RNA–Protein interactions for RNA: ENST00000491335.1

NDUFB4-204, Transcript of NADH:ubiquinone oxidoreductase subunit B4, humanhuman

TSL 2

Gene NDUFB4, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB4-204ENST00000491335 SEC63Q9UGP8 760 aaKnown RBP21.45■■□□□ 1.02
NDUFB4-204ENST00000491335 A0A1W2PQ45 241 aaPredicted RBP21.44■■□□□ 1.02
NDUFB4-204ENST00000491335 A0A1W2PQY0 241 aa21.44■■□□□ 1.02
NDUFB4-204ENST00000491335 hCG_1642624A0A1W2PR95 340 aa21.44■■□□□ 1.02
NDUFB4-204ENST00000491335 SYN1P17600 705 aa21.44■■□□□ 1.02
NDUFB4-204ENST00000491335 EIF2AK2P19525 551 aaKnown RBP21.44■■□□□ 1.02
NDUFB4-204ENST00000491335 RTP1P59025 263 aa21.44■■□□□ 1.02
NDUFB4-204ENST00000491335 NKX3-2P78367 333 aa21.44■■□□□ 1.02
NDUFB4-204ENST00000491335 BEX3Q00994 111 aa21.44■■□□□ 1.02
NDUFB4-204ENST00000491335 APOBRQ0VD83 1088 aa21.44■■□□□ 1.02
NDUFB4-204ENST00000491335 RTN1Q16799 776 aa21.44■■□□□ 1.02
NDUFB4-204ENST00000491335 DUSP28Q4G0W2 176 aa21.44■■□□□ 1.02
NDUFB4-204ENST00000491335 ARHGEF16Q5VV41 709 aa21.44■■□□□ 1.02
NDUFB4-204ENST00000491335 TLK2Q86UE8 772 aa21.44■■□□□ 1.02
NDUFB4-204ENST00000491335 IWS1Q96ST2 819 aa21.44■■□□□ 1.02
NDUFB4-204ENST00000491335 AP5M1Q9H0R1 490 aa21.44■■□□□ 1.02
NDUFB4-204ENST00000491335 PXMP2Q9NR77 195 aa21.44■■□□□ 1.02
NDUFB4-204ENST00000491335 NAP1L2Q9ULW6 460 aaPredicted RBP21.44■■□□□ 1.02
NDUFB4-204ENST00000491335 GCOM1H8Y6P7 765 aaPredicted RBP21.43■■□□□ 1.02
NDUFB4-204ENST00000491335 POLR2MP0CAP2 368 aa21.43■■□□□ 1.02
NDUFB4-204ENST00000491335 SNX17Q15036 470 aa21.43■■□□□ 1.02
NDUFB4-204ENST00000491335 PCSK9Q8NBP7 692 aaKnown RBP21.43■■□□□ 1.02
NDUFB4-204ENST00000491335 BRF1Q92994 677 aa21.43■■□□□ 1.02
NDUFB4-204ENST00000491335 FAM217BQ9NTX9 383 aaPredicted RBP21.43■■□□□ 1.02
NDUFB4-204ENST00000491335 RBM28Q9NW13 759 aaKnown RBP21.43■■□□□ 1.02
NDUFB4-204ENST00000491335 COLQQ9Y215 455 aaPredicted RBP21.43■■□□□ 1.02
NDUFB4-204ENST00000491335 ATP11BQ9Y2G3 1177 aa21.43■■□□□ 1.02
NDUFB4-204ENST00000491335 Q9Y3F1 56 aa21.43■■□□□ 1.02
NDUFB4-204ENST00000491335 MOXD2PA6NHM9 499 aa21.42■■□□□ 1.02
NDUFB4-204ENST00000491335 GOLGA8AA7E2F4 631 aa21.42■■□□□ 1.02
NDUFB4-204ENST00000491335 GOLGA8BA8MQT2 603 aa21.42■■□□□ 1.02
NDUFB4-204ENST00000491335 ASGR1P07306 291 aa21.42■■□□□ 1.02
NDUFB4-204ENST00000491335 NR3C2P08235 984 aa21.42■■□□□ 1.02
NDUFB4-204ENST00000491335 STXBP2Q15833 593 aa21.42■■□□□ 1.02
NDUFB4-204ENST00000491335 KIAA1217Q5T5P2 1943 aa21.42■■□□□ 1.02
NDUFB4-204ENST00000491335 FCHSD1Q86WN1 690 aa21.42■■□□□ 1.02
NDUFB4-204ENST00000491335 SCFD2Q8WU76 684 aa21.42■■□□□ 1.02
NDUFB4-204ENST00000491335 ZSWIM6Q9HCJ5 1215 aa21.42■■□□□ 1.02
NDUFB4-204ENST00000491335 CDC27P30260 824 aa21.41■■□□□ 1.02
NDUFB4-204ENST00000491335 FUT2Q10981 343 aa21.41■■□□□ 1.02
NDUFB4-204ENST00000491335 FSCN1Q16658 493 aaKnown RBP21.41■■□□□ 1.02
NDUFB4-204ENST00000491335 TRIM60Q495X7 471 aa21.41■■□□□ 1.02
NDUFB4-204ENST00000491335 C1orf53Q5VUE5 145 aa21.41■■□□□ 1.02
NDUFB4-204ENST00000491335 CHRDL2Q6WN34 429 aa21.41■■□□□ 1.02
NDUFB4-204ENST00000491335 SEPT14Q6ZU15 432 aa21.41■■□□□ 1.02
NDUFB4-204ENST00000491335 RUFY3Q7L099 469 aa21.41■■□□□ 1.02
NDUFB4-204ENST00000491335 FBXL16Q8N461 479 aa21.41■■□□□ 1.02
NDUFB4-204ENST00000491335 AGXT2Q9BYV1 514 aa21.41■■□□□ 1.02
NDUFB4-204ENST00000491335 STARD7Q9NQZ5 370 aa21.41■■□□□ 1.02
NDUFB4-204ENST00000491335 PCDH10Q9P2E7 1040 aa21.41■■□□□ 1.02
NDUFB4-204ENST00000491335 CNTNAP5Q8WYK1 1306 aa21.4■■□□□ 1.02
NDUFB4-204ENST00000491335 MYCLP12524 364 aaPredicted RBP21.4■■□□□ 1.02
NDUFB4-204ENST00000491335 RCAN1P53805 252 aa21.4■■□□□ 1.02
NDUFB4-204ENST00000491335 PPP2R5BQ15173 497 aa21.4■■□□□ 1.02
NDUFB4-204ENST00000491335 COPS5Q92905 334 aa21.4■■□□□ 1.02
NDUFB4-204ENST00000491335 VTI1AQ96AJ9 217 aa21.4■■□□□ 1.02
NDUFB4-204ENST00000491335 GLT1D1Q96MS3 346 aa21.4■■□□□ 1.02
NDUFB4-204ENST00000491335 PDCD2LQ9BRP1 358 aa21.4■■□□□ 1.02
NDUFB4-204ENST00000491335 EIF3JO75822 258 aaKnown RBP21.39■■□□□ 1.01
NDUFB4-204ENST00000491335 ARIH2O95376 493 aa21.39■■□□□ 1.01
NDUFB4-204ENST00000491335 TXNP10599 105 aaKnown RBP21.39■■□□□ 1.01
NDUFB4-204ENST00000491335 ADD1P35611 737 aaKnown RBP21.39■■□□□ 1.01
NDUFB4-204ENST00000491335 TLE2Q04725 743 aa21.39■■□□□ 1.01
NDUFB4-204ENST00000491335 TTLL4Q14679 1199 aa21.39■■□□□ 1.01
NDUFB4-204ENST00000491335 PGM5Q15124 567 aa21.39■■□□□ 1.01
NDUFB4-204ENST00000491335 USP17L6PQ6QN14 398 aa21.39■■□□□ 1.01
NDUFB4-204ENST00000491335 TM6SF1Q9BZW5 370 aa21.39■■□□□ 1.01
NDUFB4-204ENST00000491335 CYP46A1Q9Y6A2 500 aa21.39■■□□□ 1.01
NDUFB4-204ENST00000491335 V9GY48 417 aaPredicted RBP21.39■■□□□ 1.01
NDUFB4-204ENST00000491335 ELP1O95163 1332 aa21.38■■□□□ 1.01
NDUFB4-204ENST00000491335 NKRFO15226 690 aaKnown RBP eCLIP21.38■■□□□ 1.01
NDUFB4-204ENST00000491335 METAP2P50579 478 aaKnown RBP eCLIP21.38■■□□□ 1.01
NDUFB4-204ENST00000491335 CCDC62Q6P9F0 684 aa21.38■■□□□ 1.01
NDUFB4-204ENST00000491335 CXCL17Q6UXB2 119 aa21.38■■□□□ 1.01
NDUFB4-204ENST00000491335 VSIG10LQ86VR7 867 aa21.38■■□□□ 1.01
NDUFB4-204ENST00000491335 OR6J1Q8NGC5 347 aa21.38■■□□□ 1.01
NDUFB4-204ENST00000491335 IL31RAQ8NI17 732 aa21.38■■□□□ 1.01
NDUFB4-204ENST00000491335 SMARCC2Q8TAQ2 1214 aa21.38■■□□□ 1.01
NDUFB4-204ENST00000491335 GPKOWQ92917 476 aaPredicted RBP eCLIP21.38■■□□□ 1.01
NDUFB4-204ENST00000491335 TRIOBPQ9H2D6 2365 aa21.37■■□□□ 1.01
NDUFB4-204ENST00000491335 MEIS2O14770 477 aa21.37■■□□□ 1.01
NDUFB4-204ENST00000491335 ZEB2O60315 1214 aa21.37■■□□□ 1.01
NDUFB4-204ENST00000491335 HEATR3Q7Z4Q2 680 aa21.37■■□□□ 1.01
NDUFB4-204ENST00000491335 CUL5Q93034 780 aa21.37■■□□□ 1.01
NDUFB4-204ENST00000491335 ZFP91Q96JP5 570 aaPredicted RBP21.37■■□□□ 1.01
NDUFB4-204ENST00000491335 UPF3BQ9BZI7 483 aaKnown RBP21.37■■□□□ 1.01
NDUFB4-204ENST00000491335 PRO3102Q9H379 93 aa21.37■■□□□ 1.01
NDUFB4-204ENST00000491335 PSTPIP2Q9H939 334 aa21.37■■□□□ 1.01
NDUFB4-204ENST00000491335 RBM27Q9P2N5 1060 aaKnown RBP21.37■■□□□ 1.01
NDUFB4-204ENST00000491335 MYH7BA7E2Y1 1941 aa21.36■■□□□ 1.01
NDUFB4-204ENST00000491335 CCDC196A0A1B0GTZ2 297 aa21.36■■□□□ 1.01
NDUFB4-204ENST00000491335 PIK3CDO00329 1044 aa21.36■■□□□ 1.01
NDUFB4-204ENST00000491335 TOB2Q14106 344 aaPredicted RBP21.36■■□□□ 1.01
NDUFB4-204ENST00000491335 LY6KQ17RY6 165 aa21.36■■□□□ 1.01
NDUFB4-204ENST00000491335 HABP4Q5JVS0 413 aaKnown RBP21.36■■□□□ 1.01
NDUFB4-204ENST00000491335 GDF15Q99988 308 aa21.36■■□□□ 1.01
NDUFB4-204ENST00000491335 PQBP1O60828 265 aaKnown RBP21.35■■□□□ 1.01
NDUFB4-204ENST00000491335 RGS20O76081 388 aa21.35■■□□□ 1.01
NDUFB4-204ENST00000491335 PDIA3P30101 505 aaKnown RBP21.35■■□□□ 1.01
NDUFB4-204ENST00000491335 CCND2P30279 289 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms