RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 CAV1Q03135 178 aa9.63□□□□□ -0.87
LSAMP-205ENST00000490035 USH1GQ495M9 461 aa9.63□□□□□ -0.87
LSAMP-205ENST00000490035 GIMAP8Q8ND71 665 aaPredicted RBP9.63□□□□□ -0.87
LSAMP-205ENST00000490035 POMGNT1Q8WZA1 660 aa9.63□□□□□ -0.87
LSAMP-205ENST00000490035 TMEM2Q9UHN6 1383 aa9.63□□□□□ -0.87
LSAMP-205ENST00000490035 GSTA1P08263 222 aa9.63□□□□□ -0.87
LSAMP-205ENST00000490035 GSTA2P09210 222 aa9.63□□□□□ -0.87
LSAMP-205ENST00000490035 PDE6AP16499 860 aa9.63□□□□□ -0.87
LSAMP-205ENST00000490035 ELMSAN1Q6PJG2 1045 aa9.63□□□□□ -0.87
LSAMP-205ENST00000490035 EP400NLQ6ZTU2 488 aa9.63□□□□□ -0.87
LSAMP-205ENST00000490035 G2E3Q7L622 706 aa9.63□□□□□ -0.87
LSAMP-205ENST00000490035 SMCR8Q8TEV9 937 aaPredicted RBP9.63□□□□□ -0.87
LSAMP-205ENST00000490035 TRIM31Q9BZY9 425 aa9.63□□□□□ -0.87
LSAMP-205ENST00000490035 THAP9Q9H5L6 903 aa9.63□□□□□ -0.87
LSAMP-205ENST00000490035 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.63□□□□□ -0.87
LSAMP-205ENST00000490035 MAP3K4Q9Y6R4 1608 aa9.62□□□□□ -0.87
LSAMP-205ENST00000490035 LARP4BQ92615 738 aaKnown RBP9.62□□□□□ -0.87
LSAMP-205ENST00000490035 MAP4K1Q92918 833 aa9.62□□□□□ -0.87
LSAMP-205ENST00000490035 TUBGCP2Q9BSJ2 902 aa9.62□□□□□ -0.87
LSAMP-205ENST00000490035 BIN2Q9UBW5 565 aaPredicted RBP9.62□□□□□ -0.87
LSAMP-205ENST00000490035 PIK3CAP42336 1068 aa9.62□□□□□ -0.87
LSAMP-205ENST00000490035 MYL7Q01449 175 aa9.62□□□□□ -0.87
LSAMP-205ENST00000490035 PTGDRQ13258 359 aa9.62□□□□□ -0.87
LSAMP-205ENST00000490035 PRR16Q569H4 304 aa9.62□□□□□ -0.87
LSAMP-205ENST00000490035 MTA3Q9BTC8 594 aa9.62□□□□□ -0.87
LSAMP-205ENST00000490035 TRIM15Q9C019 465 aa9.62□□□□□ -0.87
LSAMP-205ENST00000490035 MTMR6Q9Y217 621 aa9.62□□□□□ -0.87
LSAMP-205ENST00000490035 PDE8BO95263 885 aa9.62□□□□□ -0.87
LSAMP-205ENST00000490035 CTDSPL2Q05D32 466 aa9.62□□□□□ -0.87
LSAMP-205ENST00000490035 RBBP5Q15291 538 aaKnown RBP9.62□□□□□ -0.87
LSAMP-205ENST00000490035 FAM102BQ5T8I3 360 aa9.62□□□□□ -0.87
LSAMP-205ENST00000490035 USP40Q9NVE5 1235 aa9.62□□□□□ -0.87
LSAMP-205ENST00000490035 LRRD1A4D1F6 860 aa9.62□□□□□ -0.87
LSAMP-205ENST00000490035 AFPP02771 609 aaKnown RBP9.62□□□□□ -0.87
LSAMP-205ENST00000490035 TMTC3Q6ZXV5 915 aa9.62□□□□□ -0.87
LSAMP-205ENST00000490035 PROM2Q8N271 834 aa9.62□□□□□ -0.87
LSAMP-205ENST00000490035 DAAM1Q9Y4D1 1078 aa9.62□□□□□ -0.87
LSAMP-205ENST00000490035 PLEKHG2Q9H7P9 1386 aa9.62□□□□□ -0.87
LSAMP-205ENST00000490035 PGRMC1O00264 195 aaKnown RBP9.62□□□□□ -0.87
LSAMP-205ENST00000490035 MMEL1Q495T6 779 aa9.62□□□□□ -0.87
LSAMP-205ENST00000490035 DPY19L2Q6NUT2 758 aa9.62□□□□□ -0.87
LSAMP-205ENST00000490035 TTC39CQ8N584 583 aa9.62□□□□□ -0.87
LSAMP-205ENST00000490035 ACCSQ96QU6 501 aa9.62□□□□□ -0.87
LSAMP-205ENST00000490035 BEGAINQ9BUH8 593 aa9.62□□□□□ -0.87
LSAMP-205ENST00000490035 TECP42680 631 aa9.62□□□□□ -0.87
LSAMP-205ENST00000490035 CC2D2BQ6DHV5 1058 aa9.62□□□□□ -0.87
LSAMP-205ENST00000490035 ZFP91Q96JP5 570 aaPredicted RBP9.62□□□□□ -0.87
LSAMP-205ENST00000490035 USP44Q9H0E7 712 aa9.62□□□□□ -0.87
LSAMP-205ENST00000490035 INTS9Q9NV88 658 aaKnown RBP9.62□□□□□ -0.87
LSAMP-205ENST00000490035 TNKSO95271 1327 aa9.62□□□□□ -0.87
LSAMP-205ENST00000490035 SEC24BO95487 1268 aa9.62□□□□□ -0.87
LSAMP-205ENST00000490035 ARHGAP44Q17R89 818 aa9.62□□□□□ -0.87
LSAMP-205ENST00000490035 MIS18BP1Q6P0N0 1132 aa9.62□□□□□ -0.87
LSAMP-205ENST00000490035 PRPF38AQ8NAV1 312 aaKnown RBP9.62□□□□□ -0.87
LSAMP-205ENST00000490035 MED10Q9BTT4 135 aa9.62□□□□□ -0.87
LSAMP-205ENST00000490035 NLRP1Q9C000 1473 aa9.61□□□□□ -0.87
LSAMP-205ENST00000490035 USP17L12C9JPN9 530 aa9.61□□□□□ -0.87
LSAMP-205ENST00000490035 USP17L21D6R901 530 aa9.61□□□□□ -0.87
LSAMP-205ENST00000490035 SERPING1P05155 500 aa9.61□□□□□ -0.87
LSAMP-205ENST00000490035 STX1BP61266 288 aa9.61□□□□□ -0.87
LSAMP-205ENST00000490035 MRGBPQ9NV56 204 aa9.61□□□□□ -0.87
LSAMP-205ENST00000490035 BAIAP2L1Q9UHR4 511 aa9.61□□□□□ -0.87
LSAMP-205ENST00000490035 CCDC188H7C350 402 aa9.61□□□□□ -0.87
LSAMP-205ENST00000490035 HEXIM1O94992 359 aaKnown RBP9.61□□□□□ -0.87
LSAMP-205ENST00000490035 FGAP02671 866 aa9.61□□□□□ -0.87
LSAMP-205ENST00000490035 XKR9Q5GH70 373 aa9.61□□□□□ -0.87
LSAMP-205ENST00000490035 ZMYM1Q5SVZ6 1142 aa9.61□□□□□ -0.87
LSAMP-205ENST00000490035 PLCD3Q8N3E9 789 aa9.61□□□□□ -0.87
LSAMP-205ENST00000490035 BCAS4Q8TDM0 211 aa9.61□□□□□ -0.87
LSAMP-205ENST00000490035 CNOT6LQ96LI5 555 aaKnown RBP9.61□□□□□ -0.87
LSAMP-205ENST00000490035 TXNDC9O14530 226 aa9.61□□□□□ -0.87
LSAMP-205ENST00000490035 DHX38Q92620 1227 aaKnown RBP9.61□□□□□ -0.87
LSAMP-205ENST00000490035 TSPYL2Q9H2G4 693 aaPredicted RBP9.61□□□□□ -0.87
LSAMP-205ENST00000490035 ERVV-1B6SEH8 477 aa9.61□□□□□ -0.87
LSAMP-205ENST00000490035 RFC1P35251 1148 aaPredicted RBP9.61□□□□□ -0.87
LSAMP-205ENST00000490035 GNGT1P63211 74 aa9.61□□□□□ -0.87
LSAMP-205ENST00000490035 C6orf118Q5T5N4 469 aa9.61□□□□□ -0.87
LSAMP-205ENST00000490035 ATG16L1Q676U5 607 aa9.61□□□□□ -0.87
LSAMP-205ENST00000490035 SLFN12LQ6IEE8 588 aa9.61□□□□□ -0.87
LSAMP-205ENST00000490035 KIAA1586Q9HCI6 787 aa9.61□□□□□ -0.87
LSAMP-205ENST00000490035 NLRC4Q9NPP4 1024 aa9.61□□□□□ -0.87
LSAMP-205ENST00000490035 ADKP55263 362 aaKnown RBP9.61□□□□□ -0.87
LSAMP-205ENST00000490035 RHOT2Q8IXI1 618 aa9.61□□□□□ -0.87
LSAMP-205ENST00000490035 EXOC4Q96A65 974 aa9.61□□□□□ -0.87
LSAMP-205ENST00000490035 BCL2L12Q9HB09 334 aa9.61□□□□□ -0.87
LSAMP-205ENST00000490035 TMEM63CQ9P1W3 806 aa9.61□□□□□ -0.87
LSAMP-205ENST00000490035 GJA3Q9Y6H8 435 aa9.61□□□□□ -0.87
LSAMP-205ENST00000490035 BBOX1O75936 387 aa9.61□□□□□ -0.87
LSAMP-205ENST00000490035 ADCY2Q08462 1091 aa9.61□□□□□ -0.87
LSAMP-205ENST00000490035 FAM193BQ96PV7 902 aaPredicted RBP9.61□□□□□ -0.87
LSAMP-205ENST00000490035 ZNF148Q9UQR1 794 aa9.61□□□□□ -0.87
LSAMP-205ENST00000490035 ARHGAP42A6NI28 874 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 PDIA3P30101 505 aaKnown RBP9.6□□□□□ -0.87
LSAMP-205ENST00000490035 CYP2J2P51589 502 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 RAD51AP2Q09MP3 1159 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 MAPK8IP2Q13387 824 aaPredicted RBP9.6□□□□□ -0.87
LSAMP-205ENST00000490035 LRCH2Q5VUJ6 765 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 EMBQ6PCB8 327 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 RASEFQ8IZ41 740 aa9.6□□□□□ -0.87
LSAMP-205ENST00000490035 KCNJ14Q9UNX9 436 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms