RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 GNEQ9Y223 722 aaKnown RBP20.01■□□□□ 0.79
MDC1-206ENST00000489540 NR2E3Q9Y5X4 410 aa20.01■□□□□ 0.79
MDC1-206ENST00000489540 CNTNAP5Q8WYK1 1306 aa20■□□□□ 0.79
MDC1-206ENST00000489540 SYNRGQ9UMZ2 1314 aa20■□□□□ 0.79
MDC1-206ENST00000489540 C11orf97A0A1B0GVM6 126 aaPredicted RBP20■□□□□ 0.79
MDC1-206ENST00000489540 hCG_1642624A0A1W2PR95 340 aa20■□□□□ 0.79
MDC1-206ENST00000489540 PIK3CDO00329 1044 aa20■□□□□ 0.79
MDC1-206ENST00000489540 EVI5O60447 810 aa20■□□□□ 0.79
MDC1-206ENST00000489540 NR3C2P08235 984 aa20■□□□□ 0.79
MDC1-206ENST00000489540 SMPD1P17405 629 aa20■□□□□ 0.79
MDC1-206ENST00000489540 EIF2AK2P19525 551 aaKnown RBP20■□□□□ 0.79
MDC1-206ENST00000489540 CST5P28325 142 aaPredicted RBP20■□□□□ 0.79
MDC1-206ENST00000489540 NKX3-2P78367 333 aa20■□□□□ 0.79
MDC1-206ENST00000489540 ZNF274Q96GC6 653 aaPredicted RBP20■□□□□ 0.79
MDC1-206ENST00000489540 AP5M1Q9H0R1 490 aa20■□□□□ 0.79
MDC1-206ENST00000489540 ALDH8A1Q9H2A2 487 aaPredicted RBP20■□□□□ 0.79
MDC1-206ENST00000489540 PSTPIP2Q9H939 334 aa20■□□□□ 0.79
MDC1-206ENST00000489540 PHF24Q9UPV7 400 aa20■□□□□ 0.79
MDC1-206ENST00000489540 NID2Q14112 1375 aa19.99■□□□□ 0.79
MDC1-206ENST00000489540 hCG_1984214I3L0E3 225 aa19.99■□□□□ 0.79
MDC1-206ENST00000489540 ADCY6O43306 1168 aa19.99■□□□□ 0.79
MDC1-206ENST00000489540 EIF3JO75822 258 aaKnown RBP19.99■□□□□ 0.79
MDC1-206ENST00000489540 C6orf222P0C671 652 aaPredicted RBP19.99■□□□□ 0.79
MDC1-206ENST00000489540 C8orf34Q49A92 452 aa19.99■□□□□ 0.79
MDC1-206ENST00000489540 DUSP28Q4G0W2 176 aa19.99■□□□□ 0.79
MDC1-206ENST00000489540 HEATR3Q7Z4Q2 680 aa19.99■□□□□ 0.79
MDC1-206ENST00000489540 FCHSD1Q86WN1 690 aa19.99■□□□□ 0.79
MDC1-206ENST00000489540 ZNF713Q8N859 430 aaPredicted RBP19.99■□□□□ 0.79
MDC1-206ENST00000489540 PCSK9Q8NBP7 692 aaKnown RBP19.99■□□□□ 0.79
MDC1-206ENST00000489540 SCFD2Q8WU76 684 aa19.99■□□□□ 0.79
MDC1-206ENST00000489540 RBM27Q9P2N5 1060 aaKnown RBP19.99■□□□□ 0.79
MDC1-206ENST00000489540 MOXD2PA6NHM9 499 aa19.98■□□□□ 0.79
MDC1-206ENST00000489540 NKRFO15226 690 aaKnown RBP eCLIP19.98■□□□□ 0.79
MDC1-206ENST00000489540 DYNC1LI2O43237 492 aaPredicted RBP19.98■□□□□ 0.79
MDC1-206ENST00000489540 GNASQ5JWF2 1037 aa19.98■□□□□ 0.79
MDC1-206ENST00000489540 PRPF38BQ5VTL8 546 aaKnown RBP19.98■□□□□ 0.79
MDC1-206ENST00000489540 TEX2Q8IWB9 1127 aa19.98■□□□□ 0.79
MDC1-206ENST00000489540 SMARCC2Q8TAQ2 1214 aa19.98■□□□□ 0.79
MDC1-206ENST00000489540 PDCD2LQ9BRP1 358 aa19.98■□□□□ 0.79
MDC1-206ENST00000489540 BAZ2BQ9UIF8 2168 aaKnown RBP19.98■□□□□ 0.79
MDC1-206ENST00000489540 TTLL4Q14679 1199 aa19.97■□□□□ 0.79
MDC1-206ENST00000489540 ANKRD1Q15327 319 aa19.97■□□□□ 0.79
MDC1-206ENST00000489540 KCNA10Q16322 511 aa19.97■□□□□ 0.79
MDC1-206ENST00000489540 CCSAPQ6IQ19 270 aaPredicted RBP19.97■□□□□ 0.79
MDC1-206ENST00000489540 TLK2Q86UE8 772 aa19.97■□□□□ 0.79
MDC1-206ENST00000489540 VSIG10LQ86VR7 867 aa19.97■□□□□ 0.79
MDC1-206ENST00000489540 MEIS2O14770 477 aa19.96■□□□□ 0.79
MDC1-206ENST00000489540 PRPF3O43395 683 aaKnown RBP19.96■□□□□ 0.79
MDC1-206ENST00000489540 ZEB2O60315 1214 aa19.96■□□□□ 0.79
MDC1-206ENST00000489540 ACLYP53396 1101 aa19.96■□□□□ 0.79
MDC1-206ENST00000489540 CCT2P78371 535 aaKnown RBP19.96■□□□□ 0.79
MDC1-206ENST00000489540 AKAP17AQ02040 695 aaKnown RBP19.96■□□□□ 0.79
MDC1-206ENST00000489540 PGM5Q15124 567 aa19.96■□□□□ 0.79
MDC1-206ENST00000489540 WWC2Q6AWC2 1192 aa19.96■□□□□ 0.79
MDC1-206ENST00000489540 PPP1R18Q6NYC8 613 aa19.96■□□□□ 0.79
MDC1-206ENST00000489540 USP17L6PQ6QN14 398 aa19.96■□□□□ 0.79
MDC1-206ENST00000489540 SLC39A5Q6ZMH5 540 aa19.96■□□□□ 0.79
MDC1-206ENST00000489540 GPKOWQ92917 476 aaPredicted RBP eCLIP19.96■□□□□ 0.79
MDC1-206ENST00000489540 FERMT2Q96AC1 680 aa19.96■□□□□ 0.79
MDC1-206ENST00000489540 MYADML2A6NDP7 307 aa19.95■□□□□ 0.78
MDC1-206ENST00000489540 TXNP10599 105 aaKnown RBP19.95■□□□□ 0.78
MDC1-206ENST00000489540 MYCLP12524 364 aaPredicted RBP19.95■□□□□ 0.78
MDC1-206ENST00000489540 IFNAR1P17181 557 aa19.95■□□□□ 0.78
MDC1-206ENST00000489540 CCND2P30279 289 aa19.95■□□□□ 0.78
MDC1-206ENST00000489540 NAPAP54920 295 aa19.95■□□□□ 0.78
MDC1-206ENST00000489540 PFKFB3Q16875 520 aaPredicted RBP19.95■□□□□ 0.78
MDC1-206ENST00000489540 LRRC26Q2I0M4 334 aa19.95■□□□□ 0.78
MDC1-206ENST00000489540 SEPT14Q6ZU15 432 aa19.95■□□□□ 0.78
MDC1-206ENST00000489540 GLT8D2Q9H1C3 349 aa19.95■□□□□ 0.78
MDC1-206ENST00000489540 BARHL2Q9NY43 387 aa19.95■□□□□ 0.78
MDC1-206ENST00000489540 MKI67P46013 3256 aaKnown RBP19.95■□□□□ 0.78
MDC1-206ENST00000489540 PDE4DIPQ5VU43 2346 aa19.95■□□□□ 0.78
MDC1-206ENST00000489540 CTAGE5O15320 804 aa19.94■□□□□ 0.78
MDC1-206ENST00000489540 ATN1P54259 1190 aaPredicted RBP19.94■□□□□ 0.78
MDC1-206ENST00000489540 NTRK3Q16288 839 aa19.94■□□□□ 0.78
MDC1-206ENST00000489540 FSCN1Q16658 493 aaKnown RBP19.94■□□□□ 0.78
MDC1-206ENST00000489540 TMEM63BQ5T3F8 832 aa19.94■□□□□ 0.78
MDC1-206ENST00000489540 C1orf53Q5VUE5 145 aa19.94■□□□□ 0.78
MDC1-206ENST00000489540 XRRA1Q6P2D8 792 aa19.94■□□□□ 0.78
MDC1-206ENST00000489540 LARP6Q9BRS8 491 aaKnown RBP19.94■□□□□ 0.78
MDC1-206ENST00000489540 RNF26Q9BY78 433 aaPredicted RBP19.94■□□□□ 0.78
MDC1-206ENST00000489540 A0A1W2PQ45 241 aaPredicted RBP19.93■□□□□ 0.78
MDC1-206ENST00000489540 A0A1W2PQY0 241 aa19.93■□□□□ 0.78
MDC1-206ENST00000489540 H0YGN5 161 aa19.93■□□□□ 0.78
MDC1-206ENST00000489540 CPLX1O14810 134 aa19.93■□□□□ 0.78
MDC1-206ENST00000489540 STAM2O75886 525 aa19.93■□□□□ 0.78
MDC1-206ENST00000489540 ASGR1P07306 291 aa19.93■□□□□ 0.78
MDC1-206ENST00000489540 SCG2P13521 617 aa19.93■□□□□ 0.78
MDC1-206ENST00000489540 BRDTQ58F21 947 aaPredicted RBP19.93■□□□□ 0.78
MDC1-206ENST00000489540 CCDC62Q6P9F0 684 aa19.93■□□□□ 0.78
MDC1-206ENST00000489540 KCNV1Q6PIU1 500 aa19.93■□□□□ 0.78
MDC1-206ENST00000489540 CPLX2Q6PUV4 134 aaKnown RBP19.93■□□□□ 0.78
MDC1-206ENST00000489540 GLT1D1Q96MS3 346 aa19.93■□□□□ 0.78
MDC1-206ENST00000489540 NCOA5Q9HCD5 579 aaKnown RBP19.93■□□□□ 0.78
MDC1-206ENST00000489540 RIC8AQ9NPQ8 531 aa19.93■□□□□ 0.78
MDC1-206ENST00000489540 ELP1O95163 1332 aa19.93■□□□□ 0.78
MDC1-206ENST00000489540 FRMPD4Q14CM0 1322 aa19.93■□□□□ 0.78
MDC1-206ENST00000489540 STXBP3O00186 592 aa19.93■□□□□ 0.78
MDC1-206ENST00000489540 CABYRO75952 493 aa19.93■□□□□ 0.78
MDC1-206ENST00000489540 IRX5P78411 483 aaPredicted RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms