RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 CFTRP13569 1480 aa2.74□□□□□ -1.97
SNRNP40-207ENST00000491106 A0A1B0GTL3 188 aa2.74□□□□□ -1.97
SNRNP40-207ENST00000491106 C22orf46C9J442 243 aa2.74□□□□□ -1.97
SNRNP40-207ENST00000491106 HRKO00198 91 aa2.74□□□□□ -1.97
SNRNP40-207ENST00000491106 AGRPO00253 132 aa2.74□□□□□ -1.97
SNRNP40-207ENST00000491106 AURKAO14965 403 aa2.74□□□□□ -1.97
SNRNP40-207ENST00000491106 MYO1BO43795 1136 aa2.74□□□□□ -1.97
SNRNP40-207ENST00000491106 TRIM13O60858 407 aa2.74□□□□□ -1.97
SNRNP40-207ENST00000491106 ZBTB7AO95365 584 aa2.74□□□□□ -1.97
SNRNP40-207ENST00000491106 EFEMP2O95967 443 aa2.74□□□□□ -1.97
SNRNP40-207ENST00000491106 PLS3P13797 630 aa2.74□□□□□ -1.97
SNRNP40-207ENST00000491106 ERCC5P28715 1186 aaPredicted RBP2.74□□□□□ -1.97
SNRNP40-207ENST00000491106 BUD31P41223 144 aaPredicted RBP2.74□□□□□ -1.97
SNRNP40-207ENST00000491106 HDLBPQ00341 1268 aaKnown RBP2.74□□□□□ -1.97
SNRNP40-207ENST00000491106 SCRN1Q12765 414 aa2.74□□□□□ -1.97
SNRNP40-207ENST00000491106 SMAD4Q13485 552 aaKnown RBP2.74□□□□□ -1.97
SNRNP40-207ENST00000491106 CBX2Q14781 532 aaPredicted RBP2.74□□□□□ -1.97
SNRNP40-207ENST00000491106 LCE1DQ5T752 114 aa2.74□□□□□ -1.97
SNRNP40-207ENST00000491106 NT5DC1Q5TFE4 455 aa2.74□□□□□ -1.97
SNRNP40-207ENST00000491106 CEP68Q76N32 757 aa2.74□□□□□ -1.97
SNRNP40-207ENST00000491106 MILR1Q7Z6M3 343 aa2.74□□□□□ -1.97
SNRNP40-207ENST00000491106 STK32CQ86UX6 486 aa2.74□□□□□ -1.97
SNRNP40-207ENST00000491106 FERMT3Q86UX7 667 aa2.74□□□□□ -1.97
SNRNP40-207ENST00000491106 FAM124AQ86V42 546 aa2.74□□□□□ -1.97
SNRNP40-207ENST00000491106 IGDCC3Q8IVU1 814 aa2.74□□□□□ -1.97
SNRNP40-207ENST00000491106 TMEFF1Q8IYR6 380 aa2.74□□□□□ -1.97
SNRNP40-207ENST00000491106 TAB3Q8N5C8 712 aaPredicted RBP2.74□□□□□ -1.97
SNRNP40-207ENST00000491106 LINC01356Q8N9X3 169 aa2.74□□□□□ -1.97
SNRNP40-207ENST00000491106 RBBP8NLQ8NC74 664 aaPredicted RBP2.74□□□□□ -1.97
SNRNP40-207ENST00000491106 BVESQ8NE79 360 aa2.74□□□□□ -1.97
SNRNP40-207ENST00000491106 BUD13Q9BRD0 619 aaKnown RBP eCLIP2.74□□□□□ -1.97
SNRNP40-207ENST00000491106 ADAM7Q9H2U9 754 aa2.74□□□□□ -1.97
SNRNP40-207ENST00000491106 JADE2Q9NQC1 790 aa2.74□□□□□ -1.97
SNRNP40-207ENST00000491106 CGGBP1Q9UFW8 167 aaPredicted RBP2.74□□□□□ -1.97
SNRNP40-207ENST00000491106 PALD1Q9ULE6 856 aa2.74□□□□□ -1.97
SNRNP40-207ENST00000491106 COA3Q9Y2R0 106 aaPredicted RBP2.74□□□□□ -1.97
SNRNP40-207ENST00000491106 PCDHA5Q9Y5H7 936 aa2.74□□□□□ -1.97
SNRNP40-207ENST00000491106 FHAD1B1AJZ9 1412 aa2.74□□□□□ -1.97
SNRNP40-207ENST00000491106 SHOXO15266 292 aa2.73□□□□□ -1.97
SNRNP40-207ENST00000491106 CYP1A1P04798 512 aaPredicted RBP2.73□□□□□ -1.97
SNRNP40-207ENST00000491106 ASGR2P07307 311 aa2.73□□□□□ -1.97
SNRNP40-207ENST00000491106 SNRPB2P08579 225 aaKnown RBP2.73□□□□□ -1.97
SNRNP40-207ENST00000491106 MC3RP41968 323 aa2.73□□□□□ -1.97
SNRNP40-207ENST00000491106 GIPRP48546 466 aa2.73□□□□□ -1.97
SNRNP40-207ENST00000491106 SARSP49591 514 aaKnown RBP2.73□□□□□ -1.97
SNRNP40-207ENST00000491106 GJA9P57773 515 aa2.73□□□□□ -1.97
SNRNP40-207ENST00000491106 SLC9A5Q14940 896 aa2.73□□□□□ -1.97
SNRNP40-207ENST00000491106 NCAPHQ15003 741 aa2.73□□□□□ -1.97
SNRNP40-207ENST00000491106 PRAMEF18Q5VWM3 479 aa2.73□□□□□ -1.97
SNRNP40-207ENST00000491106 RCSD1Q6JBY9 416 aa2.73□□□□□ -1.97
SNRNP40-207ENST00000491106 EP400NLQ6ZTU2 488 aa2.73□□□□□ -1.97
SNRNP40-207ENST00000491106 ZC3H18Q86VM9 953 aaKnown RBP2.73□□□□□ -1.97
SNRNP40-207ENST00000491106 CILP2Q8IUL8 1156 aa2.73□□□□□ -1.97
SNRNP40-207ENST00000491106 TEX2Q8IWB9 1127 aa2.73□□□□□ -1.97
SNRNP40-207ENST00000491106 CHST13Q8NET6 341 aa2.73□□□□□ -1.97
SNRNP40-207ENST00000491106 ZNF526Q8TF50 670 aaPredicted RBP2.73□□□□□ -1.97
SNRNP40-207ENST00000491106 TMEM169Q96HH4 297 aa2.73□□□□□ -1.97
SNRNP40-207ENST00000491106 SEC16BQ96JE7 1060 aa2.73□□□□□ -1.97
SNRNP40-207ENST00000491106 C20orf173Q96LM9 149 aa2.73□□□□□ -1.97
SNRNP40-207ENST00000491106 GPR20Q99678 358 aa2.73□□□□□ -1.97
SNRNP40-207ENST00000491106 SPATA25Q9BR10 227 aa2.73□□□□□ -1.97
SNRNP40-207ENST00000491106 BDH2Q9BUT1 245 aa2.73□□□□□ -1.97
SNRNP40-207ENST00000491106 TNFRSF12AQ9NP84 129 aa2.73□□□□□ -1.97
SNRNP40-207ENST00000491106 ST7Q9NRC1 585 aa2.73□□□□□ -1.97
SNRNP40-207ENST00000491106 SIT1Q9Y3P8 196 aa2.73□□□□□ -1.97
SNRNP40-207ENST00000491106 TIMM13Q9Y5L4 95 aaPredicted RBP2.73□□□□□ -1.97
SNRNP40-207ENST00000491106 CADPSQ9ULU8 1353 aa2.73□□□□□ -1.97
SNRNP40-207ENST00000491106 NCANO14594 1321 aa2.72□□□□□ -1.97
SNRNP40-207ENST00000491106 FANCIQ9NVI1 1328 aa2.72□□□□□ -1.97
SNRNP40-207ENST00000491106 LRRC9Q6ZRR7 1453 aa2.72□□□□□ -1.97
SNRNP40-207ENST00000491106 ARAP1Q96P48 1450 aa2.72□□□□□ -1.97
SNRNP40-207ENST00000491106 ARHGAP35Q9NRY4 1499 aa2.72□□□□□ -1.97
SNRNP40-207ENST00000491106 C7orf72A4D263 438 aa2.72□□□□□ -1.97
SNRNP40-207ENST00000491106 SMAD7O15105 426 aaKnown RBP2.72□□□□□ -1.97
SNRNP40-207ENST00000491106 CBFA2T2O43439 604 aa2.72□□□□□ -1.97
SNRNP40-207ENST00000491106 RECKO95980 971 aa2.72□□□□□ -1.97
SNRNP40-207ENST00000491106 APPP05067 770 aa2.72□□□□□ -1.97
SNRNP40-207ENST00000491106 CYP2C8P10632 490 aa2.72□□□□□ -1.97
SNRNP40-207ENST00000491106 ATF2P15336 505 aa2.72□□□□□ -1.97
SNRNP40-207ENST00000491106 PMLP29590 882 aa2.72□□□□□ -1.97
SNRNP40-207ENST00000491106 SOX9P48436 509 aa2.72□□□□□ -1.97
SNRNP40-207ENST00000491106 SLURP1P55000 103 aa2.72□□□□□ -1.97
SNRNP40-207ENST00000491106 CORO7P57737 925 aa2.72□□□□□ -1.97
SNRNP40-207ENST00000491106 RPL11P62913 178 aaKnown RBP2.72□□□□□ -1.97
SNRNP40-207ENST00000491106 KIAA2012Q0VF49 1180 aa2.72□□□□□ -1.97
SNRNP40-207ENST00000491106 FXNQ16595 210 aa2.72□□□□□ -1.97
SNRNP40-207ENST00000491106 LDLRAD1Q5T700 205 aa2.72□□□□□ -1.97
SNRNP40-207ENST00000491106 MCTP2Q6DN12 878 aa2.72□□□□□ -1.97
SNRNP40-207ENST00000491106 IQCEQ6IPM2 695 aa2.72□□□□□ -1.97
SNRNP40-207ENST00000491106 ARHGEF39Q8N4T4 335 aa2.72□□□□□ -1.97
SNRNP40-207ENST00000491106 NLGN2Q8NFZ4 835 aa2.72□□□□□ -1.97
SNRNP40-207ENST00000491106 SMARCC2Q8TAQ2 1214 aa2.72□□□□□ -1.97
SNRNP40-207ENST00000491106 DIO2Q92813 273 aa2.72□□□□□ -1.97
SNRNP40-207ENST00000491106 RCC1LQ96I51 464 aaKnown RBP2.72□□□□□ -1.97
SNRNP40-207ENST00000491106 KCNC2Q96PR1 638 aa2.72□□□□□ -1.97
SNRNP40-207ENST00000491106 LGR4Q9BXB1 951 aa2.72□□□□□ -1.97
SNRNP40-207ENST00000491106 TGIF2Q9GZN2 237 aa2.72□□□□□ -1.97
SNRNP40-207ENST00000491106 KLHL25Q9H0H3 589 aa2.72□□□□□ -1.97
SNRNP40-207ENST00000491106 EPB41L4AQ9HCS5 686 aaPredicted RBP2.72□□□□□ -1.97
SNRNP40-207ENST00000491106 ACTR10Q9NZ32 417 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms