RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 SAAL1Q96ER3 474 aa11.26□□□□□ -0.61
BRD9-209ENST00000490814 CCDC51Q96ER9 411 aa11.26□□□□□ -0.61
BRD9-209ENST00000490814 RMND1Q9NWS8 449 aa11.26□□□□□ -0.61
BRD9-209ENST00000490814 GTPBP6O43824 516 aaPredicted RBP11.26□□□□□ -0.61
BRD9-209ENST00000490814 PRPF6O94906 941 aaKnown RBP11.26□□□□□ -0.61
BRD9-209ENST00000490814 SCG2P13521 617 aa11.26□□□□□ -0.61
BRD9-209ENST00000490814 POLD1P28340 1107 aa11.26□□□□□ -0.61
BRD9-209ENST00000490814 PDE6BP35913 854 aa11.26□□□□□ -0.61
BRD9-209ENST00000490814 CEP57Q86XR8 500 aa11.26□□□□□ -0.61
BRD9-209ENST00000490814 C3orf20Q8ND61 904 aa11.26□□□□□ -0.61
BRD9-209ENST00000490814 JAKMIP2Q96AA8 810 aa11.26□□□□□ -0.61
BRD9-209ENST00000490814 ADAMTS3O15072 1205 aa11.25□□□□□ -0.61
BRD9-209ENST00000490814 ARHGAP25P42331 645 aa11.25□□□□□ -0.61
BRD9-209ENST00000490814 TMEM132AQ24JP5 1023 aa11.25□□□□□ -0.61
BRD9-209ENST00000490814 SLC27A3Q5K4L6 730 aa11.25□□□□□ -0.61
BRD9-209ENST00000490814 WLSQ5T9L3 541 aa11.25□□□□□ -0.61
BRD9-209ENST00000490814 KCTD16Q68DU8 428 aa11.25□□□□□ -0.61
BRD9-209ENST00000490814 DTHD1Q6ZMT9 781 aa11.25□□□□□ -0.61
BRD9-209ENST00000490814 CSGALNACT2Q8N6G5 542 aa11.25□□□□□ -0.61
BRD9-209ENST00000490814 SPDL1Q96EA4 605 aa11.25□□□□□ -0.61
BRD9-209ENST00000490814 G3BP2Q9UN86 482 aaKnown RBP11.25□□□□□ -0.61
BRD9-209ENST00000490814 STX8Q9UNK0 236 aa11.25□□□□□ -0.61
BRD9-209ENST00000490814 ENO4A6NNW6 628 aa11.25□□□□□ -0.61
BRD9-209ENST00000490814 PSMA7O14818 248 aa11.25□□□□□ -0.61
BRD9-209ENST00000490814 PYGLP06737 847 aa11.25□□□□□ -0.61
BRD9-209ENST00000490814 IDEP14735 1019 aa11.25□□□□□ -0.61
BRD9-209ENST00000490814 SEC23AQ15436 765 aa11.25□□□□□ -0.61
BRD9-209ENST00000490814 ENOX2Q16206 610 aaKnown RBP11.25□□□□□ -0.61
BRD9-209ENST00000490814 ELOA2Q8IYF1 753 aaPredicted RBP11.25□□□□□ -0.61
BRD9-209ENST00000490814 MSL3Q8N5Y2 521 aaKnown RBP11.25□□□□□ -0.61
BRD9-209ENST00000490814 SPATA20Q8TB22 786 aa11.25□□□□□ -0.61
BRD9-209ENST00000490814 VIPAS39Q9H9C1 493 aa11.25□□□□□ -0.61
BRD9-209ENST00000490814 VAT1LQ9HCJ6 419 aa11.25□□□□□ -0.61
BRD9-209ENST00000490814 RWDD2AQ9UIY3 292 aa11.25□□□□□ -0.61
BRD9-209ENST00000490814 MAGEA8P43361 318 aa11.25□□□□□ -0.61
BRD9-209ENST00000490814 CKAP4Q07065 602 aaKnown RBP11.25□□□□□ -0.61
BRD9-209ENST00000490814 PPFIA1Q13136 1202 aa11.25□□□□□ -0.61
BRD9-209ENST00000490814 PDCLQ13371 301 aa11.25□□□□□ -0.61
BRD9-209ENST00000490814 INF2Q27J81 1249 aa11.25□□□□□ -0.61
BRD9-209ENST00000490814 TMTC3Q6ZXV5 915 aa11.25□□□□□ -0.61
BRD9-209ENST00000490814 SPDYE1Q8NFV5 336 aaPredicted RBP11.25□□□□□ -0.61
BRD9-209ENST00000490814 MCM9Q9NXL9 1143 aa11.25□□□□□ -0.61
BRD9-209ENST00000490814 ZNF652Q9Y2D9 606 aa11.25□□□□□ -0.61
BRD9-209ENST00000490814 KLK7P49862 253 aa11.24□□□□□ -0.61
BRD9-209ENST00000490814 RAB27AP51159 221 aa11.24□□□□□ -0.61
BRD9-209ENST00000490814 ASIC1P78348 528 aa11.24□□□□□ -0.61
BRD9-209ENST00000490814 ATP2C1P98194 919 aaPredicted RBP11.24□□□□□ -0.61
BRD9-209ENST00000490814 SLC7A5Q01650 507 aa11.24□□□□□ -0.61
BRD9-209ENST00000490814 CEP85LQ5SZL2 805 aa11.24□□□□□ -0.61
BRD9-209ENST00000490814 ZNF658Q5TYW1 1059 aaPredicted RBP11.24□□□□□ -0.61
BRD9-209ENST00000490814 TSHZ1Q6ZSZ6 1077 aa11.24□□□□□ -0.61
BRD9-209ENST00000490814 MYO1AQ9UBC5 1043 aa11.24□□□□□ -0.61
BRD9-209ENST00000490814 KRT86O43790 486 aa11.24□□□□□ -0.61
BRD9-209ENST00000490814 CALM1P0DP23 149 aa11.24□□□□□ -0.61
BRD9-209ENST00000490814 CALM2P0DP24 149 aa11.24□□□□□ -0.61
BRD9-209ENST00000490814 CALM3P0DP25 149 aa11.24□□□□□ -0.61
BRD9-209ENST00000490814 EZRP15311 586 aaKnown RBP11.24□□□□□ -0.61
BRD9-209ENST00000490814 IL6STP40189 918 aaPredicted RBP11.24□□□□□ -0.61
BRD9-209ENST00000490814 PMS1P54277 932 aaKnown RBP11.24□□□□□ -0.61
BRD9-209ENST00000490814 ACTN3Q08043 901 aaPredicted RBP11.24□□□□□ -0.61
BRD9-209ENST00000490814 TROAPQ12815 778 aa11.24□□□□□ -0.61
BRD9-209ENST00000490814 HHATQ5VTY9 493 aa11.24□□□□□ -0.61
BRD9-209ENST00000490814 CCDC47Q96A33 483 aaKnown RBP11.24□□□□□ -0.61
BRD9-209ENST00000490814 MTRQ99707 1265 aa11.24□□□□□ -0.61
BRD9-209ENST00000490814 CPVLQ9H3G5 476 aa11.24□□□□□ -0.61
BRD9-209ENST00000490814 AGPAT5Q9NUQ2 364 aa11.24□□□□□ -0.61
BRD9-209ENST00000490814 DUSP10Q9Y6W6 482 aa11.24□□□□□ -0.61
BRD9-209ENST00000490814 PNPLA7Q6ZV29 1317 aa11.24□□□□□ -0.61
BRD9-209ENST00000490814 GBP2P32456 591 aaPredicted RBP11.23□□□□□ -0.61
BRD9-209ENST00000490814 PBX1P40424 430 aa11.23□□□□□ -0.61
BRD9-209ENST00000490814 AARSP49588 968 aaKnown RBP eCLIP11.23□□□□□ -0.611e-6■■■■■ 29.7
BRD9-209ENST00000490814 SPA17Q15506 151 aa11.23□□□□□ -0.61
BRD9-209ENST00000490814 SH3RF1Q7Z6J0 888 aa11.23□□□□□ -0.61
BRD9-209ENST00000490814 ANKRD13CQ8N6S4 541 aa11.23□□□□□ -0.61
BRD9-209ENST00000490814 SMCR8Q8TEV9 937 aaPredicted RBP11.23□□□□□ -0.61
BRD9-209ENST00000490814 MKNK2Q9HBH9 465 aa11.23□□□□□ -0.61
BRD9-209ENST00000490814 LIMA1Q9UHB6 759 aaKnown RBP11.23□□□□□ -0.61
BRD9-209ENST00000490814 GOLGA8HP0CJ92 632 aa11.23□□□□□ -0.61
BRD9-209ENST00000490814 CYLC1P35663 651 aaPredicted RBP11.23□□□□□ -0.61
BRD9-209ENST00000490814 AMPD2Q01433 879 aa11.23□□□□□ -0.61
BRD9-209ENST00000490814 TRIM14Q14142 442 aa11.23□□□□□ -0.61
BRD9-209ENST00000490814 CCNI2Q6ZMN8 369 aaPredicted RBP11.23□□□□□ -0.61
BRD9-209ENST00000490814 AMOTL1Q8IY63 956 aa11.23□□□□□ -0.61
BRD9-209ENST00000490814 MB21D1Q8N884 522 aa11.23□□□□□ -0.61
BRD9-209ENST00000490814 TANGO6Q9C0B7 1094 aa11.23□□□□□ -0.61
BRD9-209ENST00000490814 HAUS4Q9H6D7 363 aa11.23□□□□□ -0.61
BRD9-209ENST00000490814 CXCR5P32302 372 aa11.23□□□□□ -0.61
BRD9-209ENST00000490814 PDE4DQ08499 809 aa11.23□□□□□ -0.61
BRD9-209ENST00000490814 NFIXQ14938 502 aa11.23□□□□□ -0.61
BRD9-209ENST00000490814 SETDB1Q15047 1291 aa11.23□□□□□ -0.61
BRD9-209ENST00000490814 IL17AQ16552 155 aa11.23□□□□□ -0.61
BRD9-209ENST00000490814 LETM2Q2VYF4 491 aa11.23□□□□□ -0.61
BRD9-209ENST00000490814 CCDC181Q5TID7 509 aa11.23□□□□□ -0.61
BRD9-209ENST00000490814 TRAPPC11Q7Z392 1133 aa11.23□□□□□ -0.61
BRD9-209ENST00000490814 KRT26Q7Z3Y9 468 aa11.23□□□□□ -0.61
BRD9-209ENST00000490814 BLIDQ8IZY5 108 aa11.23□□□□□ -0.61
BRD9-209ENST00000490814 HPS3Q969F9 1004 aa11.23□□□□□ -0.61
BRD9-209ENST00000490814 RRP36Q96EU6 259 aaKnown RBP11.23□□□□□ -0.61
BRD9-209ENST00000490814 CCDC42Q96M95 316 aa11.23□□□□□ -0.61
BRD9-209ENST00000490814 FAM207AQ9NSI2 230 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms