RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 CDH23Q9H251 3354 aa9.78□□□□□ -0.84
SMARCB1-207ENST00000491967 MYH7BA7E2Y1 1941 aa9.78□□□□□ -0.84
SMARCB1-207ENST00000491967 TRIP12Q14669 1992 aaPredicted RBP9.78□□□□□ -0.84
SMARCB1-207ENST00000491967 PPP1R11O60927 126 aaPredicted RBP9.78□□□□□ -0.84
SMARCB1-207ENST00000491967 ARIH2O95376 493 aa9.78□□□□□ -0.84
SMARCB1-207ENST00000491967 CPT1AP50416 773 aa9.78□□□□□ -0.84
SMARCB1-207ENST00000491967 PSMC6P62333 389 aa9.78□□□□□ -0.84
SMARCB1-207ENST00000491967 PDE4DQ08499 809 aa9.78□□□□□ -0.84
SMARCB1-207ENST00000491967 TROAPQ12815 778 aa9.78□□□□□ -0.84
SMARCB1-207ENST00000491967 NFRKBQ6P4R8 1299 aa9.78□□□□□ -0.84
SMARCB1-207ENST00000491967 STOX1Q6ZVD7 989 aa9.78□□□□□ -0.84
SMARCB1-207ENST00000491967 FBXO11Q86XK2 927 aa9.78□□□□□ -0.84
SMARCB1-207ENST00000491967 MCF2L2Q86YR7 1114 aa9.78□□□□□ -0.84
SMARCB1-207ENST00000491967 PIAS4Q8N2W9 510 aaPredicted RBP9.78□□□□□ -0.84
SMARCB1-207ENST00000491967 RUFY2Q8WXA3 655 aa9.78□□□□□ -0.84
SMARCB1-207ENST00000491967 TAAR1Q96RJ0 339 aa9.78□□□□□ -0.84
SMARCB1-207ENST00000491967 MPHOSPH6Q99547 160 aaKnown RBP9.78□□□□□ -0.84
SMARCB1-207ENST00000491967 UBAC1Q9BSL1 405 aa9.78□□□□□ -0.84
SMARCB1-207ENST00000491967 MTG1Q9BT17 334 aaPredicted RBP9.78□□□□□ -0.84
SMARCB1-207ENST00000491967 WNT8AQ9H1J5 351 aa9.78□□□□□ -0.84
SMARCB1-207ENST00000491967 RIOX1Q9H6W3 641 aa9.78□□□□□ -0.84
SMARCB1-207ENST00000491967 IL23AQ9NPF7 189 aa9.78□□□□□ -0.84
SMARCB1-207ENST00000491967 MRPL11Q9Y3B7 192 aaKnown RBP9.78□□□□□ -0.84
SMARCB1-207ENST00000491967 TAF6LQ9Y6J9 622 aa9.78□□□□□ -0.84
SMARCB1-207ENST00000491967 U3KPZ7 1027 aaPredicted RBP9.78□□□□□ -0.84
SMARCB1-207ENST00000491967 CHD9Q3L8U1 2897 aa9.78□□□□□ -0.84
SMARCB1-207ENST00000491967 UMODL1Q5DID0 1318 aa9.78□□□□□ -0.84
SMARCB1-207ENST00000491967 TET1Q8NFU7 2136 aa9.77□□□□□ -0.84
SMARCB1-207ENST00000491967 KLRF2D3W0D1 207 aa9.77□□□□□ -0.85
SMARCB1-207ENST00000491967 ZBTB5O15062 677 aa9.77□□□□□ -0.85
SMARCB1-207ENST00000491967 SUPT20HL2P0C7V6 817 aa9.77□□□□□ -0.85
SMARCB1-207ENST00000491967 TXNP10599 105 aaKnown RBP9.77□□□□□ -0.85
SMARCB1-207ENST00000491967 HOXD8P13378 290 aaPredicted RBP9.77□□□□□ -0.85
SMARCB1-207ENST00000491967 CYP2C18P33260 490 aa9.77□□□□□ -0.85
SMARCB1-207ENST00000491967 PTPN11Q06124 597 aaPredicted RBP9.77□□□□□ -0.85
SMARCB1-207ENST00000491967 TTLL4Q14679 1199 aa9.77□□□□□ -0.85
SMARCB1-207ENST00000491967 GRM4Q14833 912 aa9.77□□□□□ -0.85
SMARCB1-207ENST00000491967 PPP2R5BQ15173 497 aa9.77□□□□□ -0.85
SMARCB1-207ENST00000491967 USH1GQ495M9 461 aa9.77□□□□□ -0.85
SMARCB1-207ENST00000491967 IFIT1BQ5T764 474 aaKnown RBP9.77□□□□□ -0.85
SMARCB1-207ENST00000491967 PSRC1Q6PGN9 363 aaPredicted RBP9.77□□□□□ -0.85
SMARCB1-207ENST00000491967 ZNF365Q70YC5 407 aa9.77□□□□□ -0.85
SMARCB1-207ENST00000491967 SESTD1Q86VW0 696 aa9.77□□□□□ -0.85
SMARCB1-207ENST00000491967 IGDCC4Q8TDY8 1250 aa9.77□□□□□ -0.85
SMARCB1-207ENST00000491967 EMID1Q96A84 441 aaPredicted RBP9.77□□□□□ -0.85
SMARCB1-207ENST00000491967 AMNQ9BXJ7 453 aa9.77□□□□□ -0.85
SMARCB1-207ENST00000491967 HIPK3Q9H422 1215 aa9.77□□□□□ -0.85
SMARCB1-207ENST00000491967 TTC28Q96AY4 2481 aa9.77□□□□□ -0.85
SMARCB1-207ENST00000491967 GBF1Q92538 1859 aa9.76□□□□□ -0.85
SMARCB1-207ENST00000491967 UNC80Q8N2C7 3258 aa9.76□□□□□ -0.85
SMARCB1-207ENST00000491967 PRUNE2Q8WUY3 3088 aa9.76□□□□□ -0.85
SMARCB1-207ENST00000491967 E7EWF7 191 aa9.76□□□□□ -0.85
SMARCB1-207ENST00000491967 CYTH3O43739 400 aa9.76□□□□□ -0.85
SMARCB1-207ENST00000491967 EIF3JO75822 258 aaKnown RBP9.76□□□□□ -0.85
SMARCB1-207ENST00000491967 RGS20O76081 388 aa9.76□□□□□ -0.85
SMARCB1-207ENST00000491967 DNAJB2P25686 324 aa9.76□□□□□ -0.85
SMARCB1-207ENST00000491967 ARHGAP1Q07960 439 aa9.76□□□□□ -0.85
SMARCB1-207ENST00000491967 STXBP2Q15833 593 aa9.76□□□□□ -0.85
SMARCB1-207ENST00000491967 NBPF20Q3BBV1 942 aa9.76□□□□□ -0.85
SMARCB1-207ENST00000491967 MB21D2Q8IYB1 491 aaPredicted RBP9.76□□□□□ -0.85
SMARCB1-207ENST00000491967 OR6J1Q8NGC5 347 aa9.76□□□□□ -0.85
SMARCB1-207ENST00000491967 KAT2BQ92831 832 aa9.76□□□□□ -0.85
SMARCB1-207ENST00000491967 COPS5Q92905 334 aa9.76□□□□□ -0.85
SMARCB1-207ENST00000491967 FAM161BQ96MY7 647 aa9.76□□□□□ -0.85
SMARCB1-207ENST00000491967 CTAGE1Q96RT6 745 aa9.76□□□□□ -0.85
SMARCB1-207ENST00000491967 RMDN3Q96TC7 470 aa9.76□□□□□ -0.85
SMARCB1-207ENST00000491967 MAP3K14Q99558 947 aa9.76□□□□□ -0.85
SMARCB1-207ENST00000491967 MTA3Q9BTC8 594 aa9.76□□□□□ -0.85
SMARCB1-207ENST00000491967 PPP1R12CQ9BZL4 782 aa9.76□□□□□ -0.85
SMARCB1-207ENST00000491967 SENP2Q9HC62 589 aa9.76□□□□□ -0.85
SMARCB1-207ENST00000491967 PXMP2Q9NR77 195 aa9.76□□□□□ -0.85
SMARCB1-207ENST00000491967 TRMT13Q9NUP7 481 aaKnown RBP9.76□□□□□ -0.85
SMARCB1-207ENST00000491967 CXXC1Q9P0U4 656 aaPredicted RBP9.76□□□□□ -0.85
SMARCB1-207ENST00000491967 DDX41Q9UJV9 622 aaKnown RBP9.76□□□□□ -0.85
SMARCB1-207ENST00000491967 SCN5AQ14524 2016 aa9.76□□□□□ -0.85
SMARCB1-207ENST00000491967 NCOR1O75376 2440 aa9.75□□□□□ -0.85
SMARCB1-207ENST00000491967 PITPNM1O00562 1244 aa9.75□□□□□ -0.85
SMARCB1-207ENST00000491967 FGBP02675 491 aa9.75□□□□□ -0.85
SMARCB1-207ENST00000491967 NR3C2P08235 984 aa9.75□□□□□ -0.85
SMARCB1-207ENST00000491967 PFKMP08237 780 aa9.75□□□□□ -0.85
SMARCB1-207ENST00000491967 ACRP10323 421 aa9.75□□□□□ -0.85
SMARCB1-207ENST00000491967 SMARCA1P28370 1054 aa9.75□□□□□ -0.85
SMARCB1-207ENST00000491967 ANTXR2P58335 489 aa9.75□□□□□ -0.85
SMARCB1-207ENST00000491967 RBL2Q08999 1139 aa9.75□□□□□ -0.85
SMARCB1-207ENST00000491967 TRDNQ13061 729 aa9.75□□□□□ -0.85
SMARCB1-207ENST00000491967 GRIN2CQ14957 1233 aa9.75□□□□□ -0.85
SMARCB1-207ENST00000491967 BRDTQ58F21 947 aaPredicted RBP9.75□□□□□ -0.85
SMARCB1-207ENST00000491967 VSIG10LQ86VR7 867 aa9.75□□□□□ -0.85
SMARCB1-207ENST00000491967 RPUSD2Q8IZ73 545 aaKnown RBP9.75□□□□□ -0.85
SMARCB1-207ENST00000491967 NCOA7Q8NI08 942 aa9.75□□□□□ -0.85
SMARCB1-207ENST00000491967 PBX4Q9BYU1 374 aa9.75□□□□□ -0.85
SMARCB1-207ENST00000491967 ZNF576Q9H609 170 aa9.75□□□□□ -0.85
SMARCB1-207ENST00000491967 VAT1LQ9HCJ6 419 aa9.75□□□□□ -0.85
SMARCB1-207ENST00000491967 PCDHA1Q9Y5I3 950 aa9.75□□□□□ -0.85
SMARCB1-207ENST00000491967 EYSQ5T1H1 3165 aa9.75□□□□□ -0.85
SMARCB1-207ENST00000491967 CHD7Q9P2D1 2997 aa9.74□□□□□ -0.85
SMARCB1-207ENST00000491967 PNMA6FA0A0J9YX94 578 aa9.74□□□□□ -0.85
SMARCB1-207ENST00000491967 GRXCR1A8MXD5 290 aa9.74□□□□□ -0.85
SMARCB1-207ENST00000491967 HAS3O00219 553 aa9.74□□□□□ -0.85
SMARCB1-207ENST00000491967 IFIT3O14879 490 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms