RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 RABGAP1Q9Y3P9 1069 aa23.7■■□□□ 1.38
SND1-214ENST00000489417 MYH7BA7E2Y1 1941 aa23.7■■□□□ 1.38
SND1-214ENST00000489417 CYP3A7-CYP3A51PA0A087WV96 503 aa23.69■■□□□ 1.38
SND1-214ENST00000489417 CYP3A4P08684 503 aa23.69■■□□□ 1.38
SND1-214ENST00000489417 CYP3A7P24462 503 aa23.69■■□□□ 1.38
SND1-214ENST00000489417 PRPHP41219 470 aa23.69■■□□□ 1.38
SND1-214ENST00000489417 RPS6P62753 249 aaKnown RBP23.69■■□□□ 1.38
SND1-214ENST00000489417 SLC30A10Q6XR72 485 aa23.69■■□□□ 1.38
SND1-214ENST00000489417 POTEDQ86YR6 584 aa23.69■■□□□ 1.38
SND1-214ENST00000489417 CSRNP2Q9H175 543 aa23.69■■□□□ 1.38
SND1-214ENST00000489417 COL20A1Q9P218 1284 aa23.69■■□□□ 1.38
SND1-214ENST00000489417 DDX25Q9UHL0 483 aaKnown RBP23.69■■□□□ 1.38
SND1-214ENST00000489417 A0A1B0GVL5 298 aa23.68■■□□□ 1.38
SND1-214ENST00000489417 VWA3AA6NCI4 1184 aa23.68■■□□□ 1.38
SND1-214ENST00000489417 SLC37A4O43826 429 aa23.68■■□□□ 1.38
SND1-214ENST00000489417 PEX10O60683 326 aa23.68■■□□□ 1.38
SND1-214ENST00000489417 FAM160A1Q05DH4 1040 aa23.68■■□□□ 1.38
SND1-214ENST00000489417 MBOAT7Q96N66 472 aa23.68■■□□□ 1.38
SND1-214ENST00000489417 GZF1Q9H116 711 aaPredicted RBP23.68■■□□□ 1.38
SND1-214ENST00000489417 DACT1Q9NYF0 836 aa23.68■■□□□ 1.38
SND1-214ENST00000489417 RBPJLQ9UBG7 517 aa23.68■■□□□ 1.38
SND1-214ENST00000489417 RPTORQ8N122 1335 aa23.68■■□□□ 1.38
SND1-214ENST00000489417 TESPA1A2RU30 521 aaPredicted RBP23.67■■□□□ 1.38
SND1-214ENST00000489417 NR1I2O75469 434 aa23.67■■□□□ 1.38
SND1-214ENST00000489417 SLC10A3P09131 477 aa23.67■■□□□ 1.38
SND1-214ENST00000489417 CYP2C8P10632 490 aa23.67■■□□□ 1.38
SND1-214ENST00000489417 PFKFB1P16118 471 aa23.67■■□□□ 1.38
SND1-214ENST00000489417 CIITAP33076 1130 aa23.67■■□□□ 1.38
SND1-214ENST00000489417 BAATQ14032 418 aaPredicted RBP23.67■■□□□ 1.38
SND1-214ENST00000489417 IL17AQ16552 155 aa23.67■■□□□ 1.38
SND1-214ENST00000489417 CALCRLQ16602 461 aa23.67■■□□□ 1.38
SND1-214ENST00000489417 DTHD1Q6ZMT9 781 aa23.67■■□□□ 1.38
SND1-214ENST00000489417 FAM43AQ8N2R8 423 aa23.67■■□□□ 1.38
SND1-214ENST00000489417 ENGASEQ8NFI3 743 aa23.67■■□□□ 1.38
SND1-214ENST00000489417 DDX19AQ9NUU7 478 aaKnown RBP23.67■■□□□ 1.38
SND1-214ENST00000489417 FBXO40Q9UH90 709 aa23.67■■□□□ 1.38
SND1-214ENST00000489417 FAM237AA0A1B0GTK4 181 aa23.67■■□□□ 1.38
SND1-214ENST00000489417 MANSC4A6NHS7 340 aaPredicted RBP23.67■■□□□ 1.38
SND1-214ENST00000489417 TMEM88BA6NKF7 163 aa23.67■■□□□ 1.38
SND1-214ENST00000489417 COPB2P35606 906 aa23.67■■□□□ 1.38
SND1-214ENST00000489417 NDUFA8P51970 172 aa23.67■■□□□ 1.38
SND1-214ENST00000489417 CCDC183Q5T5S1 534 aa23.67■■□□□ 1.38
SND1-214ENST00000489417 MTMR9Q96QG7 549 aa23.67■■□□□ 1.38
SND1-214ENST00000489417 MOV10L1Q9BXT6 1211 aaKnown RBP23.67■■□□□ 1.38
SND1-214ENST00000489417 TXNRD2Q9NNW7 524 aa23.67■■□□□ 1.38
SND1-214ENST00000489417 FAM13BQ9NYF5 915 aa23.67■■□□□ 1.38
SND1-214ENST00000489417 ABT1Q9ULW3 272 aaKnown RBP23.67■■□□□ 1.38
SND1-214ENST00000489417 FRMPD4Q14CM0 1322 aa23.66■■□□□ 1.38
SND1-214ENST00000489417 SLC25A27O95847 323 aa23.66■■□□□ 1.38
SND1-214ENST00000489417 LONP1P36776 959 aaKnown RBP23.66■■□□□ 1.38
SND1-214ENST00000489417 FSTL1Q12841 308 aa23.66■■□□□ 1.38
SND1-214ENST00000489417 SPECC1Q5M775 1068 aa23.66■■□□□ 1.38
SND1-214ENST00000489417 FMR1NBQ8N0W7 255 aaPredicted RBP23.66■■□□□ 1.38
SND1-214ENST00000489417 SMCR8Q8TEV9 937 aaPredicted RBP23.66■■□□□ 1.38
SND1-214ENST00000489417 TAAR1Q96RJ0 339 aa23.66■■□□□ 1.38
SND1-214ENST00000489417 PTPN18Q99952 460 aa23.66■■□□□ 1.38
SND1-214ENST00000489417 A1CFQ9NQ94 594 aaKnown RBP23.66■■□□□ 1.38
SND1-214ENST00000489417 HPSEQ9Y251 543 aa23.66■■□□□ 1.38
SND1-214ENST00000489417 YY1P25490 414 aa23.65■■□□□ 1.38
SND1-214ENST00000489417 ZNF76P36508 570 aa23.65■■□□□ 1.38
SND1-214ENST00000489417 UBXN2AP68543 259 aa23.65■■□□□ 1.38
SND1-214ENST00000489417 SNW1Q13573 536 aaKnown RBP23.65■■□□□ 1.38
SND1-214ENST00000489417 Q4G0T1 1027 aa23.65■■□□□ 1.38
SND1-214ENST00000489417 NCAPG2Q86XI2 1143 aa23.65■■□□□ 1.38
SND1-214ENST00000489417 PARK7Q99497 189 aaKnown RBP23.65■■□□□ 1.38
SND1-214ENST00000489417 CYP39A1Q9NYL5 469 aa23.65■■□□□ 1.38
SND1-214ENST00000489417 CCDC102AQ96A19 550 aa23.64■■□□□ 1.37
SND1-214ENST00000489417 HHIPL1Q96JK4 782 aa23.64■■□□□ 1.37
SND1-214ENST00000489417 KINO60870 393 aaKnown RBP23.63■■□□□ 1.37
SND1-214ENST00000489417 SYKP43405 635 aa23.63■■□□□ 1.37
SND1-214ENST00000489417 GCLCP48506 637 aaPredicted RBP23.63■■□□□ 1.37
SND1-214ENST00000489417 ERVK-9P63128 1117 aa23.63■■□□□ 1.37
SND1-214ENST00000489417 ERVK-24P63145 666 aa23.63■■□□□ 1.37
SND1-214ENST00000489417 ZSCAN23Q3MJ62 389 aa23.63■■□□□ 1.37
SND1-214ENST00000489417 PRR16Q569H4 304 aa23.63■■□□□ 1.37
SND1-214ENST00000489417 SYMPKQ92797 1274 aaKnown RBP23.63■■□□□ 1.37
SND1-214ENST00000489417 NUP62CLQ9H1M0 184 aa23.63■■□□□ 1.37
SND1-214ENST00000489417 CLSTN2Q9H4D0 955 aa23.63■■□□□ 1.37
SND1-214ENST00000489417 KCNH3Q9ULD8 1083 aa23.63■■□□□ 1.37
SND1-214ENST00000489417 PFASO15067 1338 aa23.63■■□□□ 1.37
SND1-214ENST00000489417 FAM86B1E9PN63 330 aa23.62■■□□□ 1.37
SND1-214ENST00000489417 MARCH6O60337 910 aa23.62■■□□□ 1.37
SND1-214ENST00000489417 FAM86B2P0C5J1 330 aa23.62■■□□□ 1.37
SND1-214ENST00000489417 ERCC3P19447 782 aa23.62■■□□□ 1.37
SND1-214ENST00000489417 TXKP42681 527 aa23.62■■□□□ 1.37
SND1-214ENST00000489417 TMEM266Q2M3C6 531 aa23.62■■□□□ 1.37
SND1-214ENST00000489417 Q3C1V9 767 aa23.62■■□□□ 1.37
SND1-214ENST00000489417 USP49Q70CQ1 688 aa23.62■■□□□ 1.37
SND1-214ENST00000489417 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.62■■□□□ 1.37
SND1-214ENST00000489417 LENG9Q96B70 501 aa23.62■■□□□ 1.37
SND1-214ENST00000489417 RMDN3Q96TC7 470 aa23.62■■□□□ 1.37
SND1-214ENST00000489417 ZCCHC17Q9NP64 241 aaKnown RBP23.62■■□□□ 1.37
SND1-214ENST00000489417 KCNMB3Q9NPA1 279 aa23.62■■□□□ 1.37
SND1-214ENST00000489417 PXMP2Q9NR77 195 aa23.62■■□□□ 1.37
SND1-214ENST00000489417 FAM155AB1AL88 458 aaPredicted RBP23.61■■□□□ 1.37
SND1-214ENST00000489417 TBX3O15119 743 aa23.61■■□□□ 1.37
SND1-214ENST00000489417 EIF2AK2P19525 551 aaKnown RBP23.61■■□□□ 1.37
SND1-214ENST00000489417 ARHGEF16Q5VV41 709 aa23.61■■□□□ 1.37
SND1-214ENST00000489417 PCNX4Q63HM2 1172 aa23.61■■□□□ 1.37
SND1-214ENST00000489417 ANKRD35Q8N283 1001 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms