RNA–Protein interactions for RNA: ENST00000491390.1

NCSTN-214, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-214ENST00000491390 VPS53Q5VIR6 699 aa13.14□□□□□ -0.31
NCSTN-214ENST00000491390 TTBK2Q6IQ55 1244 aa13.14□□□□□ -0.31
NCSTN-214ENST00000491390 STAG1Q8WVM7 1258 aa13.14□□□□□ -0.31
NCSTN-214ENST00000491390 MFSD14AQ96MC6 490 aa13.14□□□□□ -0.31
NCSTN-214ENST00000491390 NACAP1Q9BZK3 213 aa13.14□□□□□ -0.31
NCSTN-214ENST00000491390 SUGCTQ9HAC7 445 aa13.14□□□□□ -0.31
NCSTN-214ENST00000491390 ZNF287Q9HBT7 754 aa13.14□□□□□ -0.31
NCSTN-214ENST00000491390 IL17RBQ9NRM6 502 aa13.14□□□□□ -0.31
NCSTN-214ENST00000491390 PCDHB15Q9Y5E8 787 aa13.14□□□□□ -0.31
NCSTN-214ENST00000491390 PLIN4Q96Q06 1357 aa13.14□□□□□ -0.31
NCSTN-214ENST00000491390 TSPY2A6NKD2 308 aa13.13□□□□□ -0.31
NCSTN-214ENST00000491390 KIF28PB7ZC32 967 aa13.13□□□□□ -0.31
NCSTN-214ENST00000491390 SLC16A2P36021 539 aa13.13□□□□□ -0.31
NCSTN-214ENST00000491390 CCDC96Q2M329 555 aa13.13□□□□□ -0.31
NCSTN-214ENST00000491390 NSMFQ6X4W1 530 aa13.13□□□□□ -0.31
NCSTN-214ENST00000491390 DEFB128Q7Z7B8 93 aa13.13□□□□□ -0.31
NCSTN-214ENST00000491390 FAM160B2Q86V87 743 aa13.13□□□□□ -0.31
NCSTN-214ENST00000491390 CHURC1Q8WUH1 139 aa13.13□□□□□ -0.31
NCSTN-214ENST00000491390 GMCL1Q96IK5 515 aa13.13□□□□□ -0.31
NCSTN-214ENST00000491390 ALG13Q9NP73 1137 aaKnown RBP13.13□□□□□ -0.31
NCSTN-214ENST00000491390 TRMT13Q9NUP7 481 aaKnown RBP13.13□□□□□ -0.31
NCSTN-214ENST00000491390 PRKAG3Q9UGI9 489 aa13.13□□□□□ -0.31
NCSTN-214ENST00000491390 PRR12Q9ULL5 1215 aa13.13□□□□□ -0.31
NCSTN-214ENST00000491390 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.13□□□□□ -0.31
NCSTN-214ENST00000491390 FRMPD2Q68DX3 1309 aaPredicted RBP13.13□□□□□ -0.31
NCSTN-214ENST00000491390 PITPNM1O00562 1244 aa13.12□□□□□ -0.31
NCSTN-214ENST00000491390 RANBP6O60518 1105 aaKnown RBP13.12□□□□□ -0.31
NCSTN-214ENST00000491390 BAIAP3O94812 1187 aa13.12□□□□□ -0.31
NCSTN-214ENST00000491390 SLC3A2P08195 630 aaKnown RBP13.12□□□□□ -0.31
NCSTN-214ENST00000491390 CYP2C9P11712 490 aa13.12□□□□□ -0.31
NCSTN-214ENST00000491390 PTPN5P54829 565 aa13.12□□□□□ -0.31
NCSTN-214ENST00000491390 ERVK-21P61565 698 aa13.12□□□□□ -0.31
NCSTN-214ENST00000491390 TAPT1Q6NXT6 567 aa13.12□□□□□ -0.31
NCSTN-214ENST00000491390 AP5M1Q9H0R1 490 aa13.12□□□□□ -0.31
NCSTN-214ENST00000491390 CYP39A1Q9NYL5 469 aa13.12□□□□□ -0.31
NCSTN-214ENST00000491390 CCPG1Q9ULG6 757 aa13.12□□□□□ -0.31
NCSTN-214ENST00000491390 TNKSO95271 1327 aa13.12□□□□□ -0.31
NCSTN-214ENST00000491390 ASB14A6NK59 587 aa13.11□□□□□ -0.31
NCSTN-214ENST00000491390 SUPT20HL2P0C7V6 817 aa13.11□□□□□ -0.31
NCSTN-214ENST00000491390 TCF15Q12870 199 aa13.11□□□□□ -0.31
NCSTN-214ENST00000491390 RRP12Q5JTH9 1297 aaKnown RBP13.11□□□□□ -0.31
NCSTN-214ENST00000491390 RCSD1Q6JBY9 416 aa13.11□□□□□ -0.31
NCSTN-214ENST00000491390 KIAA1211Q6ZU35 1233 aa13.11□□□□□ -0.31
NCSTN-214ENST00000491390 BMP8AQ7Z5Y6 402 aa13.11□□□□□ -0.31
NCSTN-214ENST00000491390 TET1Q8NFU7 2136 aa13.11□□□□□ -0.31
NCSTN-214ENST00000491390 GPCPD1Q9NPB8 672 aa13.11□□□□□ -0.31
NCSTN-214ENST00000491390 SYNPO2Q9UMS6 1093 aa13.11□□□□□ -0.31
NCSTN-214ENST00000491390 Q9Y3F1 56 aa13.11□□□□□ -0.31
NCSTN-214ENST00000491390 DMXL1Q9Y485 3027 aa13.11□□□□□ -0.31
NCSTN-214ENST00000491390 TTC41PQ6P2S7 1318 aa13.11□□□□□ -0.31
NCSTN-214ENST00000491390 NFIBO00712 420 aa13.1□□□□□ -0.31
NCSTN-214ENST00000491390 IQCF3P0C7M6 154 aa13.1□□□□□ -0.31
NCSTN-214ENST00000491390 IRS1P35568 1242 aa13.1□□□□□ -0.31
NCSTN-214ENST00000491390 BAATQ14032 418 aaPredicted RBP13.1□□□□□ -0.31
NCSTN-214ENST00000491390 TKFCQ3LXA3 575 aa13.1□□□□□ -0.31
NCSTN-214ENST00000491390 HERC4Q5GLZ8 1057 aaPredicted RBP13.1□□□□□ -0.31
NCSTN-214ENST00000491390 IER5LQ5T953 404 aa13.1□□□□□ -0.31
NCSTN-214ENST00000491390 ADHFE1Q8IWW8 467 aa13.1□□□□□ -0.31
NCSTN-214ENST00000491390 TOMM22Q9NS69 142 aa13.1□□□□□ -0.31
NCSTN-214ENST00000491390 SIP14410 1827 aa13.1□□□□□ -0.31
NCSTN-214ENST00000491390 ZFHX4Q86UP3 3567 aa13.1□□□□□ -0.31
NCSTN-214ENST00000491390 PTPRZ1P23471 2315 aaPredicted RBP13.1□□□□□ -0.31
NCSTN-214ENST00000491390 LINC01553A4QN01 128 aa13.09□□□□□ -0.31
NCSTN-214ENST00000491390 ZEB2O60315 1214 aa13.09□□□□□ -0.31
NCSTN-214ENST00000491390 MYL3P08590 195 aa13.09□□□□□ -0.31
NCSTN-214ENST00000491390 FDX1P10109 184 aa13.09□□□□□ -0.31
NCSTN-214ENST00000491390 MX1P20591 662 aa13.09□□□□□ -0.31
NCSTN-214ENST00000491390 WDR5P61964 334 aaKnown RBP13.09□□□□□ -0.31
NCSTN-214ENST00000491390 LRRFIP1Q32MZ4 808 aaKnown RBP13.09□□□□□ -0.31
NCSTN-214ENST00000491390 SLC30A10Q6XR72 485 aa13.09□□□□□ -0.31
NCSTN-214ENST00000491390 TGS1Q96RS0 853 aaKnown RBP13.09□□□□□ -0.31
NCSTN-214ENST00000491390 NCOR2Q9Y618 2525 aa13.08□□□□□ -0.32
NCSTN-214ENST00000491390 PTPDC1A2A3K4 754 aa13.08□□□□□ -0.32
NCSTN-214ENST00000491390 H3BQ06 376 aaPredicted RBP13.08□□□□□ -0.32
NCSTN-214ENST00000491390 GFRA3O60609 400 aa13.08□□□□□ -0.32
NCSTN-214ENST00000491390 PLA2G6O60733 806 aa13.08□□□□□ -0.32
NCSTN-214ENST00000491390 CALML3P27482 149 aa13.08□□□□□ -0.32
NCSTN-214ENST00000491390 ALDH5A1P51649 535 aaPredicted RBP13.08□□□□□ -0.32
NCSTN-214ENST00000491390 HAND2P61296 217 aa13.08□□□□□ -0.32
NCSTN-214ENST00000491390 GPNMBQ14956 572 aa13.08□□□□□ -0.32
NCSTN-214ENST00000491390 SYDE2Q5VT97 1194 aa13.08□□□□□ -0.32
NCSTN-214ENST00000491390 IQSEC1Q6DN90 963 aa13.08□□□□□ -0.32
NCSTN-214ENST00000491390 TMCO2Q7Z6W1 182 aaPredicted RBP13.08□□□□□ -0.32
NCSTN-214ENST00000491390 COPS5Q92905 334 aa13.08□□□□□ -0.32
NCSTN-214ENST00000491390 FAM227BQ96M60 508 aa13.08□□□□□ -0.32
NCSTN-214ENST00000491390 PRRX2Q99811 253 aa13.08□□□□□ -0.32
NCSTN-214ENST00000491390 RANBP17Q9H2T7 1088 aaKnown RBP13.08□□□□□ -0.32
NCSTN-214ENST00000491390 SCN10AQ9Y5Y9 1956 aa13.08□□□□□ -0.32
NCSTN-214ENST00000491390 DNAH14Q0VDD8 3507 aa13.08□□□□□ -0.32
NCSTN-214ENST00000491390 CHD6Q8TD26 2715 aa13.08□□□□□ -0.32
NCSTN-214ENST00000491390 KMT2EQ8IZD2 1858 aa13.08□□□□□ -0.32
NCSTN-214ENST00000491390 CACNA1BQ00975 2339 aa13.07□□□□□ -0.32
NCSTN-214ENST00000491390 A0A0D9SFI3 127 aa13.07□□□□□ -0.32
NCSTN-214ENST00000491390 GJB5O95377 273 aa13.07□□□□□ -0.32
NCSTN-214ENST00000491390 ICAM1P05362 532 aa13.07□□□□□ -0.32
NCSTN-214ENST00000491390 DEFB103AP81534 67 aa13.07□□□□□ -0.32
NCSTN-214ENST00000491390 PURAQ00577 322 aaKnown RBP13.07□□□□□ -0.32
NCSTN-214ENST00000491390 ANKRD45Q5TZF3 282 aa13.07□□□□□ -0.32
NCSTN-214ENST00000491390 RAD9AQ99638 391 aa13.07□□□□□ -0.32
NCSTN-214ENST00000491390 TMEM47Q9BQJ4 181 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms