RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 NOL9Q5SY16 702 aaKnown RBP15.73■□□□□ 0.11
SMPD4-219ENST00000491128 POTEEQ6S8J3 1075 aa15.73■□□□□ 0.11
SMPD4-219ENST00000491128 MMTAG2Q9BU76 263 aaKnown RBP15.73■□□□□ 0.11
SMPD4-219ENST00000491128 NMRK2Q9NPI5 230 aa15.73■□□□□ 0.11
SMPD4-219ENST00000491128 GINM1Q9NU53 330 aa15.73■□□□□ 0.11
SMPD4-219ENST00000491128 PKD2L1Q9P0L9 805 aa15.73■□□□□ 0.11
SMPD4-219ENST00000491128 LRWD1Q9UFC0 647 aa15.73■□□□□ 0.11
SMPD4-219ENST00000491128 SLFN14P0C7P3 912 aa15.73■□□□□ 0.11
SMPD4-219ENST00000491128 STAT6P42226 847 aa15.73■□□□□ 0.11
SMPD4-219ENST00000491128 CUL4BQ13620 913 aa15.73■□□□□ 0.11
SMPD4-219ENST00000491128 TMEM132BQ14DG7 1078 aa15.73■□□□□ 0.11
SMPD4-219ENST00000491128 NAALADL2Q58DX5 795 aa15.73■□□□□ 0.11
SMPD4-219ENST00000491128 PPP4R3AQ6IN85 833 aa15.73■□□□□ 0.11
SMPD4-219ENST00000491128 CABP7Q86V35 215 aa15.73■□□□□ 0.11
SMPD4-219ENST00000491128 ZC3H15Q8WU90 426 aaKnown RBP15.73■□□□□ 0.11
SMPD4-219ENST00000491128 TRERF1Q96PN7 1200 aa15.73■□□□□ 0.11
SMPD4-219ENST00000491128 ZBED4O75132 1171 aa15.72■□□□□ 0.11
SMPD4-219ENST00000491128 PLCG1P19174 1290 aa15.72■□□□□ 0.11
SMPD4-219ENST00000491128 AP3B2Q13367 1082 aa15.72■□□□□ 0.11
SMPD4-219ENST00000491128 HSP90AA4PQ58FG1 418 aa15.72■□□□□ 0.11
SMPD4-219ENST00000491128 SNRNP48Q6IEG0 339 aaKnown RBP15.72■□□□□ 0.11
SMPD4-219ENST00000491128 AOPEPQ8N6M6 819 aa15.72■□□□□ 0.11
SMPD4-219ENST00000491128 IL31RAQ8NI17 732 aa15.72■□□□□ 0.11
SMPD4-219ENST00000491128 CRYGNQ8WXF5 182 aa15.72■□□□□ 0.11
SMPD4-219ENST00000491128 R3HDMLQ9H3Y0 253 aa15.72■□□□□ 0.11
SMPD4-219ENST00000491128 DISC1Q9NRI5 854 aa15.72■□□□□ 0.11
SMPD4-219ENST00000491128 C19orf81C9J6K1 198 aa15.72■□□□□ 0.11
SMPD4-219ENST00000491128 SREBF1P36956 1147 aa15.72■□□□□ 0.11
SMPD4-219ENST00000491128 COG2Q14746 738 aa15.72■□□□□ 0.11
SMPD4-219ENST00000491128 ECM1Q16610 540 aa15.72■□□□□ 0.11
SMPD4-219ENST00000491128 RRAGBQ5VZM2 374 aa15.72■□□□□ 0.11
SMPD4-219ENST00000491128 PDXDC2PQ6P474 469 aa15.72■□□□□ 0.11
SMPD4-219ENST00000491128 CATSPERGQ6ZRH7 1159 aa15.72■□□□□ 0.11
SMPD4-219ENST00000491128 IQUBQ8NA54 791 aa15.72■□□□□ 0.11
SMPD4-219ENST00000491128 LENG9Q96B70 501 aa15.72■□□□□ 0.11
SMPD4-219ENST00000491128 OPTNQ96CV9 577 aa15.72■□□□□ 0.11
SMPD4-219ENST00000491128 MAN1B1Q9UKM7 699 aa15.72■□□□□ 0.11
SMPD4-219ENST00000491128 PCDHA12Q9UN75 941 aa15.72■□□□□ 0.11
SMPD4-219ENST00000491128 DOCK1Q14185 1865 aa15.71■□□□□ 0.11
SMPD4-219ENST00000491128 ABCB11O95342 1321 aa15.71■□□□□ 0.11
SMPD4-219ENST00000491128 LAD1O00515 517 aa15.71■□□□□ 0.11
SMPD4-219ENST00000491128 DSG3P32926 999 aa15.71■□□□□ 0.11
SMPD4-219ENST00000491128 TXLNAP40222 546 aa15.71■□□□□ 0.11
SMPD4-219ENST00000491128 PRPHP41219 470 aa15.71■□□□□ 0.11
SMPD4-219ENST00000491128 ANKRD13AQ8IZ07 590 aa15.71■□□□□ 0.11
SMPD4-219ENST00000491128 IGSF22Q8N9C0 903 aa15.71■□□□□ 0.11
SMPD4-219ENST00000491128 GLT8D2Q9H1C3 349 aa15.71■□□□□ 0.11
SMPD4-219ENST00000491128 ANO10Q9NW15 660 aa15.71■□□□□ 0.11
SMPD4-219ENST00000491128 TUBE1Q9UJT0 475 aa15.71■□□□□ 0.11
SMPD4-219ENST00000491128 SPDYE16A6NNV3 312 aaPredicted RBP15.71■□□□□ 0.1
SMPD4-219ENST00000491128 EIF2AK2P19525 551 aaKnown RBP15.71■□□□□ 0.1
SMPD4-219ENST00000491128 RPS6P62753 249 aaKnown RBP15.71■□□□□ 0.1
SMPD4-219ENST00000491128 PNMA8AQ86V59 439 aaPredicted RBP15.71■□□□□ 0.1
SMPD4-219ENST00000491128 MORC2Q9Y6X9 1032 aaPredicted RBP15.71■□□□□ 0.1
SMPD4-219ENST00000491128 MYH7BA7E2Y1 1941 aa15.7■□□□□ 0.1
SMPD4-219ENST00000491128 PIK3CDO00329 1044 aa15.7■□□□□ 0.1
SMPD4-219ENST00000491128 GJA5P36382 358 aa15.7■□□□□ 0.1
SMPD4-219ENST00000491128 USP11P51784 963 aa15.7■□□□□ 0.1
SMPD4-219ENST00000491128 IQCB1Q15051 598 aa15.7■□□□□ 0.1
SMPD4-219ENST00000491128 DHX40Q8IX18 779 aaKnown RBP15.7■□□□□ 0.1
SMPD4-219ENST00000491128 SMARCE1Q969G3 411 aa15.7■□□□□ 0.1
SMPD4-219ENST00000491128 TAAR1Q96RJ0 339 aa15.7■□□□□ 0.1
SMPD4-219ENST00000491128 MSH4O15457 936 aa15.7■□□□□ 0.1
SMPD4-219ENST00000491128 NLRP12P59046 1061 aa15.7■□□□□ 0.1
SMPD4-219ENST00000491128 KCNK18Q7Z418 384 aa15.7■□□□□ 0.1
SMPD4-219ENST00000491128 SNX29Q8TEQ0 813 aa15.7■□□□□ 0.1
SMPD4-219ENST00000491128 C12orf42Q96LP6 360 aa15.7■□□□□ 0.1
SMPD4-219ENST00000491128 RNF146Q9NTX7 359 aa15.7■□□□□ 0.1
SMPD4-219ENST00000491128 ZNF214Q9UL59 606 aaPredicted RBP15.7■□□□□ 0.1
SMPD4-219ENST00000491128 CHMP2AO43633 222 aa15.69■□□□□ 0.1
SMPD4-219ENST00000491128 FOSP01100 380 aaPredicted RBP15.69■□□□□ 0.1
SMPD4-219ENST00000491128 REPS2Q8NFH8 660 aa15.69■□□□□ 0.1
SMPD4-219ENST00000491128 ANP32BQ92688 251 aaKnown RBP15.69■□□□□ 0.1
SMPD4-219ENST00000491128 PAGR1Q9BTK6 254 aa15.69■□□□□ 0.1
SMPD4-219ENST00000491128 MAPK8IP1Q9UQF2 711 aa15.69■□□□□ 0.1
SMPD4-219ENST00000491128 ADCY5O95622 1261 aa15.69■□□□□ 0.1
SMPD4-219ENST00000491128 BAATQ14032 418 aaPredicted RBP15.69■□□□□ 0.1
SMPD4-219ENST00000491128 TMEM266Q2M3C6 531 aa15.69■□□□□ 0.1
SMPD4-219ENST00000491128 SH3RF1Q7Z6J0 888 aa15.69■□□□□ 0.1
SMPD4-219ENST00000491128 TRMT44Q8IYL2 757 aaKnown RBP15.69■□□□□ 0.1
SMPD4-219ENST00000491128 SYTL5Q8TDW5 730 aaPredicted RBP15.69■□□□□ 0.1
SMPD4-219ENST00000491128 KCNMB3Q9NPA1 279 aa15.69■□□□□ 0.1
SMPD4-219ENST00000491128 BECN2A8MW95 431 aa15.68■□□□□ 0.1
SMPD4-219ENST00000491128 DDX39AO00148 427 aaKnown RBP15.68■□□□□ 0.1
SMPD4-219ENST00000491128 ARP10275 920 aa15.68■□□□□ 0.1
SMPD4-219ENST00000491128 MYCLP12524 364 aaPredicted RBP15.68■□□□□ 0.1
SMPD4-219ENST00000491128 DPYDQ12882 1025 aa15.68■□□□□ 0.1
SMPD4-219ENST00000491128 GRB10Q13322 594 aa15.68■□□□□ 0.1
SMPD4-219ENST00000491128 NCAPH2Q6IBW4 605 aa15.68■□□□□ 0.1
SMPD4-219ENST00000491128 KLHL10Q6JEL2 608 aa15.68■□□□□ 0.1
SMPD4-219ENST00000491128 ERO1BQ86YB8 467 aa15.68■□□□□ 0.1
SMPD4-219ENST00000491128 ETNPPLQ8TBG4 499 aa15.68■□□□□ 0.1
SMPD4-219ENST00000491128 PNMA5Q96PV4 448 aa15.68■□□□□ 0.1
SMPD4-219ENST00000491128 BTBD7Q9P203 1132 aa15.68■□□□□ 0.1
SMPD4-219ENST00000491128 IGLV3-22A0A075B6J6 115 aa15.68■□□□□ 0.1
SMPD4-219ENST00000491128 MEIS1O00470 390 aa15.68■□□□□ 0.1
SMPD4-219ENST00000491128 ECM2O94769 699 aaPredicted RBP15.68■□□□□ 0.1
SMPD4-219ENST00000491128 FXR2P51116 673 aaKnown RBP eCLIP15.68■□□□□ 0.1
SMPD4-219ENST00000491128 CYP4A11Q02928 519 aa15.68■□□□□ 0.1
SMPD4-219ENST00000491128 CCSER1Q9C0I3 900 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms