RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 NAV2Q8IVL1 2488 aa8.83□□□□□ -1
COL9A1-209ENST00000489861 ATP2A1O14983 1001 aa8.82□□□□□ -1
COL9A1-209ENST00000489861 LGR5O75473 907 aa8.82□□□□□ -1
COL9A1-209ENST00000489861 CT47B1P0C2W7 299 aaPredicted RBP8.82□□□□□ -1
COL9A1-209ENST00000489861 SELPP16109 830 aa8.82□□□□□ -1
COL9A1-209ENST00000489861 IKBKEQ14164 716 aa8.82□□□□□ -1
COL9A1-209ENST00000489861 NFRKBQ6P4R8 1299 aa8.82□□□□□ -1
COL9A1-209ENST00000489861 LRRC8DQ7L1W4 858 aa8.82□□□□□ -1
COL9A1-209ENST00000489861 AFAP1L1Q8TED9 768 aa8.82□□□□□ -1
COL9A1-209ENST00000489861 NUP88Q99567 741 aaPredicted RBP8.82□□□□□ -1
COL9A1-209ENST00000489861 MTG1Q9BT17 334 aaPredicted RBP8.82□□□□□ -1
COL9A1-209ENST00000489861 RAVER2Q9HCJ3 691 aaKnown RBP8.82□□□□□ -1
COL9A1-209ENST00000489861 POLR3EQ9NVU0 708 aa8.82□□□□□ -1
COL9A1-209ENST00000489861 USP15Q9Y4E8 981 aaPredicted RBP8.82□□□□□ -1
COL9A1-209ENST00000489861 ZZEF1O43149 2961 aa8.82□□□□□ -1
COL9A1-209ENST00000489861 UNC79Q9P2D8 2635 aa8.82□□□□□ -1
COL9A1-209ENST00000489861 FRYQ5TBA9 3013 aa8.81□□□□□ -1
COL9A1-209ENST00000489861 CSPG5O95196 566 aa8.81□□□□□ -1
COL9A1-209ENST00000489861 POLR3DP05423 398 aaPredicted RBP8.81□□□□□ -1
COL9A1-209ENST00000489861 UQCRFS1P1P0C7P4 283 aa8.81□□□□□ -1
COL9A1-209ENST00000489861 CYP2D6P10635 497 aa8.81□□□□□ -1
COL9A1-209ENST00000489861 EEF2P13639 858 aaKnown RBP8.81□□□□□ -1
COL9A1-209ENST00000489861 NDUFV1P49821 464 aa8.81□□□□□ -1
COL9A1-209ENST00000489861 MBTPS1Q14703 1052 aa8.81□□□□□ -1
COL9A1-209ENST00000489861 RSPO4Q2I0M5 234 aaPredicted RBP8.81□□□□□ -1
COL9A1-209ENST00000489861 ALDH1L2Q3SY69 923 aa8.81□□□□□ -1
COL9A1-209ENST00000489861 TRAF7Q6Q0C0 670 aa8.81□□□□□ -1
COL9A1-209ENST00000489861 MYOCDQ8IZQ8 938 aa8.81□□□□□ -1
COL9A1-209ENST00000489861 CAGE1Q8TC20 777 aa8.81□□□□□ -1
COL9A1-209ENST00000489861 DYNLL2Q96FJ2 89 aa8.81□□□□□ -1
COL9A1-209ENST00000489861 SLF1Q9BQI6 1058 aa8.81□□□□□ -1
COL9A1-209ENST00000489861 PHF7Q9BWX1 381 aaPredicted RBP8.81□□□□□ -1
COL9A1-209ENST00000489861 SH2D4AQ9H788 454 aa8.81□□□□□ -1
COL9A1-209ENST00000489861 MYH4Q9Y623 1939 aa8.81□□□□□ -1
COL9A1-209ENST00000489861 KIAA1671Q9BY89 1806 aa8.8□□□□□ -1
COL9A1-209ENST00000489861 GREB1LQ9C091 1923 aaPredicted RBP8.8□□□□□ -1
COL9A1-209ENST00000489861 ASB14A6NK59 587 aa8.8□□□□□ -1
COL9A1-209ENST00000489861 EFCAB14O75071 495 aa8.8□□□□□ -1
COL9A1-209ENST00000489861 LMNAP02545 664 aaKnown RBP8.8□□□□□ -1
COL9A1-209ENST00000489861 LINC00271P0C7V0 271 aa8.8□□□□□ -1
COL9A1-209ENST00000489861 UBTFL1P0CB47 393 aaPredicted RBP8.8□□□□□ -1
COL9A1-209ENST00000489861 CKBP12277 381 aa8.8□□□□□ -1
COL9A1-209ENST00000489861 ZAP70P43403 619 aa8.8□□□□□ -1
COL9A1-209ENST00000489861 PTPN11Q06124 597 aaPredicted RBP8.8□□□□□ -1
COL9A1-209ENST00000489861 RBL2Q08999 1139 aa8.8□□□□□ -1
COL9A1-209ENST00000489861 COASYQ13057 564 aa8.8□□□□□ -1
COL9A1-209ENST00000489861 CAMK1Q14012 370 aa8.8□□□□□ -1
COL9A1-209ENST00000489861 PTGISQ16647 500 aa8.8□□□□□ -1
COL9A1-209ENST00000489861 DUSP28Q4G0W2 176 aa8.8□□□□□ -1
COL9A1-209ENST00000489861 ASTLQ6HA08 431 aaPredicted RBP8.8□□□□□ -1
COL9A1-209ENST00000489861 KIAA1211Q6ZU35 1233 aa8.8□□□□□ -1
COL9A1-209ENST00000489861 DCLK2Q8N568 766 aa8.8□□□□□ -1
COL9A1-209ENST00000489861 MRPL50Q8N5N7 158 aaKnown RBP8.8□□□□□ -1
COL9A1-209ENST00000489861 CHST13Q8NET6 341 aa8.8□□□□□ -1
COL9A1-209ENST00000489861 KCNG4Q8TDN1 519 aa8.8□□□□□ -1
COL9A1-209ENST00000489861 SMOC2Q9H3U7 446 aa8.8□□□□□ -1
COL9A1-209ENST00000489861 A1CFQ9NQ94 594 aaKnown RBP8.8□□□□□ -1
COL9A1-209ENST00000489861 HOMER2Q9NSB8 354 aa8.8□□□□□ -1
COL9A1-209ENST00000489861 NOD1Q9Y239 953 aa8.8□□□□□ -1
COL9A1-209ENST00000489861 C5orf67F2Z3F1 127 aa8.79□□□□□ -1
COL9A1-209ENST00000489861 CCER2I3L3R5 266 aa8.79□□□□□ -1
COL9A1-209ENST00000489861 RAD21O60216 631 aa8.79□□□□□ -1
COL9A1-209ENST00000489861 BRD1O95696 1058 aa8.79□□□□□ -1
COL9A1-209ENST00000489861 GLP2RO95838 553 aa8.79□□□□□ -1
COL9A1-209ENST00000489861 GDF6Q6KF10 455 aaPredicted RBP8.79□□□□□ -1
COL9A1-209ENST00000489861 ADGRD2Q7Z7M1 963 aa8.79□□□□□ -1
COL9A1-209ENST00000489861 YME1L1Q96TA2 773 aa8.79□□□□□ -1
COL9A1-209ENST00000489861 RIOK1Q9BRS2 568 aaKnown RBP8.79□□□□□ -1
COL9A1-209ENST00000489861 SLC38A10Q9HBR0 1119 aa8.79□□□□□ -1
COL9A1-209ENST00000489861 MCM9Q9NXL9 1143 aa8.79□□□□□ -1
COL9A1-209ENST00000489861 FBXO40Q9UH90 709 aa8.79□□□□□ -1
COL9A1-209ENST00000489861 BARX2Q9UMQ3 279 aaPredicted RBP8.79□□□□□ -1
COL9A1-209ENST00000489861 IGF2RP11717 2491 aa8.78□□□□□ -1
COL9A1-209ENST00000489861 USP17L12C9JPN9 530 aa8.78□□□□□ -1
COL9A1-209ENST00000489861 USP17L21D6R901 530 aa8.78□□□□□ -1
COL9A1-209ENST00000489861 HAX1O00165 279 aa8.78□□□□□ -1
COL9A1-209ENST00000489861 UPP2O95045 317 aa8.78□□□□□ -1
COL9A1-209ENST00000489861 PARNO95453 639 aaKnown RBP8.78□□□□□ -1
COL9A1-209ENST00000489861 AMHP03971 560 aa8.78□□□□□ -1
COL9A1-209ENST00000489861 CTNNB1P35222 781 aa8.78□□□□□ -1
COL9A1-209ENST00000489861 CPT1AP50416 773 aa8.78□□□□□ -1
COL9A1-209ENST00000489861 FXR2P51116 673 aaKnown RBP eCLIP8.78□□□□□ -1
COL9A1-209ENST00000489861 ATXN1P54253 815 aaKnown RBP8.78□□□□□ -1
COL9A1-209ENST00000489861 CHMP4BP1P59074 171 aa8.78□□□□□ -1
COL9A1-209ENST00000489861 ANGPT1Q15389 498 aa8.78□□□□□ -1
COL9A1-209ENST00000489861 CCDC155Q8N6L0 562 aa8.78□□□□□ -1
COL9A1-209ENST00000489861 EFHBQ8N7U6 833 aa8.78□□□□□ -1
COL9A1-209ENST00000489861 PRPF38AQ8NAV1 312 aaKnown RBP8.78□□□□□ -1
COL9A1-209ENST00000489861 KREMEN2Q8NCW0 462 aa8.78□□□□□ -1
COL9A1-209ENST00000489861 DBF4BQ8NFT6 615 aa8.78□□□□□ -1
COL9A1-209ENST00000489861 SUSD6Q92537 303 aa8.78□□□□□ -1
COL9A1-209ENST00000489861 WNT8BQ93098 351 aa8.78□□□□□ -1
COL9A1-209ENST00000489861 TOP1MTQ969P6 601 aa8.78□□□□□ -1
COL9A1-209ENST00000489861 PURBQ96QR8 312 aaKnown RBP8.78□□□□□ -1
COL9A1-209ENST00000489861 API5Q9BZZ5 524 aaKnown RBP8.78□□□□□ -1
COL9A1-209ENST00000489861 LMAN2LQ9H0V9 348 aa8.78□□□□□ -1
COL9A1-209ENST00000489861 GOPCQ9HD26 462 aa8.78□□□□□ -1
COL9A1-209ENST00000489861 GPHNQ9NQX3 736 aaPredicted RBP8.78□□□□□ -1
COL9A1-209ENST00000489861 SH2B1Q9NRF2 756 aaPredicted RBP8.78□□□□□ -1
COL9A1-209ENST00000489861 SPEGQ15772 3267 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms