RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 HIBADHP31937 336 aaKnown RBP6.31□□□□□ -1.4
SF3A3-207ENST00000488934 IL15P40933 162 aaPredicted RBP6.31□□□□□ -1.4
SF3A3-207ENST00000488934 GRIA4P48058 902 aa6.31□□□□□ -1.4
SF3A3-207ENST00000488934 PLCB3Q01970 1234 aa6.31□□□□□ -1.4
SF3A3-207ENST00000488934 MTX1Q13505 466 aa6.31□□□□□ -1.4
SF3A3-207ENST00000488934 DACT2Q5SW24 774 aa6.31□□□□□ -1.4
SF3A3-207ENST00000488934 MAP1SQ66K74 1059 aaPredicted RBP6.31□□□□□ -1.4
SF3A3-207ENST00000488934 TTLL5Q6EMB2 1281 aa6.31□□□□□ -1.4
SF3A3-207ENST00000488934 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.31□□□□□ -1.4
SF3A3-207ENST00000488934 TMC7Q7Z402 723 aa6.31□□□□□ -1.4
SF3A3-207ENST00000488934 Q8N3U1 123 aa6.31□□□□□ -1.4
SF3A3-207ENST00000488934 TBC1D22AQ8WUA7 517 aa6.31□□□□□ -1.4
SF3A3-207ENST00000488934 DCPSQ96C86 337 aaKnown RBP6.31□□□□□ -1.4
SF3A3-207ENST00000488934 MEIS3Q99687 375 aa6.31□□□□□ -1.4
SF3A3-207ENST00000488934 CD209Q9NNX6 404 aa6.31□□□□□ -1.4
SF3A3-207ENST00000488934 MYOZ2Q9NPC6 264 aa6.31□□□□□ -1.4
SF3A3-207ENST00000488934 PGAP2Q9UHJ9 254 aa6.31□□□□□ -1.4
SF3A3-207ENST00000488934 RCAN3Q9UKA8 241 aa6.31□□□□□ -1.4
SF3A3-207ENST00000488934 RIPOR2Q9Y4F9 1068 aa6.31□□□□□ -1.4
SF3A3-207ENST00000488934 LRRFIP2Q9Y608 721 aaKnown RBP6.31□□□□□ -1.4
SF3A3-207ENST00000488934 MAST3O60307 1309 aa6.3□□□□□ -1.4
SF3A3-207ENST00000488934 IRS2Q9Y4H2 1338 aa6.3□□□□□ -1.4
SF3A3-207ENST00000488934 COL1A1P02452 1464 aaPredicted RBP6.3□□□□□ -1.4
SF3A3-207ENST00000488934 LOC100289279A0A1B0GTE1 492 aa6.3□□□□□ -1.4
SF3A3-207ENST00000488934 MYO1BO43795 1136 aa6.3□□□□□ -1.4
SF3A3-207ENST00000488934 SASH1O94885 1247 aa6.3□□□□□ -1.4
SF3A3-207ENST00000488934 XRCC5P13010 732 aaKnown RBP6.3□□□□□ -1.4
SF3A3-207ENST00000488934 ITPKAP23677 461 aa6.3□□□□□ -1.4
SF3A3-207ENST00000488934 ZNF280AP59817 542 aaPredicted RBP6.3□□□□□ -1.4
SF3A3-207ENST00000488934 SPRED3Q2MJR0 410 aa6.3□□□□□ -1.4
SF3A3-207ENST00000488934 TBC1D10BQ4KMP7 808 aaPredicted RBP6.3□□□□□ -1.4
SF3A3-207ENST00000488934 LRRC24Q50LG9 513 aa6.3□□□□□ -1.4
SF3A3-207ENST00000488934 RPS26P11Q5JNZ5 115 aaPredicted RBP6.3□□□□□ -1.4
SF3A3-207ENST00000488934 EXOSC6Q5RKV6 272 aaKnown RBP6.3□□□□□ -1.4
SF3A3-207ENST00000488934 TMEM57Q8N5G2 664 aa6.3□□□□□ -1.4
SF3A3-207ENST00000488934 VGLL2Q8N8G2 317 aa6.3□□□□□ -1.4
SF3A3-207ENST00000488934 C12orf50Q8NA57 414 aaPredicted RBP6.3□□□□□ -1.4
SF3A3-207ENST00000488934 LPIN2Q92539 896 aa6.3□□□□□ -1.4
SF3A3-207ENST00000488934 CORO1BQ9BR76 489 aa6.3□□□□□ -1.4
SF3A3-207ENST00000488934 YIPF2Q9BWQ6 316 aa6.3□□□□□ -1.4
SF3A3-207ENST00000488934 SUGCTQ9HAC7 445 aa6.3□□□□□ -1.4
SF3A3-207ENST00000488934 COPRSQ9NQ92 184 aa6.3□□□□□ -1.4
SF3A3-207ENST00000488934 GNL3LQ9NVN8 582 aaKnown RBP6.3□□□□□ -1.4
SF3A3-207ENST00000488934 DDX19BQ9UMR2 479 aa6.3□□□□□ -1.4
SF3A3-207ENST00000488934 AKAP2Q9Y2D5 859 aa6.3□□□□□ -1.4
SF3A3-207ENST00000488934 FAM205AQ6ZU69 1335 aa6.29□□□□□ -1.4
SF3A3-207ENST00000488934 B3GALT4O96024 378 aa6.29□□□□□ -1.4
SF3A3-207ENST00000488934 IGHA2P01877 340 aa6.29□□□□□ -1.4
SF3A3-207ENST00000488934 KLRK1P26718 216 aa6.29□□□□□ -1.4
SF3A3-207ENST00000488934 NF2P35240 595 aa6.29□□□□□ -1.4
SF3A3-207ENST00000488934 ECE1P42892 770 aa6.29□□□□□ -1.4
SF3A3-207ENST00000488934 RFX5P48382 616 aaPredicted RBP6.29□□□□□ -1.4
SF3A3-207ENST00000488934 AP3B2Q13367 1082 aa6.29□□□□□ -1.4
SF3A3-207ENST00000488934 POU4F3Q15319 338 aa6.29□□□□□ -1.4
SF3A3-207ENST00000488934 ATP2B3Q16720 1220 aa6.29□□□□□ -1.4
SF3A3-207ENST00000488934 KRT26Q7Z3Y9 468 aa6.29□□□□□ -1.4
SF3A3-207ENST00000488934 CLEC10AQ8IUN9 316 aa6.29□□□□□ -1.4
SF3A3-207ENST00000488934 APOBEC3FQ8IUX4 373 aaKnown RBP6.29□□□□□ -1.4
SF3A3-207ENST00000488934 FAM20CQ8IXL6 584 aa6.29□□□□□ -1.4
SF3A3-207ENST00000488934 ARMC10Q8N2F6 343 aa6.29□□□□□ -1.4
SF3A3-207ENST00000488934 SMG8Q8ND04 991 aaKnown RBP6.29□□□□□ -1.4
SF3A3-207ENST00000488934 TDRD7Q8NHU6 1098 aaKnown RBP6.29□□□□□ -1.4
SF3A3-207ENST00000488934 GIMAP7Q8NHV1 300 aa6.29□□□□□ -1.4
SF3A3-207ENST00000488934 KLHDC4Q8TBB5 520 aa6.29□□□□□ -1.4
SF3A3-207ENST00000488934 FAM84BQ96KN1 310 aaPredicted RBP6.29□□□□□ -1.4
SF3A3-207ENST00000488934 GMLQ99445 158 aa6.29□□□□□ -1.4
SF3A3-207ENST00000488934 TMPRSS13Q9BYE2 586 aa6.29□□□□□ -1.4
SF3A3-207ENST00000488934 PUS3Q9BZE2 481 aaKnown RBP6.29□□□□□ -1.4
SF3A3-207ENST00000488934 SIL1Q9H173 461 aa6.29□□□□□ -1.4
SF3A3-207ENST00000488934 KCNF1Q9H3M0 494 aa6.29□□□□□ -1.4
SF3A3-207ENST00000488934 ZNF576Q9H609 170 aa6.29□□□□□ -1.4
SF3A3-207ENST00000488934 KCNQ5Q9NR82 932 aa6.29□□□□□ -1.4
SF3A3-207ENST00000488934 GGA3Q9NZ52 723 aa6.29□□□□□ -1.4
SF3A3-207ENST00000488934 ABT1Q9ULW3 272 aaKnown RBP6.29□□□□□ -1.4
SF3A3-207ENST00000488934 RNF112Q9ULX5 631 aa6.29□□□□□ -1.4
SF3A3-207ENST00000488934 SUGT1Q9Y2Z0 365 aa6.29□□□□□ -1.4
SF3A3-207ENST00000488934 CNTNAP1P78357 1384 aa6.29□□□□□ -1.4
SF3A3-207ENST00000488934 PAPPA2Q9BXP8 1791 aa6.29□□□□□ -1.4
SF3A3-207ENST00000488934 TMEM238LA0A1B0GVL6 79 aa6.28□□□□□ -1.4
SF3A3-207ENST00000488934 TREHO43280 583 aa6.28□□□□□ -1.4
SF3A3-207ENST00000488934 CELF2O95319 508 aaKnown RBP6.28□□□□□ -1.4
SF3A3-207ENST00000488934 IGLV1-40P01703 118 aa6.28□□□□□ -1.4
SF3A3-207ENST00000488934 BMP3P12645 472 aa6.28□□□□□ -1.4
SF3A3-207ENST00000488934 FGFR2P21802 821 aa6.28□□□□□ -1.4
SF3A3-207ENST00000488934 GYG1P46976 350 aa6.28□□□□□ -1.4
SF3A3-207ENST00000488934 PREPP48147 710 aa6.28□□□□□ -1.4
SF3A3-207ENST00000488934 FKBP1BP68106 108 aa6.28□□□□□ -1.4
SF3A3-207ENST00000488934 ATP2B2Q01814 1243 aa6.28□□□□□ -1.4
SF3A3-207ENST00000488934 G3BP1Q13283 466 aaKnown RBP eCLIP6.28□□□□□ -1.4
SF3A3-207ENST00000488934 TNFAIP1Q13829 316 aa6.28□□□□□ -1.4
SF3A3-207ENST00000488934 LRP8Q14114 963 aa6.28□□□□□ -1.4
SF3A3-207ENST00000488934 PDE3AQ14432 1141 aa6.28□□□□□ -1.4
SF3A3-207ENST00000488934 MVPQ14764 893 aaKnown RBP6.28□□□□□ -1.4
SF3A3-207ENST00000488934 DLGAP5Q15398 846 aa6.28□□□□□ -1.4
SF3A3-207ENST00000488934 HSP90AB4PQ58FF6 505 aa6.28□□□□□ -1.4
SF3A3-207ENST00000488934 MFSD14BQ5SR56 506 aa6.28□□□□□ -1.4
SF3A3-207ENST00000488934 HGSNATQ68CP4 663 aa6.28□□□□□ -1.4
SF3A3-207ENST00000488934 DTHD1Q6ZMT9 781 aa6.28□□□□□ -1.4
SF3A3-207ENST00000488934 ERC1Q8IUD2 1116 aa6.28□□□□□ -1.4
SF3A3-207ENST00000488934 KIAA0825Q8IV33 1275 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms