RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 BRICD5Q6PL45 260 aa7.48□□□□□ -1.21
HDLBP-243ENST00000488923 TMEM179Q6ZVK1 233 aa7.48□□□□□ -1.21
HDLBP-243ENST00000488923 PDILTQ8N807 584 aa7.48□□□□□ -1.21
HDLBP-243ENST00000488923 RDH13Q8NBN7 331 aa7.48□□□□□ -1.21
HDLBP-243ENST00000488923 GPKOWQ92917 476 aaPredicted RBP eCLIP7.48□□□□□ -1.21
HDLBP-243ENST00000488923 MKL1Q969V6 931 aa7.48□□□□□ -1.21
HDLBP-243ENST00000488923 PAGE5Q96GU1 130 aa7.48□□□□□ -1.21
HDLBP-243ENST00000488923 MRGPRX2Q96LB1 330 aa7.48□□□□□ -1.21
HDLBP-243ENST00000488923 PSMD1Q99460 953 aa7.48□□□□□ -1.21
HDLBP-243ENST00000488923 XPO4Q9C0E2 1151 aaKnown RBP7.48□□□□□ -1.21
HDLBP-243ENST00000488923 KCNF1Q9H3M0 494 aa7.48□□□□□ -1.21
HDLBP-243ENST00000488923 PAXBP1Q9Y5B6 917 aa7.48□□□□□ -1.21
HDLBP-243ENST00000488923 ATRNL1Q5VV63 1379 aa7.47□□□□□ -1.21
HDLBP-243ENST00000488923 GOLGA6L9A6NEM1 432 aa7.47□□□□□ -1.21
HDLBP-243ENST00000488923 DYNC1I1O14576 645 aa7.47□□□□□ -1.21
HDLBP-243ENST00000488923 SKILP12757 684 aa7.47□□□□□ -1.21
HDLBP-243ENST00000488923 AKR1B1P15121 316 aa7.47□□□□□ -1.21
HDLBP-243ENST00000488923 BRD2P25440 801 aaKnown RBP7.47□□□□□ -1.21
HDLBP-243ENST00000488923 SHMT1P34896 483 aa7.47□□□□□ -1.21
HDLBP-243ENST00000488923 BAG6P46379 1132 aa7.47□□□□□ -1.21
HDLBP-243ENST00000488923 RBM5P52756 815 aaKnown RBP eCLIP7.47□□□□□ -1.21
HDLBP-243ENST00000488923 GRIN1Q05586 938 aa7.47□□□□□ -1.21
HDLBP-243ENST00000488923 CERKLQ49MI3 558 aaPredicted RBP7.47□□□□□ -1.21
HDLBP-243ENST00000488923 EARS2Q5JPH6 523 aaKnown RBP7.47□□□□□ -1.21
HDLBP-243ENST00000488923 RRAGBQ5VZM2 374 aa7.47□□□□□ -1.21
HDLBP-243ENST00000488923 TATDN1Q6P1N9 297 aa7.47□□□□□ -1.21
HDLBP-243ENST00000488923 USP17L2Q6R6M4 530 aa7.47□□□□□ -1.21
HDLBP-243ENST00000488923 RNF19BQ6ZMZ0 732 aa7.47□□□□□ -1.21
HDLBP-243ENST00000488923 MTERF4Q7Z6M4 381 aaKnown RBP7.47□□□□□ -1.21
HDLBP-243ENST00000488923 FILIP1Q7Z7B0 1213 aa7.47□□□□□ -1.21
HDLBP-243ENST00000488923 FCHSD1Q86WN1 690 aa7.47□□□□□ -1.21
HDLBP-243ENST00000488923 C4orf32Q8N8J7 132 aa7.47□□□□□ -1.21
HDLBP-243ENST00000488923 RASSF8Q8NHQ8 419 aa7.47□□□□□ -1.21
HDLBP-243ENST00000488923 NOC3LQ8WTT2 800 aaKnown RBP7.47□□□□□ -1.21
HDLBP-243ENST00000488923 C7orf43Q8WVR3 580 aa7.47□□□□□ -1.21
HDLBP-243ENST00000488923 ERCC4Q92889 916 aaPredicted RBP7.47□□□□□ -1.21
HDLBP-243ENST00000488923 HPS1Q92902 700 aa7.47□□□□□ -1.21
HDLBP-243ENST00000488923 CUL5Q93034 780 aa7.47□□□□□ -1.21
HDLBP-243ENST00000488923 CALML4Q96GE6 196 aa7.47□□□□□ -1.21
HDLBP-243ENST00000488923 EPSTI1Q96J88 318 aa7.47□□□□□ -1.21
HDLBP-243ENST00000488923 ZNF830Q96NB3 372 aaPredicted RBP7.47□□□□□ -1.21
HDLBP-243ENST00000488923 CAMKK2Q96RR4 588 aa7.47□□□□□ -1.21
HDLBP-243ENST00000488923 RIC8AQ9NPQ8 531 aa7.47□□□□□ -1.21
HDLBP-243ENST00000488923 DISC1Q9NRI5 854 aa7.47□□□□□ -1.21
HDLBP-243ENST00000488923 HERC5Q9UII4 1024 aaKnown RBP7.47□□□□□ -1.21
HDLBP-243ENST00000488923 R3HCC1Q9Y3T6 440 aaKnown RBP7.47□□□□□ -1.21
HDLBP-243ENST00000488923 NFE2L3Q9Y4A8 694 aa7.47□□□□□ -1.21
HDLBP-243ENST00000488923 TNS1Q9HBL0 1735 aaKnown RBP7.47□□□□□ -1.21
HDLBP-243ENST00000488923 FOCADQ5VW36 1801 aa7.46□□□□□ -1.21
HDLBP-243ENST00000488923 USP17L5A8MUK1 530 aa7.46□□□□□ -1.22
HDLBP-243ENST00000488923 MPHOSPH10O00566 681 aaKnown RBP7.46□□□□□ -1.22
HDLBP-243ENST00000488923 ZBTB5O15062 677 aa7.46□□□□□ -1.22
HDLBP-243ENST00000488923 PPIP5K2O43314 1243 aa7.46□□□□□ -1.22
HDLBP-243ENST00000488923 TPM1P09493 284 aa7.46□□□□□ -1.22
HDLBP-243ENST00000488923 GOLGA8HP0CJ92 632 aa7.46□□□□□ -1.22
HDLBP-243ENST00000488923 ZNF18P17022 549 aa7.46□□□□□ -1.22
HDLBP-243ENST00000488923 SCNN1DP51172 638 aa7.46□□□□□ -1.22
HDLBP-243ENST00000488923 AP3B2Q13367 1082 aa7.46□□□□□ -1.22
HDLBP-243ENST00000488923 PDIA5Q14554 519 aa7.46□□□□□ -1.22
HDLBP-243ENST00000488923 TPD52L1Q16890 204 aaPredicted RBP7.46□□□□□ -1.22
HDLBP-243ENST00000488923 INF2Q27J81 1249 aa7.46□□□□□ -1.22
HDLBP-243ENST00000488923 CCDC96Q2M329 555 aa7.46□□□□□ -1.22
HDLBP-243ENST00000488923 ZNF658Q5TYW1 1059 aaPredicted RBP7.46□□□□□ -1.22
HDLBP-243ENST00000488923 FKBP1CQ5VVH2 108 aa7.46□□□□□ -1.22
HDLBP-243ENST00000488923 MSL1Q68DK7 614 aa7.46□□□□□ -1.22
HDLBP-243ENST00000488923 PPP4R3AQ6IN85 833 aa7.46□□□□□ -1.22
HDLBP-243ENST00000488923 PDXDC2PQ6P474 469 aa7.46□□□□□ -1.22
HDLBP-243ENST00000488923 MOXD1Q6UVY6 613 aa7.46□□□□□ -1.22
HDLBP-243ENST00000488923 TMC6Q7Z403 805 aa7.46□□□□□ -1.22
HDLBP-243ENST00000488923 HOMER1Q86YM7 354 aa7.46□□□□□ -1.22
HDLBP-243ENST00000488923 KIAA0825Q8IV33 1275 aa7.46□□□□□ -1.22
HDLBP-243ENST00000488923 VSTM4Q8IW00 320 aa7.46□□□□□ -1.22
HDLBP-243ENST00000488923 ZSCAN29Q8IWY8 852 aaPredicted RBP7.46□□□□□ -1.22
HDLBP-243ENST00000488923 OGFOD1Q8N543 542 aa7.46□□□□□ -1.22
HDLBP-243ENST00000488923 KCTD17Q8N5Z5 321 aa7.46□□□□□ -1.22
HDLBP-243ENST00000488923 TTLL6Q8N841 843 aa7.46□□□□□ -1.22
HDLBP-243ENST00000488923 GMCL1P1Q8NEA9 526 aa7.46□□□□□ -1.22
HDLBP-243ENST00000488923 CACTINQ8WUQ7 758 aaKnown RBP7.46□□□□□ -1.22
HDLBP-243ENST00000488923 MTMR8Q96EF0 704 aa7.46□□□□□ -1.22
HDLBP-243ENST00000488923 GMCL1Q96IK5 515 aa7.46□□□□□ -1.22
HDLBP-243ENST00000488923 PIGSQ96S52 555 aa7.46□□□□□ -1.22
HDLBP-243ENST00000488923 DBNDD1Q9H9R9 158 aa7.46□□□□□ -1.22
HDLBP-243ENST00000488923 DDX4Q9NQI0 724 aaKnown RBP7.46□□□□□ -1.22
HDLBP-243ENST00000488923 FANCLQ9NW38 375 aa7.46□□□□□ -1.22
HDLBP-243ENST00000488923 RWDD2AQ9UIY3 292 aa7.46□□□□□ -1.22
HDLBP-243ENST00000488923 PYCARDQ9ULZ3 195 aa7.46□□□□□ -1.22
HDLBP-243ENST00000488923 MTMR7Q9Y216 660 aa7.46□□□□□ -1.22
HDLBP-243ENST00000488923 COL11A2P13942 1736 aaPredicted RBP7.46□□□□□ -1.22
HDLBP-243ENST00000488923 SYNRGQ9UMZ2 1314 aa7.46□□□□□ -1.22
HDLBP-243ENST00000488923 MYH6P13533 1939 aa7.45□□□□□ -1.22
HDLBP-243ENST00000488923 H7C1D1 291 aa7.45□□□□□ -1.22
HDLBP-243ENST00000488923 PSMA7O14818 248 aa7.45□□□□□ -1.22
HDLBP-243ENST00000488923 CCNT1O60563 726 aaKnown RBP7.45□□□□□ -1.22
HDLBP-243ENST00000488923 FOSP01100 380 aaPredicted RBP7.45□□□□□ -1.22
HDLBP-243ENST00000488923 RPN1P04843 607 aaKnown RBP7.45□□□□□ -1.22
HDLBP-243ENST00000488923 BMP6P22004 513 aa7.45□□□□□ -1.22
HDLBP-243ENST00000488923 GTF2F1P35269 517 aaKnown RBP eCLIP7.45□□□□□ -1.22
HDLBP-243ENST00000488923 SLC1A4P43007 532 aa7.45□□□□□ -1.22
HDLBP-243ENST00000488923 AFMP43652 599 aa7.45□□□□□ -1.22
HDLBP-243ENST00000488923 PAK1Q13153 545 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms