RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 GMLQ99445 158 aa6.27□□□□□ -1.41
HMGN1-218ENST00000490032 IGSF5Q9NSI5 407 aa6.27□□□□□ -1.41
HMGN1-218ENST00000490032 NUDT5Q9UKK9 219 aa6.27□□□□□ -1.41
HMGN1-218ENST00000490032 TBX1O43435 398 aa6.26□□□□□ -1.41
HMGN1-218ENST00000490032 ZBTB7AO95365 584 aa6.26□□□□□ -1.41
HMGN1-218ENST00000490032 CAPNS1P04632 268 aa6.26□□□□□ -1.41
HMGN1-218ENST00000490032 ITGAVP06756 1048 aa6.26□□□□□ -1.41
HMGN1-218ENST00000490032 HOXC12P31275 282 aa6.26□□□□□ -1.41
HMGN1-218ENST00000490032 HTRA3P83110 453 aa6.26□□□□□ -1.41
HMGN1-218ENST00000490032 FOXO4P98177 505 aa6.26□□□□□ -1.41
HMGN1-218ENST00000490032 INF2Q27J81 1249 aa6.26□□□□□ -1.41
HMGN1-218ENST00000490032 E4F1Q66K89 784 aaPredicted RBP6.26□□□□□ -1.41
HMGN1-218ENST00000490032 IQCEQ6IPM2 695 aa6.26□□□□□ -1.41
HMGN1-218ENST00000490032 TP53I13Q8NBR0 393 aaPredicted RBP6.26□□□□□ -1.41
HMGN1-218ENST00000490032 BTN2A2Q8WVV5 523 aa6.26□□□□□ -1.41
HMGN1-218ENST00000490032 CPA5Q8WXQ8 436 aa6.26□□□□□ -1.41
HMGN1-218ENST00000490032 ALG3Q92685 438 aa6.26□□□□□ -1.41
HMGN1-218ENST00000490032 PPP1R14AQ96A00 147 aa6.26□□□□□ -1.41
HMGN1-218ENST00000490032 RXFP1Q9HBX9 757 aa6.26□□□□□ -1.41
HMGN1-218ENST00000490032 FFAR3O14843 346 aa6.25□□□□□ -1.41
HMGN1-218ENST00000490032 DDAH1O94760 285 aa6.25□□□□□ -1.41
HMGN1-218ENST00000490032 PLA2G1BP04054 148 aaKnown RBP6.25□□□□□ -1.41
HMGN1-218ENST00000490032 FUCA1P04066 466 aa6.25□□□□□ -1.41
HMGN1-218ENST00000490032 PMLP29590 882 aa6.25□□□□□ -1.41
HMGN1-218ENST00000490032 TESK1Q15569 626 aa6.25□□□□□ -1.41
HMGN1-218ENST00000490032 VMACQ2NL98 169 aa6.25□□□□□ -1.41
HMGN1-218ENST00000490032 SV2CQ496J9 727 aa6.25□□□□□ -1.41
HMGN1-218ENST00000490032 VWA3BQ502W6 1294 aa6.25□□□□□ -1.41
HMGN1-218ENST00000490032 B3GNT8Q7Z7M8 397 aa6.25□□□□□ -1.41
HMGN1-218ENST00000490032 SP8Q8IXZ3 490 aa6.25□□□□□ -1.41
HMGN1-218ENST00000490032 KREMEN2Q8NCW0 462 aa6.25□□□□□ -1.41
HMGN1-218ENST00000490032 FNIP1Q8TF40 1166 aa6.25□□□□□ -1.41
HMGN1-218ENST00000490032 XYLT2Q9H1B5 865 aa6.25□□□□□ -1.41
HMGN1-218ENST00000490032 LUC7LQ9NQ29 371 aaKnown RBP6.25□□□□□ -1.41
HMGN1-218ENST00000490032 A0A0G2JLL6 359 aaPredicted RBP6.24□□□□□ -1.41
HMGN1-218ENST00000490032 ARNTLO00327 626 aa6.24□□□□□ -1.41
HMGN1-218ENST00000490032 SASH1O94885 1247 aa6.24□□□□□ -1.41
HMGN1-218ENST00000490032 GJB6O95452 261 aa6.24□□□□□ -1.41
HMGN1-218ENST00000490032 CTSWP56202 376 aa6.24□□□□□ -1.41
HMGN1-218ENST00000490032 Q8N1Y9 231 aa6.24□□□□□ -1.41
HMGN1-218ENST00000490032 USP33Q8TEY7 942 aa6.24□□□□□ -1.41
HMGN1-218ENST00000490032 CCDC140Q96MF4 163 aa6.24□□□□□ -1.41
HMGN1-218ENST00000490032 KRTAP4-9Q9BYQ8 210 aa6.24□□□□□ -1.41
HMGN1-218ENST00000490032 EPN3Q9H201 632 aa6.24□□□□□ -1.41
HMGN1-218ENST00000490032 CPP00450 1065 aa6.23□□□□□ -1.41
HMGN1-218ENST00000490032 NTRK1P04629 796 aa6.23□□□□□ -1.41
HMGN1-218ENST00000490032 DNAJA1P31689 397 aaKnown RBP6.23□□□□□ -1.41
HMGN1-218ENST00000490032 MC3RP41968 323 aa6.23□□□□□ -1.41
HMGN1-218ENST00000490032 RBM25P49756 843 aaKnown RBP6.23□□□□□ -1.41
HMGN1-218ENST00000490032 ACBD5Q5T8D3 534 aaPredicted RBP6.23□□□□□ -1.41
HMGN1-218ENST00000490032 SAPCD2Q86UD0 394 aa6.23□□□□□ -1.41
HMGN1-218ENST00000490032 DCP2Q8IU60 420 aaKnown RBP6.23□□□□□ -1.41
HMGN1-218ENST00000490032 CCDC103Q8IW40 242 aa6.23□□□□□ -1.41
HMGN1-218ENST00000490032 BCAS3Q9H6U6 928 aa6.23□□□□□ -1.41
HMGN1-218ENST00000490032 RTEL1Q9NZ71 1219 aa6.23□□□□□ -1.41
HMGN1-218ENST00000490032 MARCH2Q9P0N8 246 aa6.23□□□□□ -1.41
HMGN1-218ENST00000490032 LRP2BPQ9P2M1 347 aa6.23□□□□□ -1.41
HMGN1-218ENST00000490032 TMEFF2Q9UIK5 374 aaPredicted RBP6.23□□□□□ -1.41
HMGN1-218ENST00000490032 FAN1Q9Y2M0 1017 aa6.23□□□□□ -1.41
HMGN1-218ENST00000490032 PMF1-BGLAPU3KQ54 211 aa6.23□□□□□ -1.41
HMGN1-218ENST00000490032 OTOL1A6NHN0 477 aaPredicted RBP6.22□□□□□ -1.41
HMGN1-218ENST00000490032 SNRPB2P08579 225 aaKnown RBP6.22□□□□□ -1.41
HMGN1-218ENST00000490032 GFRA1P56159 465 aa6.22□□□□□ -1.41
HMGN1-218ENST00000490032 RPL11P62913 178 aaKnown RBP6.22□□□□□ -1.41
HMGN1-218ENST00000490032 CACNB2Q08289 660 aaPredicted RBP6.22□□□□□ -1.41
HMGN1-218ENST00000490032 KCNAB2Q13303 367 aa6.22□□□□□ -1.41
HMGN1-218ENST00000490032 SLC10A6Q3KNW5 377 aa6.22□□□□□ -1.41
HMGN1-218ENST00000490032 EEPD1Q7L9B9 569 aa6.22□□□□□ -1.41
HMGN1-218ENST00000490032 RIOX2Q8IUF8 465 aa6.22□□□□□ -1.41
HMGN1-218ENST00000490032 TEX2Q8IWB9 1127 aa6.22□□□□□ -1.41
HMGN1-218ENST00000490032 DIO2Q92813 273 aa6.22□□□□□ -1.41
HMGN1-218ENST00000490032 C1orf159Q96HA4 380 aa6.22□□□□□ -1.41
HMGN1-218ENST00000490032 SIT1Q9Y3P8 196 aa6.22□□□□□ -1.41
HMGN1-218ENST00000490032 TIMM13Q9Y5L4 95 aaPredicted RBP6.22□□□□□ -1.41
HMGN1-218ENST00000490032 X6R8D5 127 aa6.22□□□□□ -1.41
HMGN1-218ENST00000490032 SH3D21A4FU49 640 aa6.21□□□□□ -1.42
HMGN1-218ENST00000490032 C22orf46C9J442 243 aa6.21□□□□□ -1.42
HMGN1-218ENST00000490032 MEFVO15553 781 aaPredicted RBP6.21□□□□□ -1.42
HMGN1-218ENST00000490032 KLF4O43474 513 aa6.21□□□□□ -1.42
HMGN1-218ENST00000490032 ECI1P42126 302 aa6.21□□□□□ -1.42
HMGN1-218ENST00000490032 SLC6A11P48066 632 aa6.21□□□□□ -1.42
HMGN1-218ENST00000490032 GTF2A2P52657 109 aa6.21□□□□□ -1.42
HMGN1-218ENST00000490032 DLX2Q07687 328 aaPredicted RBP6.21□□□□□ -1.42
HMGN1-218ENST00000490032 SF1Q15637 639 aaKnown RBP6.21□□□□□ -1.42
HMGN1-218ENST00000490032 CELF2-AS1Q8N7Q2 184 aa6.21□□□□□ -1.42
HMGN1-218ENST00000490032 HNRNPLLQ8WVV9 542 aaKnown RBP6.21□□□□□ -1.42
HMGN1-218ENST00000490032 NCANO14594 1321 aa6.21□□□□□ -1.42
HMGN1-218ENST00000490032 SGSM2O43147 1006 aa6.2□□□□□ -1.42
HMGN1-218ENST00000490032 SLURP1P55000 103 aa6.2□□□□□ -1.42
HMGN1-218ENST00000490032 PRSS53Q2L4Q9 553 aa6.2□□□□□ -1.42
HMGN1-218ENST00000490032 SLC35F1Q5T1Q4 408 aa6.2□□□□□ -1.42
HMGN1-218ENST00000490032 MROH9Q5TGP6 573 aa6.2□□□□□ -1.42
HMGN1-218ENST00000490032 DENND5AQ6IQ26 1287 aa6.2□□□□□ -1.42
HMGN1-218ENST00000490032 LIPIQ6XZB0 460 aa6.2□□□□□ -1.42
HMGN1-218ENST00000490032 ANKS3Q6ZW76 656 aa6.2□□□□□ -1.42
HMGN1-218ENST00000490032 NLRP10Q86W26 655 aa6.2□□□□□ -1.42
HMGN1-218ENST00000490032 MIB1Q86YT6 1006 aa6.2□□□□□ -1.42
HMGN1-218ENST00000490032 SYT8Q8NBV8 401 aa6.2□□□□□ -1.42
HMGN1-218ENST00000490032 SMARCC2Q8TAQ2 1214 aa6.2□□□□□ -1.42
HMGN1-218ENST00000490032 FEZF2Q8TBJ5 459 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms