RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 CCDC47Q96A33 483 aaKnown RBP17.54■□□□□ 0.4
BRD9-208ENST00000489816 CCDC51Q96ER9 411 aa17.54■□□□□ 0.4
BRD9-208ENST00000489816 PNMA5Q96PV4 448 aa17.54■□□□□ 0.4
BRD9-208ENST00000489816 CRACR2AQ9BSW2 395 aa17.54■□□□□ 0.4
BRD9-208ENST00000489816 MYO6Q9UM54 1294 aa17.54■□□□□ 0.4
BRD9-208ENST00000489816 NPHP3-ACAD11A0A0J9YXS1 232 aa17.53■□□□□ 0.4
BRD9-208ENST00000489816 CTAGE15A4D2H0 777 aa17.53■□□□□ 0.4
BRD9-208ENST00000489816 N4BP1O75113 896 aaKnown RBP17.53■□□□□ 0.4
BRD9-208ENST00000489816 CTAGE8P0CG41 777 aa17.53■□□□□ 0.4
BRD9-208ENST00000489816 CTAGE6Q86UF2 777 aa17.53■□□□□ 0.4
BRD9-208ENST00000489816 CTAGE4Q8IX94 777 aa17.53■□□□□ 0.4
BRD9-208ENST00000489816 FUT8Q9BYC5 575 aa17.53■□□□□ 0.4
BRD9-208ENST00000489816 NHEJ1Q9H9Q4 299 aaPredicted RBP17.53■□□□□ 0.4
BRD9-208ENST00000489816 JMJD4Q9H9V9 463 aa17.53■□□□□ 0.4
BRD9-208ENST00000489816 BTAF1O14981 1849 aa17.53■□□□□ 0.4
BRD9-208ENST00000489816 DNM2P50570 870 aa17.53■□□□□ 0.4
BRD9-208ENST00000489816 KCTD19Q17RG1 926 aaPredicted RBP17.53■□□□□ 0.4
BRD9-208ENST00000489816 GALNT17Q6IS24 598 aa17.53■□□□□ 0.4
BRD9-208ENST00000489816 C2CD5Q86YS7 1000 aa17.53■□□□□ 0.4
BRD9-208ENST00000489816 FGFBP2Q9BYJ0 223 aa17.53■□□□□ 0.4
BRD9-208ENST00000489816 PLEKHA4Q9H4M7 779 aa17.53■□□□□ 0.4
BRD9-208ENST00000489816 SERPINB13Q9UIV8 391 aa17.53■□□□□ 0.4
BRD9-208ENST00000489816 EEF1GP26641 437 aaKnown RBP17.52■□□□□ 0.4
BRD9-208ENST00000489816 LARP4BQ92615 738 aaKnown RBP17.52■□□□□ 0.4
BRD9-208ENST00000489816 LZTS2Q9BRK4 669 aa17.52■□□□□ 0.4
BRD9-208ENST00000489816 NLRC4Q9NPP4 1024 aa17.52■□□□□ 0.4
BRD9-208ENST00000489816 TULP1O00294 542 aaPredicted RBP17.52■□□□□ 0.4
BRD9-208ENST00000489816 PLCG2P16885 1265 aa17.52■□□□□ 0.4
BRD9-208ENST00000489816 MATR3P43243 847 aaKnown RBP eCLIP17.52■□□□□ 0.4
BRD9-208ENST00000489816 ARID5AQ03989 594 aa17.52■□□□□ 0.4
BRD9-208ENST00000489816 DDX12PQ92771 950 aa17.52■□□□□ 0.4
BRD9-208ENST00000489816 ZFP91Q96JP5 570 aaPredicted RBP17.52■□□□□ 0.4
BRD9-208ENST00000489816 THAP9Q9H5L6 903 aa17.52■□□□□ 0.4
BRD9-208ENST00000489816 PDE11AQ9HCR9 933 aa17.52■□□□□ 0.4
BRD9-208ENST00000489816 JADE2Q9NQC1 790 aa17.52■□□□□ 0.4
BRD9-208ENST00000489816 CAPN11Q9UMQ6 739 aa17.52■□□□□ 0.4
BRD9-208ENST00000489816 ROBO3Q96MS0 1386 aa17.52■□□□□ 0.4
BRD9-208ENST00000489816 SRGNP10124 158 aa17.52■□□□□ 0.39
BRD9-208ENST00000489816 CXCR5P32302 372 aa17.52■□□□□ 0.39
BRD9-208ENST00000489816 STAT3P40763 770 aa17.52■□□□□ 0.39
BRD9-208ENST00000489816 MIIPQ5JXC2 388 aa17.52■□□□□ 0.39
BRD9-208ENST00000489816 GSPT2Q8IYD1 628 aaKnown RBP17.52■□□□□ 0.39
BRD9-208ENST00000489816 MMS19Q96T76 1030 aa17.52■□□□□ 0.39
BRD9-208ENST00000489816 E9PMD0 336 aa17.51■□□□□ 0.39
BRD9-208ENST00000489816 CRY2Q49AN0 593 aa17.51■□□□□ 0.39
BRD9-208ENST00000489816 JAKMIP2Q96AA8 810 aa17.51■□□□□ 0.39
BRD9-208ENST00000489816 DHTKD1Q96HY7 919 aaPredicted RBP17.51■□□□□ 0.39
BRD9-208ENST00000489816 ZNHIT6Q9NWK9 470 aaKnown RBP17.51■□□□□ 0.39
BRD9-208ENST00000489816 SMARCAL1Q9NZC9 954 aa17.51■□□□□ 0.39
BRD9-208ENST00000489816 H3BQF6 201 aa17.51■□□□□ 0.39
BRD9-208ENST00000489816 PPEF1O14829 653 aaPredicted RBP17.51■□□□□ 0.39
BRD9-208ENST00000489816 PRPHP41219 470 aa17.51■□□□□ 0.39
BRD9-208ENST00000489816 CEP112Q8N8E3 955 aa17.51■□□□□ 0.39
BRD9-208ENST00000489816 RIOX1Q9H6W3 641 aa17.51■□□□□ 0.39
BRD9-208ENST00000489816 BBOX1O75936 387 aa17.5■□□□□ 0.39
BRD9-208ENST00000489816 IPO7O95373 1038 aaKnown RBP17.5■□□□□ 0.39
BRD9-208ENST00000489816 IKQ13123 557 aaPredicted RBP17.5■□□□□ 0.39
BRD9-208ENST00000489816 USH1GQ495M9 461 aa17.5■□□□□ 0.39
BRD9-208ENST00000489816 ZNF622Q969S3 477 aaKnown RBP eCLIP17.5■□□□□ 0.393e-7■■■■□ 23.1
BRD9-208ENST00000489816 LAD1O00515 517 aa17.5■□□□□ 0.39
BRD9-208ENST00000489816 AMPD3Q01432 767 aa17.5■□□□□ 0.39
BRD9-208ENST00000489816 KRT79Q5XKE5 535 aa17.5■□□□□ 0.39
BRD9-208ENST00000489816 RRAGAQ7L523 313 aa17.5■□□□□ 0.39
BRD9-208ENST00000489816 AK8Q96MA6 479 aa17.5■□□□□ 0.39
BRD9-208ENST00000489816 DDX25Q9UHL0 483 aaKnown RBP17.5■□□□□ 0.39
BRD9-208ENST00000489816 MEIS1O00470 390 aa17.5■□□□□ 0.39
BRD9-208ENST00000489816 TRIM14Q14142 442 aa17.5■□□□□ 0.39
BRD9-208ENST00000489816 SKIDA1Q1XH10 827 aa17.5■□□□□ 0.39
BRD9-208ENST00000489816 CDC42EP5Q6NZY7 148 aa17.5■□□□□ 0.39
BRD9-208ENST00000489816 CCDC42Q96M95 316 aa17.5■□□□□ 0.39
BRD9-208ENST00000489816 MTMR9Q96QG7 549 aa17.5■□□□□ 0.39
BRD9-208ENST00000489816 DNAJC7Q99615 494 aa17.5■□□□□ 0.39
BRD9-208ENST00000489816 C7orf25Q9BPX7 421 aa17.5■□□□□ 0.39
BRD9-208ENST00000489816 MLXIPQ9HAP2 919 aa17.5■□□□□ 0.39
BRD9-208ENST00000489816 AFF2P51816 1311 aa17.49■□□□□ 0.39
BRD9-208ENST00000489816 ZNF263O14978 683 aa17.49■□□□□ 0.39
BRD9-208ENST00000489816 TMEM266Q2M3C6 531 aa17.49■□□□□ 0.39
BRD9-208ENST00000489816 CNNM4Q6P4Q7 775 aa17.49■□□□□ 0.39
BRD9-208ENST00000489816 CAGE1Q8TC20 777 aa17.49■□□□□ 0.39
BRD9-208ENST00000489816 DEF6Q9H4E7 631 aa17.49■□□□□ 0.39
BRD9-208ENST00000489816 PSTPIP2Q9H939 334 aa17.49■□□□□ 0.39
BRD9-208ENST00000489816 LAMB1P07942 1786 aa17.49■□□□□ 0.39
BRD9-208ENST00000489816 DLEC1Q9Y238 1755 aa17.49■□□□□ 0.39
BRD9-208ENST00000489816 BICDL2A1A5D9 508 aa17.49■□□□□ 0.39
BRD9-208ENST00000489816 GDF11O95390 407 aa17.49■□□□□ 0.39
BRD9-208ENST00000489816 TTLL1O95922 423 aa17.49■□□□□ 0.39
BRD9-208ENST00000489816 TMC4Q7Z404 712 aa17.49■□□□□ 0.39
BRD9-208ENST00000489816 BCAS3Q9H6U6 928 aa17.49■□□□□ 0.39
BRD9-208ENST00000489816 EHD2Q9NZN4 543 aa17.49■□□□□ 0.39
BRD9-208ENST00000489816 PCDHA12Q9UN75 941 aa17.49■□□□□ 0.39
BRD9-208ENST00000489816 KIAA1024Q9UPX6 916 aa17.49■□□□□ 0.39
BRD9-208ENST00000489816 SHMT1P34896 483 aa17.48■□□□□ 0.39
BRD9-208ENST00000489816 ZNF543Q08ER8 600 aa17.48■□□□□ 0.39
BRD9-208ENST00000489816 SLF2Q8IX21 1173 aa17.48■□□□□ 0.39
BRD9-208ENST00000489816 NDST4Q9H3R1 872 aa17.48■□□□□ 0.39
BRD9-208ENST00000489816 POLRMTO00411 1230 aaKnown RBP17.48■□□□□ 0.39
BRD9-208ENST00000489816 TRAF5O00463 557 aa17.48■□□□□ 0.39
BRD9-208ENST00000489816 DNAAF5Q86Y56 855 aa17.48■□□□□ 0.39
BRD9-208ENST00000489816 SPICE1Q8N0Z3 855 aa17.48■□□□□ 0.39
BRD9-208ENST00000489816 TBC1D22AQ8WUA7 517 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms