RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 GTF3C2Q8WUA4 911 aaPredicted RBP11.34□□□□□ -0.59
USP11-211ENST00000489111 TBC1D5Q92609 795 aa11.34□□□□□ -0.59
USP11-211ENST00000489111 SYMPKQ92797 1274 aaKnown RBP11.34□□□□□ -0.59
USP11-211ENST00000489111 CCDC34Q96HJ3 373 aa11.34□□□□□ -0.59
USP11-211ENST00000489111 P2RX7Q99572 595 aaKnown RBP11.34□□□□□ -0.59
USP11-211ENST00000489111 SDF4Q9BRK5 362 aa11.34□□□□□ -0.59
USP11-211ENST00000489111 PYM1Q9BRP8 204 aaKnown RBP11.34□□□□□ -0.59
USP11-211ENST00000489111 PAGR1Q9BTK6 254 aa11.34□□□□□ -0.59
USP11-211ENST00000489111 RAB34Q9BZG1 259 aa11.34□□□□□ -0.59
USP11-211ENST00000489111 FBXO40Q9UH90 709 aa11.34□□□□□ -0.59
USP11-211ENST00000489111 HOOK1Q9UJC3 728 aaKnown RBP11.34□□□□□ -0.59
USP11-211ENST00000489111 HPSEQ9Y251 543 aa11.34□□□□□ -0.59
USP11-211ENST00000489111 MYH15Q9Y2K3 1946 aa11.34□□□□□ -0.59
USP11-211ENST00000489111 CYP3A7-CYP3A51PA0A087WV96 503 aa11.33□□□□□ -0.6
USP11-211ENST00000489111 ZNF202O95125 648 aa11.33□□□□□ -0.6
USP11-211ENST00000489111 CYP3A4P08684 503 aa11.33□□□□□ -0.6
USP11-211ENST00000489111 CYP3A7P24462 503 aa11.33□□□□□ -0.6
USP11-211ENST00000489111 TXKP42681 527 aa11.33□□□□□ -0.6
USP11-211ENST00000489111 PRR16Q569H4 304 aa11.33□□□□□ -0.6
USP11-211ENST00000489111 CST9Q5W186 159 aa11.33□□□□□ -0.6
USP11-211ENST00000489111 GPAT2Q6NUI2 795 aa11.33□□□□□ -0.6
USP11-211ENST00000489111 SLC30A10Q6XR72 485 aa11.33□□□□□ -0.6
USP11-211ENST00000489111 RIOX2Q8IUF8 465 aa11.33□□□□□ -0.6
USP11-211ENST00000489111 CHST13Q8NET6 341 aa11.33□□□□□ -0.6
USP11-211ENST00000489111 SYTL5Q8TDW5 730 aaPredicted RBP11.33□□□□□ -0.6
USP11-211ENST00000489111 SMCR8Q8TEV9 937 aaPredicted RBP11.33□□□□□ -0.6
USP11-211ENST00000489111 CRYGNQ8WXF5 182 aa11.33□□□□□ -0.6
USP11-211ENST00000489111 AK8Q96MA6 479 aa11.33□□□□□ -0.6
USP11-211ENST00000489111 MAF1Q9H063 256 aa11.33□□□□□ -0.6
USP11-211ENST00000489111 SPATC1LQ9H0A9 340 aa11.33□□□□□ -0.6
USP11-211ENST00000489111 SLC45A1Q9Y2W3 748 aa11.33□□□□□ -0.6
USP11-211ENST00000489111 RIPK3Q9Y572 518 aa11.33□□□□□ -0.6
USP11-211ENST00000489111 PHIPQ8WWQ0 1821 aa11.32□□□□□ -0.6
USP11-211ENST00000489111 LOC285556D6RIA3 1793 aa11.32□□□□□ -0.6
USP11-211ENST00000489111 PDHXO00330 501 aa11.32□□□□□ -0.6
USP11-211ENST00000489111 CIITAP33076 1130 aa11.32□□□□□ -0.6
USP11-211ENST00000489111 UBA7P41226 1012 aa11.32□□□□□ -0.6
USP11-211ENST00000489111 ZNF157P51786 506 aaPredicted RBP11.32□□□□□ -0.6
USP11-211ENST00000489111 RPS6P62753 249 aaKnown RBP11.32□□□□□ -0.6
USP11-211ENST00000489111 UBXN2AP68543 259 aa11.32□□□□□ -0.6
USP11-211ENST00000489111 SETQ01105 290 aaPredicted RBP11.32□□□□□ -0.6
USP11-211ENST00000489111 ZRSR1Q15695 479 aaKnown RBP11.32□□□□□ -0.6
USP11-211ENST00000489111 IL17AQ16552 155 aa11.32□□□□□ -0.6
USP11-211ENST00000489111 Q4G0T1 1027 aa11.32□□□□□ -0.6
USP11-211ENST00000489111 LRSAM1Q6UWE0 723 aa11.32□□□□□ -0.6
USP11-211ENST00000489111 ANKRD23Q86SG2 305 aa11.32□□□□□ -0.6
USP11-211ENST00000489111 CKAP2LQ8IYA6 745 aa11.32□□□□□ -0.6
USP11-211ENST00000489111 SLFN12Q8IYM2 578 aa11.32□□□□□ -0.6
USP11-211ENST00000489111 CNNM3Q8NE01 707 aa11.32□□□□□ -0.6
USP11-211ENST00000489111 BRI3BPQ8WY22 251 aa11.32□□□□□ -0.6
USP11-211ENST00000489111 EPSTI1Q96J88 318 aa11.32□□□□□ -0.6
USP11-211ENST00000489111 TIGD1Q96MW7 591 aa11.32□□□□□ -0.6
USP11-211ENST00000489111 MBOAT7Q96N66 472 aa11.32□□□□□ -0.6
USP11-211ENST00000489111 MTMR9Q96QG7 549 aa11.32□□□□□ -0.6
USP11-211ENST00000489111 BTBD7Q9P203 1132 aa11.32□□□□□ -0.6
USP11-211ENST00000489111 PFASO15067 1338 aa11.32□□□□□ -0.6
USP11-211ENST00000489111 RPTORQ8N122 1335 aa11.32□□□□□ -0.6
USP11-211ENST00000489111 GOLGA6L3A6NEY3 463 aa11.31□□□□□ -0.6
USP11-211ENST00000489111 BTBD19C9JJ37 291 aa11.31□□□□□ -0.6
USP11-211ENST00000489111 TBX3O15119 743 aa11.31□□□□□ -0.6
USP11-211ENST00000489111 POLR2DO15514 142 aaKnown RBP11.31□□□□□ -0.6
USP11-211ENST00000489111 EDIL3O43854 480 aa11.31□□□□□ -0.6
USP11-211ENST00000489111 SLC25A27O95847 323 aa11.31□□□□□ -0.6
USP11-211ENST00000489111 CCDC192P0DO97 292 aa11.31□□□□□ -0.6
USP11-211ENST00000489111 EIF2AK2P19525 551 aaKnown RBP11.31□□□□□ -0.6
USP11-211ENST00000489111 TECP42680 631 aa11.31□□□□□ -0.6
USP11-211ENST00000489111 FXR2P51116 673 aaKnown RBP eCLIP11.31□□□□□ -0.6
USP11-211ENST00000489111 BAATQ14032 418 aaPredicted RBP11.31□□□□□ -0.6
USP11-211ENST00000489111 ARHGEF16Q5VV41 709 aa11.31□□□□□ -0.6
USP11-211ENST00000489111 KANK3Q6NY19 840 aa11.31□□□□□ -0.6
USP11-211ENST00000489111 KRBA2Q6ZNG9 492 aa11.31□□□□□ -0.6
USP11-211ENST00000489111 USP49Q70CQ1 688 aa11.31□□□□□ -0.6
USP11-211ENST00000489111 NCAPG2Q86XI2 1143 aa11.31□□□□□ -0.6
USP11-211ENST00000489111 RASAL3Q86YV0 1011 aa11.31□□□□□ -0.6
USP11-211ENST00000489111 CEP57L1Q8IYX8 460 aa11.31□□□□□ -0.6
USP11-211ENST00000489111 ANKRD35Q8N283 1001 aa11.31□□□□□ -0.6
USP11-211ENST00000489111 PDILTQ8N807 584 aa11.31□□□□□ -0.6
USP11-211ENST00000489111 DHX58Q96C10 678 aa11.31□□□□□ -0.6
USP11-211ENST00000489111 MS4A4AQ96JQ5 239 aa11.31□□□□□ -0.6
USP11-211ENST00000489111 RMDN3Q96TC7 470 aa11.31□□□□□ -0.6
USP11-211ENST00000489111 PARK7Q99497 189 aaKnown RBP11.31□□□□□ -0.6
USP11-211ENST00000489111 TSPY26PQ9H489 355 aa11.31□□□□□ -0.6
USP11-211ENST00000489111 KCNMB3Q9NPA1 279 aa11.31□□□□□ -0.6
USP11-211ENST00000489111 COL20A1Q9P218 1284 aa11.31□□□□□ -0.6
USP11-211ENST00000489111 LRWD1Q9UFC0 647 aa11.31□□□□□ -0.6
USP11-211ENST00000489111 CCDC39Q9UFE4 941 aa11.31□□□□□ -0.6
USP11-211ENST00000489111 USP25Q9UHP3 1055 aa11.31□□□□□ -0.6
USP11-211ENST00000489111 PASKQ96RG2 1323 aa11.31□□□□□ -0.6
USP11-211ENST00000489111 FAM86B1E9PN63 330 aa11.3□□□□□ -0.6
USP11-211ENST00000489111 KIF3CO14782 793 aa11.3□□□□□ -0.6
USP11-211ENST00000489111 FAM86B2P0C5J1 330 aa11.3□□□□□ -0.6
USP11-211ENST00000489111 CYP2C8P10632 490 aa11.3□□□□□ -0.6
USP11-211ENST00000489111 CCND2P30279 289 aa11.3□□□□□ -0.6
USP11-211ENST00000489111 CCNA1P78396 465 aa11.3□□□□□ -0.6
USP11-211ENST00000489111 CEP55Q53EZ4 464 aa11.3□□□□□ -0.6
USP11-211ENST00000489111 PCNX4Q63HM2 1172 aa11.3□□□□□ -0.6
USP11-211ENST00000489111 RGMBQ6NW40 437 aa11.3□□□□□ -0.6
USP11-211ENST00000489111 XRRA1Q6P2D8 792 aa11.3□□□□□ -0.6
USP11-211ENST00000489111 SASS6Q6UVJ0 657 aa11.3□□□□□ -0.6
USP11-211ENST00000489111 SAPCD2Q86UD0 394 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms