RNA–Protein interactions for RNA: ENST00000490730.1

SYNE4-205, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 1,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-205ENST00000490730 MTG1Q9BT17 334 aaPredicted RBP24.46■■□□□ 1.51
SYNE4-205ENST00000490730 NOC4LQ9BVI4 516 aaKnown RBP24.46■■□□□ 1.51
SYNE4-205ENST00000490730 JMJD4Q9H9V9 463 aa24.46■■□□□ 1.51
SYNE4-205ENST00000490730 MRPL11Q9Y3B7 192 aaKnown RBP24.46■■□□□ 1.51
SYNE4-205ENST00000490730 TMEM265A0A087WTH1 108 aa24.45■■□□□ 1.5
SYNE4-205ENST00000490730 GRXCR1A8MXD5 290 aa24.45■■□□□ 1.5
SYNE4-205ENST00000490730 TTLL4Q14679 1199 aa24.45■■□□□ 1.5
SYNE4-205ENST00000490730 STAG2Q8N3U4 1231 aa24.45■■□□□ 1.5
SYNE4-205ENST00000490730 MAFAQ8NHW3 353 aaPredicted RBP24.45■■□□□ 1.5
SYNE4-205ENST00000490730 SYTL5Q8TDW5 730 aaPredicted RBP24.45■■□□□ 1.5
SYNE4-205ENST00000490730 TAAR1Q96RJ0 339 aa24.45■■□□□ 1.5
SYNE4-205ENST00000490730 TRMT13Q9NUP7 481 aaKnown RBP24.45■■□□□ 1.5
SYNE4-205ENST00000490730 CDH23Q9H251 3354 aa24.45■■□□□ 1.5
SYNE4-205ENST00000490730 EYSQ5T1H1 3165 aa24.44■■□□□ 1.5
SYNE4-205ENST00000490730 CHMP4BP1P59074 171 aa24.44■■□□□ 1.5
SYNE4-205ENST00000490730 SEPT14Q6ZU15 432 aa24.44■■□□□ 1.5
SYNE4-205ENST00000490730 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.44■■□□□ 1.5
SYNE4-205ENST00000490730 NSUN6Q8TEA1 469 aaKnown RBP24.44■■□□□ 1.5
SYNE4-205ENST00000490730 PPP1R13LQ8WUF5 828 aa24.44■■□□□ 1.5
SYNE4-205ENST00000490730 TIFAQ96CG3 184 aa24.44■■□□□ 1.5
SYNE4-205ENST00000490730 RMDN3Q96TC7 470 aa24.44■■□□□ 1.5
SYNE4-205ENST00000490730 COL20A1Q9P218 1284 aa24.44■■□□□ 1.5
SYNE4-205ENST00000490730 U3KPZ7 1027 aaPredicted RBP24.44■■□□□ 1.5
SYNE4-205ENST00000490730 ARIH2O95376 493 aa24.43■■□□□ 1.5
SYNE4-205ENST00000490730 FGBP02675 491 aa24.43■■□□□ 1.5
SYNE4-205ENST00000490730 CYP2C9P11712 490 aa24.43■■□□□ 1.5
SYNE4-205ENST00000490730 CHMLP26374 656 aa24.43■■□□□ 1.5
SYNE4-205ENST00000490730 PTH1RQ03431 593 aa24.43■■□□□ 1.5
SYNE4-205ENST00000490730 SEC23AQ15436 765 aa24.43■■□□□ 1.5
SYNE4-205ENST00000490730 WNT8AQ9H1J5 351 aa24.43■■□□□ 1.5
SYNE4-205ENST00000490730 MTIF3Q9H2K0 278 aaKnown RBP24.43■■□□□ 1.5
SYNE4-205ENST00000490730 KLRF2D3W0D1 207 aa24.42■■□□□ 1.5
SYNE4-205ENST00000490730 CFBP00751 764 aa24.42■■□□□ 1.5
SYNE4-205ENST00000490730 SUPT20HL2P0C7V6 817 aa24.42■■□□□ 1.5
SYNE4-205ENST00000490730 EIF2AK2P19525 551 aaKnown RBP24.42■■□□□ 1.5
SYNE4-205ENST00000490730 PBX2P40425 430 aa24.42■■□□□ 1.5
SYNE4-205ENST00000490730 NBPF20Q3BBV1 942 aa24.42■■□□□ 1.5
SYNE4-205ENST00000490730 RASIP1Q5U651 963 aa24.42■■□□□ 1.5
SYNE4-205ENST00000490730 ARHGEF16Q5VV41 709 aa24.42■■□□□ 1.5
SYNE4-205ENST00000490730 OTOP2Q7RTS6 562 aa24.42■■□□□ 1.5
SYNE4-205ENST00000490730 RALYLQ86SE5 291 aaKnown RBP24.42■■□□□ 1.5
SYNE4-205ENST00000490730 SCLYQ96I15 445 aa24.42■■□□□ 1.5
SYNE4-205ENST00000490730 AMNQ9BXJ7 453 aa24.42■■□□□ 1.5
SYNE4-205ENST00000490730 ZNF576Q9H609 170 aa24.42■■□□□ 1.5
SYNE4-205ENST00000490730 CUL9Q8IWT3 2517 aa24.41■■□□□ 1.5
SYNE4-205ENST00000490730 KIAA1217Q5T5P2 1943 aa24.41■■□□□ 1.5
SYNE4-205ENST00000490730 A6NJR5 290 aa24.41■■□□□ 1.5
SYNE4-205ENST00000490730 CYP21A2P08686 494 aa24.41■■□□□ 1.5
SYNE4-205ENST00000490730 GRIN2CQ14957 1233 aa24.41■■□□□ 1.5
SYNE4-205ENST00000490730 STXBP2Q15833 593 aa24.41■■□□□ 1.5
SYNE4-205ENST00000490730 CHST3Q7LGC8 479 aa24.41■■□□□ 1.5
SYNE4-205ENST00000490730 HERVK_113Q902F9 699 aa24.41■■□□□ 1.5
SYNE4-205ENST00000490730 PBX4Q9BYU1 374 aa24.41■■□□□ 1.5
SYNE4-205ENST00000490730 MAF1Q9H063 256 aa24.41■■□□□ 1.5
SYNE4-205ENST00000490730 CXXC1Q9P0U4 656 aaPredicted RBP24.41■■□□□ 1.5
SYNE4-205ENST00000490730 MAD2L2Q9UI95 211 aa24.41■■□□□ 1.5
SYNE4-205ENST00000490730 SCN10AQ9Y5Y9 1956 aa24.41■■□□□ 1.5
SYNE4-205ENST00000490730 ERICH2A1L162 156 aa24.4■■□□□ 1.5
SYNE4-205ENST00000490730 IFIT3O14879 490 aaKnown RBP24.4■■□□□ 1.5
SYNE4-205ENST00000490730 KPNA6O60684 536 aa24.4■■□□□ 1.5
SYNE4-205ENST00000490730 LY6KQ17RY6 165 aa24.4■■□□□ 1.5
SYNE4-205ENST00000490730 HOMER1Q86YM7 354 aa24.4■■□□□ 1.5
SYNE4-205ENST00000490730 IWS1Q96ST2 819 aa24.4■■□□□ 1.5
SYNE4-205ENST00000490730 RPUSD2Q8IZ73 545 aaKnown RBP24.39■■□□□ 1.49
SYNE4-205ENST00000490730 AFG1LQ8WV93 481 aa24.39■■□□□ 1.49
SYNE4-205ENST00000490730 GBF1Q92538 1859 aa24.38■■□□□ 1.49
SYNE4-205ENST00000490730 ZBBXA8MT70 800 aa24.38■■□□□ 1.49
SYNE4-205ENST00000490730 ZBTB5O15062 677 aa24.38■■□□□ 1.49
SYNE4-205ENST00000490730 GH1P01241 217 aa24.38■■□□□ 1.49
SYNE4-205ENST00000490730 SART3Q15020 963 aaKnown RBP24.38■■□□□ 1.49
SYNE4-205ENST00000490730 NFRKBQ6P4R8 1299 aa24.38■■□□□ 1.49
SYNE4-205ENST00000490730 CCDC62Q6P9F0 684 aa24.38■■□□□ 1.49
SYNE4-205ENST00000490730 PXMP2Q9NR77 195 aa24.38■■□□□ 1.49
SYNE4-205ENST00000490730 MSRAQ9UJ68 235 aa24.38■■□□□ 1.49
SYNE4-205ENST00000490730 NOD1Q9Y239 953 aa24.38■■□□□ 1.49
SYNE4-205ENST00000490730 PCDHA1Q9Y5I3 950 aa24.38■■□□□ 1.49
SYNE4-205ENST00000490730 TAF6LQ9Y6J9 622 aa24.38■■□□□ 1.49
SYNE4-205ENST00000490730 PALM3A6NDB9 673 aaPredicted RBP24.37■■□□□ 1.49
SYNE4-205ENST00000490730 E7EWF7 191 aa24.37■■□□□ 1.49
SYNE4-205ENST00000490730 SGSM2O43147 1006 aa24.37■■□□□ 1.49
SYNE4-205ENST00000490730 PPP1R11O60927 126 aaPredicted RBP24.37■■□□□ 1.49
SYNE4-205ENST00000490730 MMP3P08254 477 aa24.37■■□□□ 1.49
SYNE4-205ENST00000490730 GRM4Q14833 912 aa24.37■■□□□ 1.49
SYNE4-205ENST00000490730 WTAPQ15007 396 aa24.37■■□□□ 1.49
SYNE4-205ENST00000490730 DEFB128Q7Z7B8 93 aa24.37■■□□□ 1.49
SYNE4-205ENST00000490730 NCOA7Q8NI08 942 aa24.37■■□□□ 1.49
SYNE4-205ENST00000490730 SENP2Q9HC62 589 aa24.37■■□□□ 1.49
SYNE4-205ENST00000490730 MRVI1Q9Y6F6 885 aa24.37■■□□□ 1.49
SYNE4-205ENST00000490730 SCN5AQ14524 2016 aa24.37■■□□□ 1.49
SYNE4-205ENST00000490730 OPLAHO14841 1288 aa24.36■■□□□ 1.49
SYNE4-205ENST00000490730 NR3C2P08235 984 aa24.36■■□□□ 1.49
SYNE4-205ENST00000490730 MYCLP12524 364 aaPredicted RBP24.36■■□□□ 1.49
SYNE4-205ENST00000490730 HOXA13P31271 388 aaPredicted RBP24.36■■□□□ 1.49
SYNE4-205ENST00000490730 HSD17B4P51659 736 aa24.36■■□□□ 1.49
SYNE4-205ENST00000490730 ARHGAP1Q07960 439 aa24.36■■□□□ 1.49
SYNE4-205ENST00000490730 RAB30Q15771 203 aa24.36■■□□□ 1.49
SYNE4-205ENST00000490730 PRUNE2Q8WUY3 3088 aa24.36■■□□□ 1.49
SYNE4-205ENST00000490730 CHD9Q3L8U1 2897 aa24.35■■□□□ 1.49
SYNE4-205ENST00000490730 EIF3JO75822 258 aaKnown RBP24.35■■□□□ 1.49
SYNE4-205ENST00000490730 TMEM67Q5HYA8 995 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms