RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 FBN2P35556 2912 aa9.39□□□□□ -0.91
EXOSC3-206ENST00000489414 SCN10AQ9Y5Y9 1956 aa9.39□□□□□ -0.91
EXOSC3-206ENST00000489414 CHL1O00533 1208 aa9.39□□□□□ -0.91
EXOSC3-206ENST00000489414 ZEB2O60315 1214 aa9.39□□□□□ -0.91
EXOSC3-206ENST00000489414 NBNO60934 754 aa9.39□□□□□ -0.91
EXOSC3-206ENST00000489414 CSPG5O95196 566 aa9.39□□□□□ -0.91
EXOSC3-206ENST00000489414 SLC25A27O95847 323 aa9.39□□□□□ -0.91
EXOSC3-206ENST00000489414 NEFMP07197 916 aa9.39□□□□□ -0.91
EXOSC3-206ENST00000489414 SPINK2P20155 84 aa9.39□□□□□ -0.91
EXOSC3-206ENST00000489414 CTNNB1P35222 781 aa9.39□□□□□ -0.91
EXOSC3-206ENST00000489414 NEXNQ0ZGT2 675 aa9.39□□□□□ -0.91
EXOSC3-206ENST00000489414 IKBKEQ14164 716 aa9.39□□□□□ -0.91
EXOSC3-206ENST00000489414 IL31Q6EBC2 164 aa9.39□□□□□ -0.91
EXOSC3-206ENST00000489414 TLK2Q86UE8 772 aa9.39□□□□□ -0.91
EXOSC3-206ENST00000489414 AFAP1L1Q8TED9 768 aa9.39□□□□□ -0.91
EXOSC3-206ENST00000489414 YME1L1Q96TA2 773 aa9.39□□□□□ -0.91
EXOSC3-206ENST00000489414 S1PR5Q9H228 398 aa9.39□□□□□ -0.91
EXOSC3-206ENST00000489414 TSHZ2Q9NRE2 1034 aa9.39□□□□□ -0.91
EXOSC3-206ENST00000489414 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.39□□□□□ -0.91
EXOSC3-206ENST00000489414 SRPK3Q9UPE1 567 aa9.39□□□□□ -0.91
EXOSC3-206ENST00000489414 GNEQ9Y223 722 aaKnown RBP9.39□□□□□ -0.91
EXOSC3-206ENST00000489414 CHMP3Q9Y3E7 222 aa9.39□□□□□ -0.91
EXOSC3-206ENST00000489414 PARP14Q460N5 1801 aa9.38□□□□□ -0.91
EXOSC3-206ENST00000489414 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.38□□□□□ -0.91
EXOSC3-206ENST00000489414 LILRB5O75023 590 aa9.38□□□□□ -0.91
EXOSC3-206ENST00000489414 LRP3O75074 770 aa9.38□□□□□ -0.91
EXOSC3-206ENST00000489414 BTDP43251 543 aa9.38□□□□□ -0.91
EXOSC3-206ENST00000489414 NRIP1P48552 1158 aa9.38□□□□□ -0.91
EXOSC3-206ENST00000489414 TAF7LQ5H9L4 462 aa9.38□□□□□ -0.91
EXOSC3-206ENST00000489414 KSR2Q6VAB6 950 aa9.38□□□□□ -0.91
EXOSC3-206ENST00000489414 PRR23CQ6ZRP0 262 aa9.38□□□□□ -0.91
EXOSC3-206ENST00000489414 MYOCDQ8IZQ8 938 aa9.38□□□□□ -0.91
EXOSC3-206ENST00000489414 MAGEB6Q8N7X4 407 aa9.38□□□□□ -0.91
EXOSC3-206ENST00000489414 ZBTB44Q8NCP5 570 aa9.38□□□□□ -0.91
EXOSC3-206ENST00000489414 ATP8B4Q8TF62 1192 aa9.38□□□□□ -0.91
EXOSC3-206ENST00000489414 KATNBL1Q9H079 304 aa9.38□□□□□ -0.91
EXOSC3-206ENST00000489414 KCNK4Q9NYG8 393 aa9.38□□□□□ -0.91
EXOSC3-206ENST00000489414 PI4KAP2A4QPH2 592 aa9.37□□□□□ -0.91
EXOSC3-206ENST00000489414 PER1O15534 1290 aaPredicted RBP9.37□□□□□ -0.91
EXOSC3-206ENST00000489414 TBC1D4O60343 1298 aa9.37□□□□□ -0.91
EXOSC3-206ENST00000489414 KCNK5O95279 499 aa9.37□□□□□ -0.91
EXOSC3-206ENST00000489414 PARNO95453 639 aaKnown RBP9.37□□□□□ -0.91
EXOSC3-206ENST00000489414 AMHP03971 560 aa9.37□□□□□ -0.91
EXOSC3-206ENST00000489414 BMPR1AP36894 532 aa9.37□□□□□ -0.91
EXOSC3-206ENST00000489414 RBM10P98175 930 aaKnown RBP9.37□□□□□ -0.91
EXOSC3-206ENST00000489414 CCDC57Q2TAC2 916 aa9.37□□□□□ -0.91
EXOSC3-206ENST00000489414 DUSP27Q5VZP5 1158 aa9.37□□□□□ -0.91
EXOSC3-206ENST00000489414 ZNF467Q7Z7K2 595 aaPredicted RBP9.37□□□□□ -0.91
EXOSC3-206ENST00000489414 ZNF605Q86T29 641 aa9.37□□□□□ -0.91
EXOSC3-206ENST00000489414 METTL16Q86W50 562 aaKnown RBP9.37□□□□□ -0.91
EXOSC3-206ENST00000489414 PI4KAP1Q8N8J0 262 aa9.37□□□□□ -0.91
EXOSC3-206ENST00000489414 VN1R2Q8NFZ6 395 aa9.37□□□□□ -0.91
EXOSC3-206ENST00000489414 ATRIPQ8WXE1 791 aa9.37□□□□□ -0.91
EXOSC3-206ENST00000489414 PUS3Q9BZE2 481 aaKnown RBP9.37□□□□□ -0.91
EXOSC3-206ENST00000489414 PI4KBQ9UBF8 816 aa9.37□□□□□ -0.91
EXOSC3-206ENST00000489414 RALGAPA1Q6GYQ0 2036 aa9.37□□□□□ -0.91
EXOSC3-206ENST00000489414 NBPF19A0A087WUL8 3843 aa9.36□□□□□ -0.91
EXOSC3-206ENST00000489414 PATJQ8NI35 1801 aa9.36□□□□□ -0.91
EXOSC3-206ENST00000489414 J3QKU1 62 aa9.36□□□□□ -0.91
EXOSC3-206ENST00000489414 LGR5O75473 907 aa9.36□□□□□ -0.91
EXOSC3-206ENST00000489414 CENPBP07199 599 aaPredicted RBP9.36□□□□□ -0.91
EXOSC3-206ENST00000489414 DCNP07585 359 aaKnown RBP9.36□□□□□ -0.91
EXOSC3-206ENST00000489414 PTGS1P23219 599 aa9.36□□□□□ -0.91
EXOSC3-206ENST00000489414 LIMK1P53667 647 aa9.36□□□□□ -0.91
EXOSC3-206ENST00000489414 SPECC1Q5M775 1068 aa9.36□□□□□ -0.91
EXOSC3-206ENST00000489414 LRRC8DQ7L1W4 858 aa9.36□□□□□ -0.91
EXOSC3-206ENST00000489414 PROSER1Q86XN7 944 aa9.36□□□□□ -0.91
EXOSC3-206ENST00000489414 CAGE1Q8TC20 777 aa9.36□□□□□ -0.91
EXOSC3-206ENST00000489414 SEMA4GQ9NTN9 838 aa9.36□□□□□ -0.91
EXOSC3-206ENST00000489414 FBXL21Q9UKT6 434 aa9.36□□□□□ -0.91
EXOSC3-206ENST00000489414 FBN3Q75N90 2809 aa9.36□□□□□ -0.91
EXOSC3-206ENST00000489414 NOTCH2Q04721 2471 aa9.36□□□□□ -0.91
EXOSC3-206ENST00000489414 DNAJC25-GNG10A0A024R161 153 aa9.35□□□□□ -0.91
EXOSC3-206ENST00000489414 RBAK-RBAKDNI3L0D1 243 aa9.35□□□□□ -0.91
EXOSC3-206ENST00000489414 SELPP16109 830 aa9.35□□□□□ -0.91
EXOSC3-206ENST00000489414 DNAJB1P25685 340 aa9.35□□□□□ -0.91
EXOSC3-206ENST00000489414 TNFAIP2Q03169 654 aa9.35□□□□□ -0.91
EXOSC3-206ENST00000489414 FOXC1Q12948 553 aa9.35□□□□□ -0.91
EXOSC3-206ENST00000489414 TMEM132BQ14DG7 1078 aa9.35□□□□□ -0.91
EXOSC3-206ENST00000489414 RBM23Q86U06 439 aaKnown RBP9.35□□□□□ -0.91
EXOSC3-206ENST00000489414 RIOX2Q8IUF8 465 aa9.35□□□□□ -0.91
EXOSC3-206ENST00000489414 ZDHHC14Q8IZN3 488 aa9.35□□□□□ -0.91
EXOSC3-206ENST00000489414 PDCD7Q8N8D1 485 aaKnown RBP9.35□□□□□ -0.91
EXOSC3-206ENST00000489414 VGLL2Q8N8G2 317 aa9.35□□□□□ -0.91
EXOSC3-206ENST00000489414 ACER1Q8TDN7 264 aa9.35□□□□□ -0.91
EXOSC3-206ENST00000489414 NEK1Q96PY6 1258 aa9.35□□□□□ -0.91
EXOSC3-206ENST00000489414 CLMPQ9H6B4 373 aa9.35□□□□□ -0.91
EXOSC3-206ENST00000489414 LIMD1Q9UGP4 676 aa9.35□□□□□ -0.91
EXOSC3-206ENST00000489414 FBXO4Q9UKT5 387 aa9.35□□□□□ -0.91
EXOSC3-206ENST00000489414 DUSP12Q9UNI6 340 aa9.35□□□□□ -0.91
EXOSC3-206ENST00000489414 RWDD3Q9Y3V2 267 aa9.35□□□□□ -0.91
EXOSC3-206ENST00000489414 GPR75-ASB3A0A0A6YYF3 556 aa9.34□□□□□ -0.91
EXOSC3-206ENST00000489414 KRBA1A5PL33 1030 aa9.34□□□□□ -0.91
EXOSC3-206ENST00000489414 STK25O00506 426 aa9.34□□□□□ -0.91
EXOSC3-206ENST00000489414 TOP3BO95985 862 aaKnown RBP9.34□□□□□ -0.91
EXOSC3-206ENST00000489414 GH2P01242 217 aa9.34□□□□□ -0.91
EXOSC3-206ENST00000489414 MCAMP43121 646 aa9.34□□□□□ -0.91
EXOSC3-206ENST00000489414 RIPPLY3P57055 190 aa9.34□□□□□ -0.91
EXOSC3-206ENST00000489414 CSRP2Q16527 193 aa9.34□□□□□ -0.91
EXOSC3-206ENST00000489414 LMBR1LQ6UX01 489 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms