RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 CDC37Q16543 378 aaPredicted RBP21.57■■□□□ 1.04
HDAC6-231ENST00000488905 CCDC178Q5BJE1 867 aa21.57■■□□□ 1.04
HDAC6-231ENST00000488905 RGS22Q8NE09 1264 aa21.57■■□□□ 1.04
HDAC6-231ENST00000488905 UBA5Q9GZZ9 404 aa21.57■■□□□ 1.04
HDAC6-231ENST00000488905 PRDM12Q9H4Q4 367 aa21.57■■□□□ 1.04
HDAC6-231ENST00000488905 KAT14Q9H8E8 782 aa21.57■■□□□ 1.04
HDAC6-231ENST00000488905 GPHNQ9NQX3 736 aaPredicted RBP21.57■■□□□ 1.04
HDAC6-231ENST00000488905 TET1Q8NFU7 2136 aa21.56■■□□□ 1.04
HDAC6-231ENST00000488905 B4DLN1 442 aa21.56■■□□□ 1.04
HDAC6-231ENST00000488905 B4E1Z4 1266 aa21.56■■□□□ 1.04
HDAC6-231ENST00000488905 HIP1O00291 1037 aa21.56■■□□□ 1.04
HDAC6-231ENST00000488905 IGHDP01880 384 aa21.56■■□□□ 1.04
HDAC6-231ENST00000488905 CYP2C9P11712 490 aa21.56■■□□□ 1.04
HDAC6-231ENST00000488905 MRPL12P52815 198 aaKnown RBP21.56■■□□□ 1.04
HDAC6-231ENST00000488905 RPUSD2Q8IZ73 545 aaKnown RBP21.56■■□□□ 1.04
HDAC6-231ENST00000488905 COPS5Q92905 334 aa21.56■■□□□ 1.04
HDAC6-231ENST00000488905 VWCEQ96DN2 955 aa21.56■■□□□ 1.04
HDAC6-231ENST00000488905 DSCC1Q9BVC3 393 aa21.56■■□□□ 1.04
HDAC6-231ENST00000488905 MYH7BA7E2Y1 1941 aa21.56■■□□□ 1.04
HDAC6-231ENST00000488905 ABCB11O95342 1321 aa21.55■■□□□ 1.04
HDAC6-231ENST00000488905 A6NJR5 290 aa21.55■■□□□ 1.04
HDAC6-231ENST00000488905 PFKMP08237 780 aa21.55■■□□□ 1.04
HDAC6-231ENST00000488905 TXNP10599 105 aaKnown RBP21.55■■□□□ 1.04
HDAC6-231ENST00000488905 ASPRV1Q53RT3 343 aa21.55■■□□□ 1.04
HDAC6-231ENST00000488905 FAM47CQ5HY64 1035 aa21.55■■□□□ 1.04
HDAC6-231ENST00000488905 ENAHQ8N8S7 591 aaPredicted RBP21.55■■□□□ 1.04
HDAC6-231ENST00000488905 ZSCAN10Q96SZ4 725 aaPredicted RBP21.55■■□□□ 1.04
HDAC6-231ENST00000488905 MAF1Q9H063 256 aa21.55■■□□□ 1.04
HDAC6-231ENST00000488905 NKX2-4Q9H2Z4 354 aa21.55■■□□□ 1.04
HDAC6-231ENST00000488905 YBX2Q9Y2T7 364 aaKnown RBP21.55■■□□□ 1.04
HDAC6-231ENST00000488905 KPNA6O60684 536 aa21.54■■□□□ 1.04
HDAC6-231ENST00000488905 ARIH2O95376 493 aa21.54■■□□□ 1.04
HDAC6-231ENST00000488905 TTLL4Q14679 1199 aa21.54■■□□□ 1.04
HDAC6-231ENST00000488905 NBPF20Q3BBV1 942 aa21.54■■□□□ 1.04
HDAC6-231ENST00000488905 NFRKBQ6P4R8 1299 aa21.54■■□□□ 1.04
HDAC6-231ENST00000488905 ADGRF4Q8IZF3 695 aa21.54■■□□□ 1.04
HDAC6-231ENST00000488905 ANKS1AQ92625 1134 aa21.54■■□□□ 1.04
HDAC6-231ENST00000488905 SLC4A7Q9Y6M7 1214 aa21.54■■□□□ 1.04
HDAC6-231ENST00000488905 PTPRSQ13332 1948 aa21.54■■□□□ 1.04
HDAC6-231ENST00000488905 NCOR1O75376 2440 aa21.53■■□□□ 1.04
HDAC6-231ENST00000488905 ZBBXA8MT70 800 aa21.53■■□□□ 1.04
HDAC6-231ENST00000488905 IMMTQ16891 758 aaKnown RBP21.53■■□□□ 1.04
HDAC6-231ENST00000488905 SYMPKQ92797 1274 aaKnown RBP21.53■■□□□ 1.04
HDAC6-231ENST00000488905 SLC28A3Q9HAS3 691 aa21.53■■□□□ 1.04
HDAC6-231ENST00000488905 QRICH1Q2TAL8 776 aa21.52■■□□□ 1.04
HDAC6-231ENST00000488905 SYTL5Q8TDW5 730 aaPredicted RBP21.52■■□□□ 1.04
HDAC6-231ENST00000488905 PPP1R13LQ8WUF5 828 aa21.52■■□□□ 1.04
HDAC6-231ENST00000488905 YTHDC1Q96MU7 727 aaKnown RBP21.52■■□□□ 1.04
HDAC6-231ENST00000488905 ZSWIM5Q9P217 1185 aa21.52■■□□□ 1.04
HDAC6-231ENST00000488905 COL20A1Q9P218 1284 aa21.52■■□□□ 1.04
HDAC6-231ENST00000488905 PITPNM1O00562 1244 aa21.51■■□□□ 1.03
HDAC6-231ENST00000488905 DHX16O60231 1041 aaKnown RBP21.51■■□□□ 1.03
HDAC6-231ENST00000488905 PARP1P09874 1014 aaKnown RBP21.51■■□□□ 1.03
HDAC6-231ENST00000488905 RABGGTBP53611 331 aa21.51■■□□□ 1.03
HDAC6-231ENST00000488905 PTPN11Q06124 597 aaPredicted RBP21.51■■□□□ 1.03
HDAC6-231ENST00000488905 ADGRE1Q14246 886 aa21.51■■□□□ 1.03
HDAC6-231ENST00000488905 TJAP1Q5JTD0 557 aa21.51■■□□□ 1.03
HDAC6-231ENST00000488905 CCDC62Q6P9F0 684 aa21.51■■□□□ 1.03
HDAC6-231ENST00000488905 DEFB128Q7Z7B8 93 aa21.51■■□□□ 1.03
HDAC6-231ENST00000488905 MCF2L2Q86YR7 1114 aa21.51■■□□□ 1.03
HDAC6-231ENST00000488905 EXOC6Q8TAG9 804 aa21.51■■□□□ 1.03
HDAC6-231ENST00000488905 NSUN6Q8TEA1 469 aaKnown RBP21.51■■□□□ 1.03
HDAC6-231ENST00000488905 TBC1D5Q92609 795 aa21.51■■□□□ 1.03
HDAC6-231ENST00000488905 UBAC1Q9BSL1 405 aa21.51■■□□□ 1.03
HDAC6-231ENST00000488905 KRT23Q9C075 422 aa21.51■■□□□ 1.03
HDAC6-231ENST00000488905 CNNM2Q9H8M5 875 aa21.51■■□□□ 1.03
HDAC6-231ENST00000488905 PRDM6Q9NQX0 595 aa21.51■■□□□ 1.03
HDAC6-231ENST00000488905 CTNNA3Q9UI47 895 aa21.51■■□□□ 1.03
HDAC6-231ENST00000488905 PCDHA11Q9Y5I1 949 aa21.51■■□□□ 1.03
HDAC6-231ENST00000488905 BAZ2BQ9UIF8 2168 aaKnown RBP21.51■■□□□ 1.03
HDAC6-231ENST00000488905 ATP2A2P16615 1042 aaKnown RBP21.5■■□□□ 1.03
HDAC6-231ENST00000488905 RFC2P35250 354 aa21.5■■□□□ 1.03
HDAC6-231ENST00000488905 PPP2R2DQ66LE6 453 aa21.5■■□□□ 1.03
HDAC6-231ENST00000488905 FBXO11Q86XK2 927 aa21.5■■□□□ 1.03
HDAC6-231ENST00000488905 PPM1EQ8WY54 764 aa21.5■■□□□ 1.03
HDAC6-231ENST00000488905 TAAR1Q96RJ0 339 aa21.5■■□□□ 1.03
HDAC6-231ENST00000488905 MRPL11Q9Y3B7 192 aaKnown RBP21.5■■□□□ 1.03
HDAC6-231ENST00000488905 GH1P01241 217 aa21.49■■□□□ 1.03
HDAC6-231ENST00000488905 MMP3P08254 477 aa21.49■■□□□ 1.03
HDAC6-231ENST00000488905 ARHGAP1Q07960 439 aa21.49■■□□□ 1.03
HDAC6-231ENST00000488905 LY6KQ17RY6 165 aa21.49■■□□□ 1.03
HDAC6-231ENST00000488905 SEPT14Q6ZU15 432 aa21.49■■□□□ 1.03
HDAC6-231ENST00000488905 AFG1LQ8WV93 481 aa21.49■■□□□ 1.03
HDAC6-231ENST00000488905 IWS1Q96ST2 819 aa21.49■■□□□ 1.03
HDAC6-231ENST00000488905 RMDN3Q96TC7 470 aa21.49■■□□□ 1.03
HDAC6-231ENST00000488905 IL25Q9H293 177 aa21.49■■□□□ 1.03
HDAC6-231ENST00000488905 JMJD4Q9H9V9 463 aa21.49■■□□□ 1.03
HDAC6-231ENST00000488905 NOD1Q9Y239 953 aa21.49■■□□□ 1.03
HDAC6-231ENST00000488905 ACTN1P12814 892 aa21.48■■□□□ 1.03
HDAC6-231ENST00000488905 MYOGP15173 224 aa21.48■■□□□ 1.03
HDAC6-231ENST00000488905 IGFBP4P22692 258 aa21.48■■□□□ 1.03
HDAC6-231ENST00000488905 STXBP2Q15833 593 aa21.48■■□□□ 1.03
HDAC6-231ENST00000488905 IFIT1BQ5T764 474 aaKnown RBP21.48■■□□□ 1.03
HDAC6-231ENST00000488905 THEGQ9P2T0 379 aa21.48■■□□□ 1.03
HDAC6-231ENST00000488905 PRRC2BQ5JSZ5 2229 aaKnown RBP21.48■■□□□ 1.03
HDAC6-231ENST00000488905 IQCF3P0C7M6 154 aa21.47■■□□□ 1.03
HDAC6-231ENST00000488905 EIF2AK2P19525 551 aaKnown RBP21.47■■□□□ 1.03
HDAC6-231ENST00000488905 CHMP4BP1P59074 171 aa21.47■■□□□ 1.03
HDAC6-231ENST00000488905 BFSP2Q13515 415 aa21.47■■□□□ 1.03
HDAC6-231ENST00000488905 RETREG2Q8NC44 543 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms