RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 G6PC3Q9BUM1 346 aa5.98□□□□□ -1.45
RTN4-215ENST00000491592 RC3H2Q9HBD1 1191 aaKnown RBP5.98□□□□□ -1.45
RTN4-215ENST00000491592 CYP26B1Q9NR63 512 aa5.98□□□□□ -1.45
RTN4-215ENST00000491592 GNL3LQ9NVN8 582 aaKnown RBP5.98□□□□□ -1.45
RTN4-215ENST00000491592 MRPL42Q9Y6G3 142 aaKnown RBP5.98□□□□□ -1.45
RTN4-215ENST00000491592 PRODHO43272 600 aa5.97□□□□□ -1.45
RTN4-215ENST00000491592 PRC1O43663 620 aa5.97□□□□□ -1.45
RTN4-215ENST00000491592 USP2O75604 605 aaPredicted RBP5.97□□□□□ -1.45
RTN4-215ENST00000491592 SCG5P05408 212 aa5.97□□□□□ -1.45
RTN4-215ENST00000491592 THBDP07204 575 aa5.97□□□□□ -1.45
RTN4-215ENST00000491592 FAM153BP0C7A2 387 aa5.97□□□□□ -1.45
RTN4-215ENST00000491592 KCNJ6P48051 423 aa5.97□□□□□ -1.45
RTN4-215ENST00000491592 RHBDL3P58872 404 aa5.97□□□□□ -1.45
RTN4-215ENST00000491592 MAP4K2Q12851 820 aa5.97□□□□□ -1.45
RTN4-215ENST00000491592 MYBPC2Q14324 1141 aa5.97□□□□□ -1.45
RTN4-215ENST00000491592 SF1Q15637 639 aaKnown RBP5.97□□□□□ -1.45
RTN4-215ENST00000491592 LONRF2Q1L5Z9 754 aa5.97□□□□□ -1.45
RTN4-215ENST00000491592 PRSS53Q2L4Q9 553 aa5.97□□□□□ -1.45
RTN4-215ENST00000491592 TMEM67Q5HYA8 995 aa5.97□□□□□ -1.45
RTN4-215ENST00000491592 AMOTL1Q8IY63 956 aa5.97□□□□□ -1.45
RTN4-215ENST00000491592 TMEM145Q8NBT3 493 aa5.97□□□□□ -1.45
RTN4-215ENST00000491592 C1orf159Q96HA4 380 aa5.97□□□□□ -1.45
RTN4-215ENST00000491592 PTCHD1Q96NR3 888 aa5.97□□□□□ -1.45
RTN4-215ENST00000491592 RPS6KC1Q96S38 1066 aa5.97□□□□□ -1.45
RTN4-215ENST00000491592 ADAMTS10Q9H324 1103 aa5.97□□□□□ -1.45
RTN4-215ENST00000491592 TMX1Q9H3N1 280 aa5.97□□□□□ -1.45
RTN4-215ENST00000491592 KANSL2Q9H9L4 492 aa5.97□□□□□ -1.45
RTN4-215ENST00000491592 PCDH12Q9NPG4 1184 aa5.97□□□□□ -1.45
RTN4-215ENST00000491592 C19orf73Q9NVV2 129 aa5.97□□□□□ -1.45
RTN4-215ENST00000491592 SWAP70Q9UH65 585 aa5.97□□□□□ -1.45
RTN4-215ENST00000491592 ERICH3Q5RHP9 1530 aa5.96□□□□□ -1.46
RTN4-215ENST00000491592 TRBV23-1A0A0A0MS06 115 aa5.96□□□□□ -1.46
RTN4-215ENST00000491592 PABPC1P11940 636 aaKnown RBP5.96□□□□□ -1.46
RTN4-215ENST00000491592 HOXC12P31275 282 aa5.96□□□□□ -1.46
RTN4-215ENST00000491592 ECI1P42126 302 aa5.96□□□□□ -1.46
RTN4-215ENST00000491592 HK2P52789 917 aa5.96□□□□□ -1.46
RTN4-215ENST00000491592 TBX4P57082 545 aa5.96□□□□□ -1.46
RTN4-215ENST00000491592 SQSTM1Q13501 440 aa5.96□□□□□ -1.46
RTN4-215ENST00000491592 FOXB2Q5VYV0 432 aa5.96□□□□□ -1.46
RTN4-215ENST00000491592 FILIP1Q7Z7B0 1213 aa5.96□□□□□ -1.46
RTN4-215ENST00000491592 ANKS4BQ8N8V4 417 aa5.96□□□□□ -1.46
RTN4-215ENST00000491592 ZSWIM2Q8NEG5 633 aa5.96□□□□□ -1.46
RTN4-215ENST00000491592 KCTD13Q8WZ19 329 aa5.96□□□□□ -1.46
RTN4-215ENST00000491592 OSBP2Q969R2 916 aa5.96□□□□□ -1.46
RTN4-215ENST00000491592 HHIPL1Q96JK4 782 aa5.96□□□□□ -1.46
RTN4-215ENST00000491592 EXOC2Q96KP1 924 aa5.96□□□□□ -1.46
RTN4-215ENST00000491592 CDC6Q99741 560 aa5.96□□□□□ -1.46
RTN4-215ENST00000491592 CLEC1BQ9P126 229 aa5.96□□□□□ -1.46
RTN4-215ENST00000491592 EBF1Q9UH73 591 aa5.96□□□□□ -1.46
RTN4-215ENST00000491592 TRBV23OR9-2A0A075B6M9 112 aa5.95□□□□□ -1.46
RTN4-215ENST00000491592 DLX3O60479 287 aa5.95□□□□□ -1.46
RTN4-215ENST00000491592 DNAJC6O75061 913 aa5.95□□□□□ -1.46
RTN4-215ENST00000491592 CPP00450 1065 aa5.95□□□□□ -1.46
RTN4-215ENST00000491592 CEBPAP49715 358 aaPredicted RBP5.95□□□□□ -1.46
RTN4-215ENST00000491592 CHRNEQ04844 493 aa5.95□□□□□ -1.46
RTN4-215ENST00000491592 CNGB1Q14028 1251 aaPredicted RBP5.95□□□□□ -1.46
RTN4-215ENST00000491592 ZC3H12BQ5HYM0 836 aaKnown RBP5.95□□□□□ -1.46
RTN4-215ENST00000491592 SLC35F1Q5T1Q4 408 aa5.95□□□□□ -1.46
RTN4-215ENST00000491592 ACBD5Q5T8D3 534 aaPredicted RBP5.95□□□□□ -1.46
RTN4-215ENST00000491592 NSMFQ6X4W1 530 aa5.95□□□□□ -1.46
RTN4-215ENST00000491592 PPIL6Q8IXY8 311 aa5.95□□□□□ -1.46
RTN4-215ENST00000491592 PDZD8Q8NEN9 1154 aa5.95□□□□□ -1.46
RTN4-215ENST00000491592 NPLOC4Q8TAT6 608 aa5.95□□□□□ -1.46
RTN4-215ENST00000491592 FRS2Q8WU20 508 aa5.95□□□□□ -1.46
RTN4-215ENST00000491592 LINC01599Q8WXQ3 324 aa5.95□□□□□ -1.46
RTN4-215ENST00000491592 RNPC3Q96LT9 517 aaKnown RBP5.95□□□□□ -1.46
RTN4-215ENST00000491592 CCDC140Q96MF4 163 aa5.95□□□□□ -1.46
RTN4-215ENST00000491592 SLC26A8Q96RN1 970 aa5.95□□□□□ -1.46
RTN4-215ENST00000491592 NAP1L4Q99733 375 aaKnown RBP5.95□□□□□ -1.46
RTN4-215ENST00000491592 SPC25Q9HBM1 224 aa5.95□□□□□ -1.46
RTN4-215ENST00000491592 GPRC5CQ9NQ84 441 aa5.95□□□□□ -1.46
RTN4-215ENST00000491592 TMEM260Q9NX78 707 aa5.95□□□□□ -1.46
RTN4-215ENST00000491592 TNFRSF10DQ9UBN6 386 aa5.95□□□□□ -1.46
RTN4-215ENST00000491592 G3BP2Q9UN86 482 aaKnown RBP5.95□□□□□ -1.46
RTN4-215ENST00000491592 RPS6KL1Q9Y6S9 549 aa5.95□□□□□ -1.46
RTN4-215ENST00000491592 FITM1A5D6W6 292 aa5.94□□□□□ -1.46
RTN4-215ENST00000491592 FADS2P1A8MWK0 482 aa5.94□□□□□ -1.46
RTN4-215ENST00000491592 PPP1R12AO14974 1030 aaPredicted RBP5.94□□□□□ -1.46
RTN4-215ENST00000491592 MEFVO15553 781 aaPredicted RBP5.94□□□□□ -1.46
RTN4-215ENST00000491592 PAPLNO95428 1278 aa5.94□□□□□ -1.46
RTN4-215ENST00000491592 PLS3P13797 630 aa5.94□□□□□ -1.46
RTN4-215ENST00000491592 PAMP19021 973 aa5.94□□□□□ -1.46
RTN4-215ENST00000491592 GDNFP39905 211 aa5.94□□□□□ -1.46
RTN4-215ENST00000491592 KIR2DL1P43626 348 aaPredicted RBP5.94□□□□□ -1.46
RTN4-215ENST00000491592 KIR2DL2P43627 348 aaPredicted RBP5.94□□□□□ -1.46
RTN4-215ENST00000491592 SUMO1P63165 101 aaKnown RBP5.94□□□□□ -1.46
RTN4-215ENST00000491592 KCNAB2Q13303 367 aa5.94□□□□□ -1.46
RTN4-215ENST00000491592 LAPTM5Q13571 262 aa5.94□□□□□ -1.46
RTN4-215ENST00000491592 FAM209AQ5JX71 171 aa5.94□□□□□ -1.46
RTN4-215ENST00000491592 RINLQ6ZS11 566 aa5.94□□□□□ -1.46
RTN4-215ENST00000491592 C11orf96Q7Z7L8 435 aa5.94□□□□□ -1.46
RTN4-215ENST00000491592 SLCO6A1Q86UG4 719 aa5.94□□□□□ -1.46
RTN4-215ENST00000491592 IFT57Q9NWB7 429 aa5.94□□□□□ -1.46
RTN4-215ENST00000491592 DDX56Q9NY93 547 aaKnown RBP5.94□□□□□ -1.46
RTN4-215ENST00000491592 CTNND2Q9UQB3 1225 aa5.94□□□□□ -1.46
RTN4-215ENST00000491592 MRPS23Q9Y3D9 190 aaKnown RBP5.94□□□□□ -1.46
RTN4-215ENST00000491592 NPHP3-ACAD11A0A0J9YXS1 232 aa5.93□□□□□ -1.46
RTN4-215ENST00000491592 ESYT3A0FGR9 886 aa5.93□□□□□ -1.46
RTN4-215ENST00000491592 TBC1D8O95759 1140 aa5.93□□□□□ -1.46
RTN4-215ENST00000491592 HPXP02790 462 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms