RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 AP5M1Q9H0R1 490 aa22.11■■□□□ 1.13
EPHB4-207ENST00000489808 PXMP2Q9NR77 195 aa22.11■■□□□ 1.13
EPHB4-207ENST00000489808 ZMYND8Q9ULU4 1186 aaPredicted RBP22.11■■□□□ 1.13
EPHB4-207ENST00000489808 A0A1W2PQ45 241 aaPredicted RBP22.1■■□□□ 1.13
EPHB4-207ENST00000489808 A0A1W2PQY0 241 aa22.1■■□□□ 1.13
EPHB4-207ENST00000489808 ASGR1P07306 291 aa22.1■■□□□ 1.13
EPHB4-207ENST00000489808 NR3C2P08235 984 aa22.1■■□□□ 1.13
EPHB4-207ENST00000489808 EIF2AK2P19525 551 aaKnown RBP22.1■■□□□ 1.13
EPHB4-207ENST00000489808 CASTP20810 708 aaKnown RBP22.1■■□□□ 1.13
EPHB4-207ENST00000489808 PTGS1P23219 599 aa22.1■■□□□ 1.13
EPHB4-207ENST00000489808 RCAN1P53805 252 aa22.1■■□□□ 1.13
EPHB4-207ENST00000489808 RTP1P59025 263 aa22.1■■□□□ 1.13
EPHB4-207ENST00000489808 SNX17Q15036 470 aa22.1■■□□□ 1.13
EPHB4-207ENST00000489808 STXBP2Q15833 593 aa22.1■■□□□ 1.13
EPHB4-207ENST00000489808 RTN1Q16799 776 aa22.1■■□□□ 1.13
EPHB4-207ENST00000489808 C1orf53Q5VUE5 145 aa22.1■■□□□ 1.13
EPHB4-207ENST00000489808 TLK2Q86UE8 772 aa22.1■■□□□ 1.13
EPHB4-207ENST00000489808 AGXT2Q9BYV1 514 aa22.1■■□□□ 1.13
EPHB4-207ENST00000489808 ZSWIM6Q9HCJ5 1215 aa22.1■■□□□ 1.13
EPHB4-207ENST00000489808 FAM217BQ9NTX9 383 aaPredicted RBP22.1■■□□□ 1.13
EPHB4-207ENST00000489808 hCG_1642624A0A1W2PR95 340 aa22.09■■□□□ 1.13
EPHB4-207ENST00000489808 BEX3Q00994 111 aa22.09■■□□□ 1.13
EPHB4-207ENST00000489808 APOBRQ0VD83 1088 aa22.09■■□□□ 1.13
EPHB4-207ENST00000489808 PPP2R5BQ15173 497 aa22.09■■□□□ 1.13
EPHB4-207ENST00000489808 RUFY3Q7L099 469 aa22.09■■□□□ 1.13
EPHB4-207ENST00000489808 SCFD2Q8WU76 684 aa22.09■■□□□ 1.13
EPHB4-207ENST00000489808 BRF1Q92994 677 aa22.09■■□□□ 1.13
EPHB4-207ENST00000489808 BAZ2BQ9UIF8 2168 aaKnown RBP22.09■■□□□ 1.13
EPHB4-207ENST00000489808 GOLGA8AA7E2F4 631 aa22.08■■□□□ 1.13
EPHB4-207ENST00000489808 GOLGA8BA8MQT2 603 aa22.08■■□□□ 1.13
EPHB4-207ENST00000489808 EIF3JO75822 258 aaKnown RBP22.08■■□□□ 1.13
EPHB4-207ENST00000489808 FUT2Q10981 343 aa22.08■■□□□ 1.13
EPHB4-207ENST00000489808 FSCN1Q16658 493 aaKnown RBP22.08■■□□□ 1.13
EPHB4-207ENST00000489808 PDCD2LQ9BRP1 358 aa22.08■■□□□ 1.13
EPHB4-207ENST00000489808 TM6SF1Q9BZW5 370 aa22.08■■□□□ 1.13
EPHB4-207ENST00000489808 STARD7Q9NQZ5 370 aa22.08■■□□□ 1.13
EPHB4-207ENST00000489808 NAP1L2Q9ULW6 460 aaPredicted RBP22.08■■□□□ 1.13
EPHB4-207ENST00000489808 COLQQ9Y215 455 aaPredicted RBP22.08■■□□□ 1.13
EPHB4-207ENST00000489808 ATP11BQ9Y2G3 1177 aa22.08■■□□□ 1.13
EPHB4-207ENST00000489808 ELP1O95163 1332 aa22.07■■□□□ 1.12
EPHB4-207ENST00000489808 MCM3APO60318 1980 aa22.07■■□□□ 1.12
EPHB4-207ENST00000489808 NKRFO15226 690 aaKnown RBP eCLIP22.07■■□□□ 1.12
EPHB4-207ENST00000489808 SYN1P17600 705 aa22.07■■□□□ 1.12
EPHB4-207ENST00000489808 CDC27P30260 824 aa22.07■■□□□ 1.12
EPHB4-207ENST00000489808 TRIM60Q495X7 471 aa22.07■■□□□ 1.12
EPHB4-207ENST00000489808 CHRDL2Q6WN34 429 aa22.07■■□□□ 1.12
EPHB4-207ENST00000489808 VSIG10LQ86VR7 867 aa22.07■■□□□ 1.12
EPHB4-207ENST00000489808 FCHSD1Q86WN1 690 aa22.07■■□□□ 1.12
EPHB4-207ENST00000489808 GLT1D1Q96MS3 346 aa22.07■■□□□ 1.12
EPHB4-207ENST00000489808 CYP46A1Q9Y6A2 500 aa22.07■■□□□ 1.12
EPHB4-207ENST00000489808 V9GY48 417 aaPredicted RBP22.07■■□□□ 1.12
EPHB4-207ENST00000489808 FRMPD3Q5JV73 1810 aa22.07■■□□□ 1.12
EPHB4-207ENST00000489808 LCTP09848 1927 aa22.07■■□□□ 1.12
EPHB4-207ENST00000489808 ZEB2O60315 1214 aa22.06■■□□□ 1.12
EPHB4-207ENST00000489808 TXNP10599 105 aaKnown RBP22.06■■□□□ 1.12
EPHB4-207ENST00000489808 ADD1P35611 737 aaKnown RBP22.06■■□□□ 1.12
EPHB4-207ENST00000489808 TTLL4Q14679 1199 aa22.06■■□□□ 1.12
EPHB4-207ENST00000489808 CCDC62Q6P9F0 684 aa22.06■■□□□ 1.12
EPHB4-207ENST00000489808 SEPT14Q6ZU15 432 aa22.06■■□□□ 1.12
EPHB4-207ENST00000489808 VTI1AQ96AJ9 217 aa22.06■■□□□ 1.12
EPHB4-207ENST00000489808 CCDC196A0A1B0GTZ2 297 aa22.05■■□□□ 1.12
EPHB4-207ENST00000489808 PIK3CDO00329 1044 aa22.05■■□□□ 1.12
EPHB4-207ENST00000489808 MEIS2O14770 477 aa22.05■■□□□ 1.12
EPHB4-207ENST00000489808 ARIH2O95376 493 aa22.05■■□□□ 1.12
EPHB4-207ENST00000489808 METAP2P50579 478 aaKnown RBP eCLIP22.05■■□□□ 1.128e-7■■■□□ 16.3
EPHB4-207ENST00000489808 EVCP57679 992 aa22.05■■□□□ 1.12
EPHB4-207ENST00000489808 TLE2Q04725 743 aa22.05■■□□□ 1.12
EPHB4-207ENST00000489808 PGM5Q15124 567 aa22.05■■□□□ 1.12
EPHB4-207ENST00000489808 USP17L6PQ6QN14 398 aa22.05■■□□□ 1.12
EPHB4-207ENST00000489808 CUL5Q93034 780 aa22.05■■□□□ 1.12
EPHB4-207ENST00000489808 PRO3102Q9H379 93 aa22.05■■□□□ 1.12
EPHB4-207ENST00000489808 PSTPIP2Q9H939 334 aa22.05■■□□□ 1.12
EPHB4-207ENST00000489808 CEP290O15078 2479 aa22.05■■□□□ 1.12
EPHB4-207ENST00000489808 DNAH12Q6ZR08 3092 aa22.04■■□□□ 1.12
EPHB4-207ENST00000489808 EIF5BO60841 1220 aaKnown RBP22.04■■□□□ 1.12
EPHB4-207ENST00000489808 CABYRO75952 493 aa22.04■■□□□ 1.12
EPHB4-207ENST00000489808 MYCLP12524 364 aaPredicted RBP22.04■■□□□ 1.12
EPHB4-207ENST00000489808 CXCL17Q6UXB2 119 aa22.04■■□□□ 1.12
EPHB4-207ENST00000489808 OR6J1Q8NGC5 347 aa22.04■■□□□ 1.12
EPHB4-207ENST00000489808 SMARCC2Q8TAQ2 1214 aa22.04■■□□□ 1.12
EPHB4-207ENST00000489808 COPS5Q92905 334 aa22.04■■□□□ 1.12
EPHB4-207ENST00000489808 CNTNAP5Q8WYK1 1306 aa22.04■■□□□ 1.12
EPHB4-207ENST00000489808 CDK7P50613 346 aa22.03■■□□□ 1.12
EPHB4-207ENST00000489808 LY6KQ17RY6 165 aa22.03■■□□□ 1.12
EPHB4-207ENST00000489808 HABP4Q5JVS0 413 aaKnown RBP22.03■■□□□ 1.12
EPHB4-207ENST00000489808 HEATR3Q7Z4Q2 680 aa22.03■■□□□ 1.12
EPHB4-207ENST00000489808 GDF15Q99988 308 aa22.03■■□□□ 1.12
EPHB4-207ENST00000489808 DDX41Q9UJV9 622 aaKnown RBP22.03■■□□□ 1.12
EPHB4-207ENST00000489808 ARVCFO00192 962 aa22.02■■□□□ 1.12
EPHB4-207ENST00000489808 RGS20O76081 388 aa22.02■■□□□ 1.12
EPHB4-207ENST00000489808 PDIA3P30101 505 aaKnown RBP22.02■■□□□ 1.12
EPHB4-207ENST00000489808 CCND2P30279 289 aa22.02■■□□□ 1.12
EPHB4-207ENST00000489808 CPT1AP50416 773 aa22.02■■□□□ 1.12
EPHB4-207ENST00000489808 TOB2Q14106 344 aaPredicted RBP22.02■■□□□ 1.12
EPHB4-207ENST00000489808 WWC2Q6AWC2 1192 aa22.02■■□□□ 1.12
EPHB4-207ENST00000489808 ANKRD33Q7Z3H0 272 aa22.02■■□□□ 1.12
EPHB4-207ENST00000489808 IL31RAQ8NI17 732 aa22.02■■□□□ 1.12
EPHB4-207ENST00000489808 GPKOWQ92917 476 aaPredicted RBP eCLIP22.02■■□□□ 1.12
EPHB4-207ENST00000489808 TOX2Q96NM4 488 aa22.02■■□□□ 1.12
EPHB4-207ENST00000489808 UPF3BQ9BZI7 483 aaKnown RBP22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms