RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 GRB10Q13322 594 aa17.05■□□□□ 0.32
SSR4-212ENST00000491833 TTBK2Q6IQ55 1244 aa17.05■□□□□ 0.32
SSR4-212ENST00000491833 RNF207Q6ZRF8 634 aa17.05■□□□□ 0.32
SSR4-212ENST00000491833 LRFN3Q9BTN0 628 aa17.05■□□□□ 0.32
SSR4-212ENST00000491833 EPHX3Q9H6B9 360 aa17.05■□□□□ 0.32
SSR4-212ENST00000491833 PNMA2Q9UL42 364 aa17.05■□□□□ 0.32
SSR4-212ENST00000491833 ARIH1Q9Y4X5 557 aaPredicted RBP17.05■□□□□ 0.32
SSR4-212ENST00000491833 PTPRSQ13332 1948 aa17.05■□□□□ 0.32
SSR4-212ENST00000491833 FRMPD2Q68DX3 1309 aaPredicted RBP17.04■□□□□ 0.32
SSR4-212ENST00000491833 A6NJR5 290 aa17.04■□□□□ 0.32
SSR4-212ENST00000491833 TMEM31Q5JXX7 168 aa17.04■□□□□ 0.32
SSR4-212ENST00000491833 C20orf194Q5TEA3 1177 aa17.04■□□□□ 0.32
SSR4-212ENST00000491833 DNERQ8NFT8 737 aa17.04■□□□□ 0.32
SSR4-212ENST00000491833 PI4K2BQ8TCG2 481 aa17.04■□□□□ 0.32
SSR4-212ENST00000491833 PPP1R13LQ8WUF5 828 aa17.04■□□□□ 0.32
SSR4-212ENST00000491833 ANAPC4Q9UJX5 808 aa17.04■□□□□ 0.32
SSR4-212ENST00000491833 RCAN3Q9UKA8 241 aa17.04■□□□□ 0.32
SSR4-212ENST00000491833 FOXP2O15409 715 aa17.03■□□□□ 0.32
SSR4-212ENST00000491833 ORC4O43929 436 aa17.03■□□□□ 0.32
SSR4-212ENST00000491833 EDNRBP24530 442 aa17.03■□□□□ 0.32
SSR4-212ENST00000491833 CAGE1Q8TC20 777 aa17.03■□□□□ 0.32
SSR4-212ENST00000491833 AFAP1L1Q8TED9 768 aa17.03■□□□□ 0.32
SSR4-212ENST00000491833 CLEC4DQ8WXI8 215 aa17.03■□□□□ 0.32
SSR4-212ENST00000491833 COPS5Q92905 334 aa17.03■□□□□ 0.32
SSR4-212ENST00000491833 INCENPQ9NQS7 918 aa17.03■□□□□ 0.32
SSR4-212ENST00000491833 TOMM22Q9NS69 142 aa17.03■□□□□ 0.32
SSR4-212ENST00000491833 TRANK1O15050 2925 aa17.03■□□□□ 0.32
SSR4-212ENST00000491833 WDR19Q8NEZ3 1342 aa17.02■□□□□ 0.32
SSR4-212ENST00000491833 B4DLN1 442 aa17.02■□□□□ 0.32
SSR4-212ENST00000491833 TXNP10599 105 aaKnown RBP17.02■□□□□ 0.32
SSR4-212ENST00000491833 TOP1P11387 765 aaKnown RBP17.02■□□□□ 0.32
SSR4-212ENST00000491833 MRPL12P52815 198 aaKnown RBP17.02■□□□□ 0.32
SSR4-212ENST00000491833 CHMP4BP1P59074 171 aa17.02■□□□□ 0.32
SSR4-212ENST00000491833 WDR5P61964 334 aaKnown RBP17.02■□□□□ 0.32
SSR4-212ENST00000491833 RPS6P62753 249 aaKnown RBP17.02■□□□□ 0.32
SSR4-212ENST00000491833 PTGISQ16647 500 aa17.02■□□□□ 0.32
SSR4-212ENST00000491833 GDPD5Q8WTR4 605 aa17.02■□□□□ 0.32
SSR4-212ENST00000491833 GPCPD1Q9NPB8 672 aa17.02■□□□□ 0.32
SSR4-212ENST00000491833 LPXNO60711 386 aa17.01■□□□□ 0.31
SSR4-212ENST00000491833 SPRED2Q7Z698 418 aa17.01■□□□□ 0.31
SSR4-212ENST00000491833 TET1Q8NFU7 2136 aa17.01■□□□□ 0.31
SSR4-212ENST00000491833 TMEM47Q9BQJ4 181 aa17.01■□□□□ 0.31
SSR4-212ENST00000491833 ZBED2Q9BTP6 218 aa17.01■□□□□ 0.31
SSR4-212ENST00000491833 LMCD1Q9NZU5 365 aa17.01■□□□□ 0.31
SSR4-212ENST00000491833 LCHNA4D1U4 455 aa17■□□□□ 0.31
SSR4-212ENST00000491833 PDHBP11177 359 aa17■□□□□ 0.31
SSR4-212ENST00000491833 RRP12Q5JTH9 1297 aaKnown RBP17■□□□□ 0.31
SSR4-212ENST00000491833 VPS53Q5VIR6 699 aa17■□□□□ 0.31
SSR4-212ENST00000491833 CNKSR3Q6P9H4 555 aa17■□□□□ 0.31
SSR4-212ENST00000491833 LRRC8DQ7L1W4 858 aa17■□□□□ 0.31
SSR4-212ENST00000491833 SIP14410 1827 aa16.99■□□□□ 0.31
SSR4-212ENST00000491833 GPR37L1O60883 481 aa16.99■□□□□ 0.31
SSR4-212ENST00000491833 ARIH2O95376 493 aa16.99■□□□□ 0.31
SSR4-212ENST00000491833 PARNO95453 639 aaKnown RBP16.99■□□□□ 0.31
SSR4-212ENST00000491833 MMP3P08254 477 aa16.99■□□□□ 0.31
SSR4-212ENST00000491833 FGRP09769 529 aa16.99■□□□□ 0.31
SSR4-212ENST00000491833 SELPP16109 830 aa16.99■□□□□ 0.31
SSR4-212ENST00000491833 MX1P20591 662 aa16.99■□□□□ 0.31
SSR4-212ENST00000491833 SESTD1Q86VW0 696 aa16.99■□□□□ 0.31
SSR4-212ENST00000491833 OTUD7AQ8TE49 926 aaPredicted RBP16.99■□□□□ 0.31
SSR4-212ENST00000491833 TCP11L1Q9NUJ3 509 aa16.99■□□□□ 0.31
SSR4-212ENST00000491833 GH1P01241 217 aa16.98■□□□□ 0.31
SSR4-212ENST00000491833 DEFB103AP81534 67 aa16.98■□□□□ 0.31
SSR4-212ENST00000491833 RBL2Q08999 1139 aa16.98■□□□□ 0.31
SSR4-212ENST00000491833 ZNF543Q08ER8 600 aa16.98■□□□□ 0.31
SSR4-212ENST00000491833 USH1GQ495M9 461 aa16.98■□□□□ 0.31
SSR4-212ENST00000491833 GDF6Q6KF10 455 aaPredicted RBP16.98■□□□□ 0.31
SSR4-212ENST00000491833 TMCO2Q7Z6W1 182 aaPredicted RBP16.98■□□□□ 0.31
SSR4-212ENST00000491833 MTUS1Q9ULD2 1270 aa16.98■□□□□ 0.31
SSR4-212ENST00000491833 TRIP12Q14669 1992 aaPredicted RBP16.98■□□□□ 0.31
SSR4-212ENST00000491833 FAM86C2PA6NEL3 165 aa16.97■□□□□ 0.31
SSR4-212ENST00000491833 GJB5O95377 273 aa16.97■□□□□ 0.31
SSR4-212ENST00000491833 CXCL10P02778 98 aa16.97■□□□□ 0.31
SSR4-212ENST00000491833 ALX1Q15699 326 aa16.97■□□□□ 0.31
SSR4-212ENST00000491833 AFG1LQ8WV93 481 aa16.97■□□□□ 0.31
SSR4-212ENST00000491833 DHX38Q92620 1227 aaKnown RBP16.97■□□□□ 0.31
SSR4-212ENST00000491833 KHSRPQ92945 711 aaKnown RBP eCLIP16.97■□□□□ 0.31
SSR4-212ENST00000491833 TGS1Q96RS0 853 aaKnown RBP16.97■□□□□ 0.31
SSR4-212ENST00000491833 CTAGE1Q96RT6 745 aa16.97■□□□□ 0.31
SSR4-212ENST00000491833 UBE2ZQ9H832 354 aaPredicted RBP16.97■□□□□ 0.31
SSR4-212ENST00000491833 C11orf16Q9NQ32 467 aa16.97■□□□□ 0.31
SSR4-212ENST00000491833 EFCAB14O75071 495 aa16.96■□□□□ 0.31
SSR4-212ENST00000491833 SNHG28P0DPA3 235 aa16.96■□□□□ 0.31
SSR4-212ENST00000491833 CASTP20810 708 aaKnown RBP16.96■□□□□ 0.31
SSR4-212ENST00000491833 ARHGAP1Q07960 439 aa16.96■□□□□ 0.31
SSR4-212ENST00000491833 CCDC62Q6P9F0 684 aa16.96■□□□□ 0.31
SSR4-212ENST00000491833 RGS22Q8NE09 1264 aa16.96■□□□□ 0.31
SSR4-212ENST00000491833 CRBNQ96SW2 442 aa16.96■□□□□ 0.31
SSR4-212ENST00000491833 RAD9AQ99638 391 aa16.96■□□□□ 0.31
SSR4-212ENST00000491833 KATNAL1Q9BW62 490 aa16.96■□□□□ 0.31
SSR4-212ENST00000491833 HELLSQ9NRZ9 838 aa16.96■□□□□ 0.31
SSR4-212ENST00000491833 GTF2IRD1Q9UHL9 959 aa16.96■□□□□ 0.31
SSR4-212ENST00000491833 ZMYM6O95789 1325 aa16.96■□□□□ 0.3
SSR4-212ENST00000491833 ABHD14A-ACY1A0A1B0GW23 586 aa16.95■□□□□ 0.3
SSR4-212ENST00000491833 LINC01553A4QN01 128 aa16.95■□□□□ 0.3
SSR4-212ENST00000491833 NBNO60934 754 aa16.95■□□□□ 0.3
SSR4-212ENST00000491833 CKBP12277 381 aa16.95■□□□□ 0.3
SSR4-212ENST00000491833 ERVK-21P61565 698 aa16.95■□□□□ 0.3
SSR4-212ENST00000491833 GPNMBQ14956 572 aa16.95■□□□□ 0.3
SSR4-212ENST00000491833 LY6KQ17RY6 165 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms