RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	SCFD2	Q8WU76	684 aa		22.79	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	PPP1R13L	Q8WUF5	828 aa		22.79	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	ECHDC1	Q9NTX5	307 aa		22.79	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	ZBTB40	Q9NUA8	1239 aa		22.79	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	TET1	Q8NFU7	2136 aa		22.78	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	PTPDC1	A2A3K4	754 aa		22.78	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	CHMP4BP1	P59074	171 aa		22.78	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	PDE4D	Q08499	809 aa		22.78	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	PUS10	Q3MIT2	529 aa	Known RBP	22.78	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	22.78	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	CRBN	Q96SW2	442 aa		22.78	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	MTUS1	Q9ULD2	1270 aa		22.78	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	DDX19B	Q9UMR2	479 aa		22.78	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	ABHD14A-ACY1	A0A1B0GW23	586 aa		22.77	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	GJB5	O95377	273 aa		22.77	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	SELP	P16109	830 aa		22.77	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	CNKSR3	Q6P9H4	555 aa		22.77	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	TMCO2	Q7Z6W1	182 aa	Predicted RBP	22.77	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	KCNH6	Q9H252	994 aa		22.77	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	CHMP4B	Q9H444	224 aa	Known RBP	22.77	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334	SCN10A	Q9Y5Y9	1956 aa		22.77	■■□□□ 1.24
CDK5RAP2-218	ENST00000491334		B4DLN1	442 aa		22.76	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	EFCAB14	O75071	495 aa		22.76	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	TXN	P10599	105 aa	Known RBP	22.76	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	CALML3	P27482	149 aa		22.76	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	MRPL12	P52815	198 aa	Known RBP	22.76	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	PPARA	Q07869	468 aa		22.76	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	PTCRA	Q6ISU1	281 aa	Predicted RBP	22.76	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	NAPB	Q9H115	298 aa		22.76	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	RANBP17	Q9H2T7	1088 aa	Known RBP	22.76	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	TSPY2	A6NKD2	308 aa		22.75	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334		M0R2C6	588 aa		22.75	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	NFIB	O00712	420 aa		22.75	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	DEFB103A	P81534	67 aa		22.75	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	GPNMB	Q14956	572 aa		22.75	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	CCDC96	Q2M329	555 aa		22.75	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	LRRC8D	Q7L1W4	858 aa		22.75	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	COPS5	Q92905	334 aa		22.75	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	CTNNA3	Q9UI47	895 aa		22.75	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	PNMA2	Q9UL42	364 aa		22.75	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	MTMR7	Q9Y216	660 aa		22.75	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	LINC01553	A4QN01	128 aa		22.74	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	GRXCR2	A6NFK2	248 aa		22.74	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	IL9	P15248	144 aa		22.74	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	IKBKE	Q14164	716 aa		22.74	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	RNF207	Q6ZRF8	634 aa		22.74	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	SESTD1	Q86VW0	696 aa		22.74	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	DNER	Q8NFT8	737 aa		22.74	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	DCAF4	Q8WV16	495 aa		22.74	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	GPATCH3	Q96I76	525 aa		22.74	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	IL17RB	Q9NRM6	502 aa		22.74	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	SMARCA5	O60264	1052 aa	Predicted RBP	22.73	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	CXCL10	P02778	98 aa		22.73	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	SLC16A2	P36021	539 aa		22.73	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	NHLH1	Q02575	133 aa		22.73	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	BTNL9	Q6UXG8	535 aa		22.73	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	TRIP12	Q14669	1992 aa	Predicted RBP	22.72	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	DCX	O43602	365 aa		22.72	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	EDNRB	P24530	442 aa		22.72	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	SYDE2	Q5VT97	1194 aa		22.72	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	TTBK2	Q6IQ55	1244 aa		22.72	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	GDF6	Q6KF10	455 aa	Predicted RBP	22.72	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	FAM50B	Q9Y247	325 aa		22.72	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	INSL6	Q9Y581	213 aa		22.72	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	POTEB3	A0JP26	581 aa		22.71	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	NMT2	O60551	498 aa		22.71	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	RBL2	Q08999	1139 aa		22.71	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	PTPRO	Q16827	1216 aa		22.71	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	POTEB	Q6S5H4	581 aa		22.71	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	SLC30A10	Q6XR72	485 aa		22.71	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	FBXO22	Q8NEZ5	403 aa		22.71	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	CLEC4D	Q8WXI8	215 aa		22.71	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	FBXL18	Q96ME1	805 aa		22.71	■■□□□ 1.23
CDK5RAP2-218	ENST00000491334	NBN	O60934	754 aa		22.7	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	CKB	P12277	381 aa		22.7	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	CAST	P20810	708 aa	Known RBP	22.7	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	RPS6	P62753	249 aa	Known RBP	22.7	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	FAM117B	Q6P1L5	589 aa		22.7	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	NEK9	Q8TD19	979 aa		22.7	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	AFG1L	Q8WV93	481 aa		22.7	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	CTAGE1	Q96RT6	745 aa		22.7	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	22.7	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	TANC1	Q9C0D5	1861 aa		22.7	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	RANBP6	O60518	1105 aa	Known RBP	22.69	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	RASGRP2	Q7LDG7	609 aa		22.69	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	MRPL38	Q96DV4	380 aa	Known RBP	22.69	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	LCT	P09848	1927 aa		22.69	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	COL4A4	P53420	1690 aa	Predicted RBP	22.68	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	GH1	P01241	217 aa		22.68	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	NOV	P48745	357 aa		22.68	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	CCDC62	Q6P9F0	684 aa		22.68	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	C7orf31	Q8N865	590 aa		22.68	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	DHX38	Q92620	1227 aa	Known RBP	22.68	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	SEC62	Q99442	399 aa	Known RBP	22.68	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	UPF3B	Q9BZI7	483 aa	Known RBP	22.68	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	GPCPD1	Q9NPB8	672 aa		22.68	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	INCENP	Q9NQS7	918 aa		22.68	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	PRKAG3	Q9UGI9	489 aa		22.68	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	GTF2IRD1	Q9UHL9	959 aa		22.68	■■□□□ 1.22
CDK5RAP2-218	ENST00000491334	ARIH2	O95376	493 aa		22.67	■■□□□ 1.22

Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms