29
TNFRSF1B-203ENST00000492361 TNFRSF25Q93038 417 aa16.87■□□□□ 0.29
TNFRSF1B-203ENST00000492361 LSM14BQ9BX40 385 aaKnown RBP16.87■□□□□ 0.29
TNFRSF1B-203ENST00000492361 RAB34Q9BZG1 259 aa16.87■□□□□ 0.29
TNFRSF1B-203ENST00000492361 CD209Q9NNX6 404 aa16.87■□□□□ 0.29
TNFRSF1B-203ENST00000492361 BAZ2AQ9UIF9 1905 aaKnown RBP16.87■□□□□ 0.29
TNFRSF1B-203ENST00000492361 PABPC4Q13310 644 aaKnown RBP eCLIP16.87■□□□□ 0.293e-6■■■□□ 18.8
TNFRSF1B-203ENST00000492361 BEND6Q5SZJ8 279 aaPredicted RBP16.87■□□□□ 0.29
TNFRSF1B-203ENST00000492361 CLEC4GQ6UXB4 293 aa16.87■□□□□ 0.29
TNFRSF1B-203ENST00000492361 SPATA20Q8TB22 786 aa16.87■□□□□ 0.29
TNFRSF1B-203ENST00000492361 NDST4Q9H3R1 872 aa16.87■□□□□ 0.29
TNFRSF1B-203ENST00000492361 POTEB2H3BUK9 544 aa16.87■□□□□ 0.29
TNFRSF1B-203ENST00000492361 EHHADHQ08426 723 aa16.87■□□□□ 0.29
TNFRSF1B-203ENST00000492361 TRIM14Q14142 442 aa16.87■□□□□ 0.29
TNFRSF1B-203ENST00000492361 GRM4Q14833 912 aa16.87■□□□□ 0.29
TNFRSF1B-203ENST00000492361 SHROOM1Q2M3G4 852 aaPredicted RBP16.87■□□□□ 0.29
TNFRSF1B-203ENST00000492361 PODXL2Q9NZ53 605 aa16.87■□□□□ 0.29
TNFRSF1B-203ENST00000492361 PCDHA12Q9UN75 941 aa16.87■□□□□ 0.29
TNFRSF1B-203ENST00000492361 USP17L10C9JJH3 530 aa16.86■□□□□ 0.29
TNFRSF1B-203ENST00000492361 PRR16Q569H4 304 aa16.86■□□□□ 0.29
TNFRSF1B-203ENST00000492361 ARL6IP4Q66PJ3 421 aaKnown RBP16.86■□□□□ 0.29
TNFRSF1B-203ENST00000492361 PLCD3Q8N3E9 789 aa16.86■□□□□ 0.29
TNFRSF1B-203ENST00000492361 NARFQ9UHQ1 456 aa16.86■□□□□ 0.29
TNFRSF1B-203ENST00000492361 COL1A1P02452 1464 aaPredicted RBP16.86■□□□□ 0.29
TNFRSF1B-203ENST00000492361 UBAP1LF5GYI3 381 aa16.86■□□□□ 0.29
TNFRSF1B-203ENST00000492361 ALS2CR12Q96Q35 445 aa16.86■□□□□ 0.29
TNFRSF1B-203ENST00000492361 DBNDD1Q9H9R9 158 aa16.86■□□□□ 0.29
TNFRSF1B-203ENST00000492361 ADAMTS1Q9UHI8 967 aa16.86■□□□□ 0.29
TNFRSF1B-203ENST00000492361 CAPN6Q9Y6Q1 641 aa16.86■□□□□ 0.29
TNFRSF1B-203ENST00000492361 NWD2Q9ULI1 1742 aa16.86■□□□□ 0.29
TNFRSF1B-203ENST00000492361 GDF11O95390 407 aa16.86■□□□□ 0.29
TNFRSF1B-203ENST00000492361 USP8P40818 1118 aa16.86■□□□□ 0.29
TNFRSF1B-203ENST00000492361 KIF11P52732 1056 aa16.86■□□□□ 0.29
TNFRSF1B-203ENST00000492361 NAA35Q5VZE5 725 aa16.86■□□□□ 0.29
TNFRSF1B-203ENST00000492361 SCAF8Q9UPN6 1271 aaKnown RBP16.86■□□□□ 0.29
TNFRSF1B-203ENST00000492361 PCDHB13Q9Y5F0 798 aa16.86■□□□□ 0.29
TNFRSF1B-203ENST00000492361 MAP9Q49MG5 647 aa16.85■□□□□ 0.29
TNFRSF1B-203ENST00000492361 KCNK18Q7Z418 384 aa16.85■□□□□ 0.29
TNFRSF1B-203ENST00000492361 MAATS1Q7Z4T9 603 aa16.85■□□□□ 0.29
TNFRSF1B-203ENST00000492361 DDX25Q9UHL0 483 aaKnown RBP16.85■□□□□ 0.29
TNFRSF1B-203ENST00000492361 LCMT1Q9UIC8 334 aa16.85■□□□□ 0.29
TNFRSF1B-203ENST00000492361 CLIC2O15247 247 aa16.85■□□□□ 0.29
TNFRSF1B-203ENST00000492361 EEF1GP26641 437 aaKnown RBP16.85■□□□□ 0.29
TNFRSF1B-203ENST00000492361 HOXA13P31271 388 aaPredicted RBP16.85■□□□□ 0.29
TNFRSF1B-203ENST00000492361 GPBP1Q86WP2 473 aa16.85■□□□□ 0.29
TNFRSF1B-203ENST00000492361 FAM133AQ8N9E0 248 aa16.85■□□□□ 0.29
TNFRSF1B-203ENST00000492361 DUSP9Q99956 384 aaKnown RBP16.85■□□□□ 0.29
TNFRSF1B-203ENST00000492361 LRRC1Q9BTT6 524 aa16.85■□□□□ 0.29
TNFRSF1B-203ENST00000492361 ZBTB21Q9ULJ3 1066 aa16.85■□□□□ 0.29
TNFRSF1B-203ENST00000492361 HYOU1Q9Y4L1 999 aa16.85■□□□□ 0.29
TNFRSF1B-203ENST00000492361 PDE2AO00408 941 aaPredicted RBP16.84■□□□□ 0.29
TNFRSF1B-203ENST00000492361 ATP2C2O75185 946 aa16.84■□□□□ 0.29
TNFRSF1B-203ENST00000492361 GGCXP38435 758 aa16.84■□□□□ 0.29
TNFRSF1B-203ENST00000492361 IRX5P78411 483 aaPredicted RBP16.84■□□□□ 0.29
TNFRSF1B-203ENST00000492361 TTI2Q6NXR4 508 aa16.84■□□□□ 0.29
TNFRSF1B-203ENST00000492361 WDR59Q6PJI9 974 aa16.84■□□□□ 0.29
TNFRSF1B-203ENST00000492361 PSTPIP2Q9H939 334 aa16.84■□□□□ 0.29
TNFRSF1B-203ENST00000492361 KCND1Q9NSA2 647 aa16.84■□□□□ 0.29
TNFRSF1B-203ENST00000492361 ATRNO75882 1429 aa16.84■□□□□ 0.29
TNFRSF1B-203ENST00000492361 POTEB3A0JP26 581 aa16.84■□□□□ 0.29
TNFRSF1B-203ENST00000492361 POTECB2RU33 542 aa16.84■□□□□ 0.29
TNFRSF1B-203ENST00000492361 HPDP32754 393 aaPredicted RBP16.84■□□□□ 0.29
TNFRSF1B-203ENST00000492361 POTEBQ6S5H4 581 aa16.84■□□□□ 0.29
TNFRSF1B-203ENST00000492361 TBC1D5Q92609 795 aa16.84■□□□□ 0.29
TNFRSF1B-203ENST00000492361 SEMA6BQ9H3T3 888 aa16.84■□□□□ 0.29
TNFRSF1B-203ENST00000492361 PANK4Q9NVE7 773 aa16.84■□□□□ 0.29
TNFRSF1B-203ENST00000492361 PCDHA13Q9Y5I0 950 aa16.84■□□□□ 0.29
TNFRSF1B-203ENST00000492361 ABCC6O95255 1503 aa16.84■□□□□ 0.29
TNFRSF1B-203ENST00000492361 DDX39AO00148 427 aaKnown RBP16.84■□□□□ 0.29
TNFRSF1B-203ENST00000492361 SLC1A4P43007 532 aa16.84■□□□□ 0.29
TNFRSF1B-203ENST00000492361 SAMM50Q9Y512 469 aa16.84■□□□□ 0.29
TNFRSF1B-203ENST00000492361 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.84■□□□□ 0.29
TNFRSF1B-203ENST00000492361 GOLGA6BA6NDN3 693 aa16.83■□□□□ 0.29
TNFRSF1B-203ENST00000492361 RPS6KA4O75676 772 aa16.83■□□□□ 0.29
TNFRSF1B-203ENST00000492361 MYBL2P10244 700 aa16.83■□□□□ 0.29
TNFRSF1B-203ENST00000492361 ZBED6P86452 979 aa16.83■□□□□ 0.29
TNFRSF1B-203ENST00000492361 CKAP4Q07065 602 aaKnown RBP16.83■□□□□ 0.29
TNFRSF1B-203ENST00000492361 AFAP1L1Q8TED9 768 aa16.83■□□□□ 0.29
TNFRSF1B-203ENST00000492361 EHD4Q9H223 541 aa16.83■□□□□ 0.29
TNFRSF1B-203ENST00000492361 N4BP2Q86UW6 1770 aaPredicted RBP16.83■□□□□ 0.28
TNFRSF1B-203ENST00000492361 SMIM23A6NLE4 172 aa16.83■□□□□ 0.28
TNFRSF1B-203ENST00000492361 ODF2Q5BJF6 829 aa16.83■□□□□ 0.28
TNFRSF1B-203ENST00000492361 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.83■□□□□ 0.28
TNFRSF1B-203ENST00000492361 KIAA0895Q8NCT3 520 aa16.83■□□□□ 0.28
TNFRSF1B-203ENST00000492361 GIMAP8Q8ND71 665 aaPredicted RBP16.83■□□□□ 0.28
TNFRSF1B-203ENST00000492361 CAPN11Q9UMQ6 739 aa16.83■□□□□ 0.28
TNFRSF1B-203ENST00000492361 TRPM3Q9HCF6 1732 aaPredicted RBP16.83■□□□□ 0.28
TNFRSF1B-203ENST00000492361 TAF1P21675 1872 aa16.83■□□□□ 0.28
TNFRSF1B-203ENST00000492361 ZSCAN5CA6NGD5 496 aaPredicted RBP16.83■□□□□ 0.28
TNFRSF1B-203ENST00000492361 ACTN1P12814 892 aa16.83■□□□□ 0.28
TNFRSF1B-203ENST00000492361 PBX1P40424 430 aa16.83■□□□□ 0.28
TNFRSF1B-203ENST00000492361 KIAA0753Q2KHM9 967 aa16.83■□□□□ 0.28
TNFRSF1B-203ENST00000492361 C8orf74Q6P047 294 aa16.83■□□□□ 0.28
TNFRSF1B-203ENST00000492361 TMED8Q6PL24 325 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms