RNA–Protein interactions for RNA: ENST00000490753.1

NOP56-215, Transcript of NOP56 ribonucleoprotein, human

TSL 2

Gene NOP56, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NOP56-215	ENST00000490753	NBPF20	Q3BBV1	942 aa		11.45	□□□□□ -0.58
NOP56-215	ENST00000490753	TMEM31	Q5JXX7	168 aa		11.45	□□□□□ -0.58
NOP56-215	ENST00000490753	RCSD1	Q6JBY9	416 aa		11.45	□□□□□ -0.58
NOP56-215	ENST00000490753	HERC6	Q8IVU3	1022 aa		11.45	□□□□□ -0.58
NOP56-215	ENST00000490753	PHOSPHO2	Q8TCD6	241 aa		11.45	□□□□□ -0.58
NOP56-215	ENST00000490753	CRBN	Q96SW2	442 aa		11.45	□□□□□ -0.58
NOP56-215	ENST00000490753	MTG1	Q9BT17	334 aa	Predicted RBP	11.45	□□□□□ -0.58
NOP56-215	ENST00000490753	C11orf16	Q9NQ32	467 aa		11.45	□□□□□ -0.58
NOP56-215	ENST00000490753	IL17RB	Q9NRM6	502 aa		11.45	□□□□□ -0.58
NOP56-215	ENST00000490753	ADD3	Q9UEY8	706 aa	Known RBP	11.45	□□□□□ -0.58
NOP56-215	ENST00000490753	DOCK5	Q9H7D0	1870 aa		11.44	□□□□□ -0.58
NOP56-215	ENST00000490753	RAD50	Q92878	1312 aa		11.44	□□□□□ -0.58
NOP56-215	ENST00000490753	LOC102724159	A0A0B4J2E5	919 aa		11.44	□□□□□ -0.58
NOP56-215	ENST00000490753	RBM47	A0AV96	593 aa	Known RBP	11.44	□□□□□ -0.58
NOP56-215	ENST00000490753	PTPDC1	A2A3K4	754 aa		11.44	□□□□□ -0.58
NOP56-215	ENST00000490753	FAM86C2P	A6NEL3	165 aa		11.44	□□□□□ -0.58
NOP56-215	ENST00000490753	FOXP2	O15409	715 aa		11.44	□□□□□ -0.58
NOP56-215	ENST00000490753	SLC16A2	P36021	539 aa		11.44	□□□□□ -0.58
NOP56-215	ENST00000490753	PPP2R5B	Q15173	497 aa		11.44	□□□□□ -0.58
NOP56-215	ENST00000490753	PWP2	Q15269	919 aa	Known RBP	11.44	□□□□□ -0.58
NOP56-215	ENST00000490753	PPP4R3B	Q5MIZ7	849 aa		11.44	□□□□□ -0.58
NOP56-215	ENST00000490753	TTBK2	Q6IQ55	1244 aa		11.44	□□□□□ -0.58
NOP56-215	ENST00000490753	NFRKB	Q6P4R8	1299 aa		11.44	□□□□□ -0.58
NOP56-215	ENST00000490753	GDPD5	Q8WTR4	605 aa		11.44	□□□□□ -0.58
NOP56-215	ENST00000490753	HLA-C	Q95604	372 aa		11.44	□□□□□ -0.58
NOP56-215	ENST00000490753	FTO	Q9C0B1	505 aa	Known RBP eCLIP	11.44	□□□□□ -0.58	6e-31	■□□□□ 10.4
NOP56-215	ENST00000490753	CHMP4B	Q9H444	224 aa	Known RBP	11.44	□□□□□ -0.58
NOP56-215	ENST00000490753	GPHN	Q9NQX3	736 aa	Predicted RBP	11.44	□□□□□ -0.58
NOP56-215	ENST00000490753	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.44	□□□□□ -0.58
NOP56-215	ENST00000490753	TRIO	O75962	3097 aa		11.44	□□□□□ -0.58
NOP56-215	ENST00000490753	LCHN	A4D1U4	455 aa		11.43	□□□□□ -0.58
NOP56-215	ENST00000490753	BAIAP3	O94812	1187 aa		11.43	□□□□□ -0.58
NOP56-215	ENST00000490753	CTDSPL2	Q05D32	466 aa		11.43	□□□□□ -0.58
NOP56-215	ENST00000490753	SYDE2	Q5VT97	1194 aa		11.43	□□□□□ -0.58
NOP56-215	ENST00000490753	RETREG2	Q8NC44	543 aa		11.43	□□□□□ -0.58
NOP56-215	ENST00000490753	DCAF4	Q8WV16	495 aa		11.43	□□□□□ -0.58
NOP56-215	ENST00000490753	COPS5	Q92905	334 aa		11.43	□□□□□ -0.58
NOP56-215	ENST00000490753	INCENP	Q9NQS7	918 aa		11.43	□□□□□ -0.58
NOP56-215	ENST00000490753		U3KPZ7	1027 aa	Predicted RBP	11.43	□□□□□ -0.58
NOP56-215	ENST00000490753	WDFY4	Q6ZS81	3184 aa		11.43	□□□□□ -0.58
NOP56-215	ENST00000490753	C5orf42	Q9H799	3197 aa		11.43	□□□□□ -0.58
NOP56-215	ENST00000490753	FRMPD2	Q68DX3	1309 aa	Predicted RBP	11.42	□□□□□ -0.58
NOP56-215	ENST00000490753	KAT6A	Q92794	2004 aa		11.42	□□□□□ -0.58
NOP56-215	ENST00000490753		A6NJR5	290 aa		11.42	□□□□□ -0.58
NOP56-215	ENST00000490753	KIF28P	B7ZC32	967 aa		11.42	□□□□□ -0.58
NOP56-215	ENST00000490753	NKRF	O15226	690 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
NOP56-215	ENST00000490753	ARIH2	O95376	493 aa		11.42	□□□□□ -0.58
NOP56-215	ENST00000490753	EDNRB	P24530	442 aa		11.42	□□□□□ -0.58
NOP56-215	ENST00000490753	CALML3	P27482	149 aa		11.42	□□□□□ -0.58
NOP56-215	ENST00000490753	KCNJ6	P48051	423 aa		11.42	□□□□□ -0.58
NOP56-215	ENST00000490753	NOV	P48745	357 aa		11.42	□□□□□ -0.58
NOP56-215	ENST00000490753	WDR5	P61964	334 aa	Known RBP	11.42	□□□□□ -0.58
NOP56-215	ENST00000490753	PTPN11	Q06124	597 aa	Predicted RBP	11.42	□□□□□ -0.58
NOP56-215	ENST00000490753	BFSP2	Q13515	415 aa		11.42	□□□□□ -0.58
NOP56-215	ENST00000490753	LRRFIP1	Q32MZ4	808 aa	Known RBP	11.42	□□□□□ -0.58
NOP56-215	ENST00000490753	BRDT	Q58F21	947 aa	Predicted RBP	11.42	□□□□□ -0.58
NOP56-215	ENST00000490753	ZMYM1	Q5SVZ6	1142 aa		11.42	□□□□□ -0.58
NOP56-215	ENST00000490753	C20orf194	Q5TEA3	1177 aa		11.42	□□□□□ -0.58
NOP56-215	ENST00000490753	BTNL9	Q6UXG8	535 aa		11.42	□□□□□ -0.58
NOP56-215	ENST00000490753	TMCO2	Q7Z6W1	182 aa	Predicted RBP	11.42	□□□□□ -0.58
NOP56-215	ENST00000490753	SCFD2	Q8WU76	684 aa		11.42	□□□□□ -0.58
NOP56-215	ENST00000490753	CLEC4D	Q8WXI8	215 aa		11.42	□□□□□ -0.58
NOP56-215	ENST00000490753	CTAGE1	Q96RT6	745 aa		11.42	□□□□□ -0.58
NOP56-215	ENST00000490753	FSD1	Q9BTV5	496 aa		11.42	□□□□□ -0.58
NOP56-215	ENST00000490753	NOD1	Q9Y239	953 aa		11.42	□□□□□ -0.58
NOP56-215	ENST00000490753	RBAK-RBAKDN	I3L0D1	243 aa		11.41	□□□□□ -0.58
NOP56-215	ENST00000490753	RANBP6	O60518	1105 aa	Known RBP	11.41	□□□□□ -0.58
NOP56-215	ENST00000490753	GPR37L1	O60883	481 aa		11.41	□□□□□ -0.58
NOP56-215	ENST00000490753	ANP32A	P39687	249 aa	Known RBP	11.41	□□□□□ -0.58
NOP56-215	ENST00000490753	CHMP4BP1	P59074	171 aa		11.41	□□□□□ -0.58
NOP56-215	ENST00000490753	RPS6	P62753	249 aa	Known RBP	11.41	□□□□□ -0.58
NOP56-215	ENST00000490753	DEFB103A	P81534	67 aa		11.41	□□□□□ -0.58
NOP56-215	ENST00000490753	PDE4D	Q08499	809 aa		11.41	□□□□□ -0.58
NOP56-215	ENST00000490753	RNF207	Q6ZRF8	634 aa		11.41	□□□□□ -0.58
NOP56-215	ENST00000490753	CAGE1	Q8TC20	777 aa		11.41	□□□□□ -0.58
NOP56-215	ENST00000490753	PI4K2B	Q8TCG2	481 aa		11.41	□□□□□ -0.58
NOP56-215	ENST00000490753	CD320	Q9NPF0	282 aa		11.41	□□□□□ -0.58
NOP56-215	ENST00000490753	TTC41P	Q6P2S7	1318 aa		11.4	□□□□□ -0.58
NOP56-215	ENST00000490753	ORC4	O43929	436 aa		11.4	□□□□□ -0.58
NOP56-215	ENST00000490753	KPNA6	O60684	536 aa		11.4	□□□□□ -0.58
NOP56-215	ENST00000490753	TXN	P10599	105 aa	Known RBP	11.4	□□□□□ -0.58
NOP56-215	ENST00000490753	GPNMB	Q14956	572 aa		11.4	□□□□□ -0.58
NOP56-215	ENST00000490753	PTGIS	Q16647	500 aa		11.4	□□□□□ -0.58
NOP56-215	ENST00000490753	GDF6	Q6KF10	455 aa	Predicted RBP	11.4	□□□□□ -0.58
NOP56-215	ENST00000490753	LRRC8D	Q7L1W4	858 aa		11.4	□□□□□ -0.58
NOP56-215	ENST00000490753	CCDC155	Q8N6L0	562 aa		11.4	□□□□□ -0.58
NOP56-215	ENST00000490753	AFAP1L1	Q8TED9	768 aa		11.4	□□□□□ -0.58
NOP56-215	ENST00000490753	DHX38	Q92620	1227 aa	Known RBP	11.4	□□□□□ -0.58
NOP56-215	ENST00000490753	DCTPP1	Q9H773	170 aa		11.4	□□□□□ -0.58
NOP56-215	ENST00000490753	GPCPD1	Q9NPB8	672 aa		11.4	□□□□□ -0.58
NOP56-215	ENST00000490753	MTUS1	Q9ULD2	1270 aa		11.4	□□□□□ -0.58
NOP56-215	ENST00000490753	KIAA1671	Q9BY89	1806 aa		11.39	□□□□□ -0.59
NOP56-215	ENST00000490753	WDR19	Q8NEZ3	1342 aa		11.39	□□□□□ -0.59
NOP56-215	ENST00000490753	MMP3	P08254	477 aa		11.39	□□□□□ -0.59
NOP56-215	ENST00000490753	PDHB	P11177	359 aa		11.39	□□□□□ -0.59
NOP56-215	ENST00000490753	TCTN1	Q2MV58	587 aa		11.39	□□□□□ -0.59
NOP56-215	ENST00000490753	VPS53	Q5VIR6	699 aa		11.39	□□□□□ -0.59
NOP56-215	ENST00000490753	CNKSR3	Q6P9H4	555 aa		11.39	□□□□□ -0.59
NOP56-215	ENST00000490753	DNER	Q8NFT8	737 aa		11.39	□□□□□ -0.59
NOP56-215	ENST00000490753	OTUD7A	Q8TE49	926 aa	Predicted RBP	11.39	□□□□□ -0.59

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