RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 DNMBPQ6XZF7 1577 aa3.73□□□□□ -1.81
UBXN4-208ENST00000490163 TTLL8A6PVC2 850 aa3.73□□□□□ -1.81
UBXN4-208ENST00000490163 RNASEH2AO75792 299 aaKnown RBP3.73□□□□□ -1.81
UBXN4-208ENST00000490163 NEFMP07197 916 aa3.73□□□□□ -1.81
UBXN4-208ENST00000490163 SETSIPP0DME0 302 aa3.73□□□□□ -1.81
UBXN4-208ENST00000490163 VSIG8P0DPA2 414 aa3.73□□□□□ -1.81
UBXN4-208ENST00000490163 NFKB1P19838 968 aa3.73□□□□□ -1.81
UBXN4-208ENST00000490163 GRK4P32298 578 aa3.73□□□□□ -1.81
UBXN4-208ENST00000490163 IREB2P48200 963 aaKnown RBP3.73□□□□□ -1.81
UBXN4-208ENST00000490163 NEK3P51956 506 aa3.73□□□□□ -1.81
UBXN4-208ENST00000490163 RELBQ01201 579 aa3.73□□□□□ -1.81
UBXN4-208ENST00000490163 PDE4BQ07343 736 aa3.73□□□□□ -1.81
UBXN4-208ENST00000490163 ARID5BQ14865 1188 aa3.73□□□□□ -1.81
UBXN4-208ENST00000490163 ZNF610Q8N9Z0 462 aa3.73□□□□□ -1.81
UBXN4-208ENST00000490163 MFSD2AQ8NA29 543 aa3.73□□□□□ -1.81
UBXN4-208ENST00000490163 ATL2Q8NHH9 583 aa3.73□□□□□ -1.81
UBXN4-208ENST00000490163 CYB5D2Q8WUJ1 264 aa3.73□□□□□ -1.81
UBXN4-208ENST00000490163 HOXB13Q92826 284 aaPredicted RBP3.73□□□□□ -1.81
UBXN4-208ENST00000490163 JARID2Q92833 1246 aaPredicted RBP3.73□□□□□ -1.81
UBXN4-208ENST00000490163 HSPBAP1Q96EW2 488 aa3.73□□□□□ -1.81
UBXN4-208ENST00000490163 DDX11Q96FC9 970 aa3.73□□□□□ -1.81
UBXN4-208ENST00000490163 GPR62Q9BZJ7 368 aa3.73□□□□□ -1.81
UBXN4-208ENST00000490163 SMOC1Q9H4F8 434 aa3.73□□□□□ -1.81
UBXN4-208ENST00000490163 DNMT3LQ9UJW3 386 aa3.73□□□□□ -1.81
UBXN4-208ENST00000490163 SPO11Q9Y5K1 396 aa3.73□□□□□ -1.81
UBXN4-208ENST00000490163 ZNF500O60304 480 aaPredicted RBP3.72□□□□□ -1.81
UBXN4-208ENST00000490163 SMNDC1O75940 238 aaKnown RBP eCLIP3.72□□□□□ -1.81
UBXN4-208ENST00000490163 EPHA1P21709 976 aa3.72□□□□□ -1.81
UBXN4-208ENST00000490163 FNTBP49356 437 aa3.72□□□□□ -1.81
UBXN4-208ENST00000490163 YARSP54577 528 aaKnown RBP3.72□□□□□ -1.81
UBXN4-208ENST00000490163 SETDB1Q15047 1291 aa3.72□□□□□ -1.81
UBXN4-208ENST00000490163 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.72□□□□□ -1.817e-31■■□□□ 14.3
UBXN4-208ENST00000490163 IL31Q6EBC2 164 aa3.72□□□□□ -1.81
UBXN4-208ENST00000490163 GTF2IRD2BQ6EKJ0 949 aa3.72□□□□□ -1.81
UBXN4-208ENST00000490163 MMS22LQ6ZRQ5 1243 aa3.72□□□□□ -1.81
UBXN4-208ENST00000490163 UBE2R2Q712K3 238 aaPredicted RBP3.72□□□□□ -1.81
UBXN4-208ENST00000490163 GTF2IRD2Q86UP8 949 aa3.72□□□□□ -1.81
UBXN4-208ENST00000490163 NOSTRINQ8IVI9 506 aa3.72□□□□□ -1.81
UBXN4-208ENST00000490163 PCDH19Q8TAB3 1148 aa3.72□□□□□ -1.81
UBXN4-208ENST00000490163 DIO2Q92813 273 aa3.72□□□□□ -1.81
UBXN4-208ENST00000490163 FNIP2Q9P278 1114 aa3.72□□□□□ -1.81
UBXN4-208ENST00000490163 POLG2Q9UHN1 485 aa3.72□□□□□ -1.81
UBXN4-208ENST00000490163 PPFIA3O75145 1194 aa3.72□□□□□ -1.81
UBXN4-208ENST00000490163 FKBP9O95302 570 aa3.72□□□□□ -1.81
UBXN4-208ENST00000490163 CYP11A1P05108 521 aa3.72□□□□□ -1.81
UBXN4-208ENST00000490163 HSPA6P17066 643 aa3.72□□□□□ -1.81
UBXN4-208ENST00000490163 TMEM177Q53S58 311 aa3.72□□□□□ -1.81
UBXN4-208ENST00000490163 ZNF280DQ6N043 979 aa3.72□□□□□ -1.81
UBXN4-208ENST00000490163 FKBP9P1Q75LS8 142 aa3.72□□□□□ -1.81
UBXN4-208ENST00000490163 ARMCX6Q7L4S7 300 aa3.72□□□□□ -1.81
UBXN4-208ENST00000490163 LYSMD2Q8IV50 215 aa3.72□□□□□ -1.81
UBXN4-208ENST00000490163 MCMBPQ9BTE3 642 aa3.72□□□□□ -1.81
UBXN4-208ENST00000490163 DNAJB12Q9NXW2 375 aaKnown RBP3.72□□□□□ -1.81
UBXN4-208ENST00000490163 ZBTB21Q9ULJ3 1066 aa3.72□□□□□ -1.81
UBXN4-208ENST00000490163 PBRM1Q86U86 1689 aa3.72□□□□□ -1.81
UBXN4-208ENST00000490163 TRPA1O75762 1119 aa3.72□□□□□ -1.81
UBXN4-208ENST00000490163 ECEL1O95672 775 aa3.72□□□□□ -1.81
UBXN4-208ENST00000490163 DLGAP3O95886 979 aa3.72□□□□□ -1.81
UBXN4-208ENST00000490163 MYF5P13349 255 aa3.72□□□□□ -1.81
UBXN4-208ENST00000490163 ZNF445P59923 1031 aa3.72□□□□□ -1.81
UBXN4-208ENST00000490163 MLECQ14165 292 aa3.72□□□□□ -1.81
UBXN4-208ENST00000490163 CFAP161Q6P656 301 aa3.72□□□□□ -1.81
UBXN4-208ENST00000490163 HID1Q8IV36 788 aa3.72□□□□□ -1.81
UBXN4-208ENST00000490163 CRACR2BQ8N4Y2 399 aaPredicted RBP3.72□□□□□ -1.81
UBXN4-208ENST00000490163 SLC7A3Q8WY07 619 aa3.72□□□□□ -1.81
UBXN4-208ENST00000490163 CCDC74BQ96LY2 380 aa3.72□□□□□ -1.81
UBXN4-208ENST00000490163 ZMAT4Q9H898 229 aa3.72□□□□□ -1.81
UBXN4-208ENST00000490163 OXSMQ9NWU1 459 aa3.72□□□□□ -1.81
UBXN4-208ENST00000490163 C9orf78Q9NZ63 289 aaPredicted RBP3.72□□□□□ -1.81
UBXN4-208ENST00000490163 CGGBP1Q9UFW8 167 aaPredicted RBP3.72□□□□□ -1.81
UBXN4-208ENST00000490163 X6R8D5 127 aa3.72□□□□□ -1.81
UBXN4-208ENST00000490163 SYNJ1O43426 1573 aa3.72□□□□□ -1.81
UBXN4-208ENST00000490163 RNF225M0QZC1 329 aaPredicted RBP3.71□□□□□ -1.81
UBXN4-208ENST00000490163 FAM155BO75949 473 aa3.71□□□□□ -1.81
UBXN4-208ENST00000490163 CCDC93Q567U6 631 aa3.71□□□□□ -1.81
UBXN4-208ENST00000490163 WDR45BQ5MNZ6 344 aa3.71□□□□□ -1.81
UBXN4-208ENST00000490163 SPATA1Q5VX52 437 aa3.71□□□□□ -1.81
UBXN4-208ENST00000490163 ICE2Q659A1 982 aa3.71□□□□□ -1.81
UBXN4-208ENST00000490163 IQCEQ6IPM2 695 aa3.71□□□□□ -1.81
UBXN4-208ENST00000490163 SPOCD1Q6ZMY3 1216 aa3.71□□□□□ -1.81
UBXN4-208ENST00000490163 WAPLQ7Z5K2 1190 aa3.71□□□□□ -1.81
UBXN4-208ENST00000490163 COLGALT2Q8IYK4 626 aa3.71□□□□□ -1.81
UBXN4-208ENST00000490163 KCT2Q8NC54 265 aa3.71□□□□□ -1.81
UBXN4-208ENST00000490163 SDCCAG3Q96C92 435 aa3.71□□□□□ -1.81
UBXN4-208ENST00000490163 AAASQ9NRG9 546 aa3.71□□□□□ -1.81
UBXN4-208ENST00000490163 SPTLC3Q9NUV7 552 aa3.71□□□□□ -1.81
UBXN4-208ENST00000490163 LRRFIP2Q9Y608 721 aaKnown RBP3.71□□□□□ -1.81
UBXN4-208ENST00000490163 WASF2Q9Y6W5 498 aa3.71□□□□□ -1.81
UBXN4-208ENST00000490163 MYO1FO00160 1098 aa3.71□□□□□ -1.82
UBXN4-208ENST00000490163 GOLIM4O00461 696 aa3.71□□□□□ -1.82
UBXN4-208ENST00000490163 B3GALT2O43825 422 aa3.71□□□□□ -1.82
UBXN4-208ENST00000490163 HNRNPLP14866 589 aaKnown RBP eCLIP3.71□□□□□ -1.82
UBXN4-208ENST00000490163 FGFR3P22607 806 aa3.71□□□□□ -1.82
UBXN4-208ENST00000490163 PHKA2P46019 1235 aa3.71□□□□□ -1.82
UBXN4-208ENST00000490163 ARL4CP56559 192 aa3.71□□□□□ -1.82
UBXN4-208ENST00000490163 RNF4P78317 190 aa3.71□□□□□ -1.82
UBXN4-208ENST00000490163 MPP1Q00013 466 aa3.71□□□□□ -1.82
UBXN4-208ENST00000490163 PICALMQ13492 652 aa3.71□□□□□ -1.82
UBXN4-208ENST00000490163 SUZ12Q15022 739 aaKnown RBP3.71□□□□□ -1.82
UBXN4-208ENST00000490163 PNMA8AQ86V59 439 aaPredicted RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms