RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 RCAN1P53805 252 aa18.45■□□□□ 0.54
CTDSP1-209ENST00000488627 Q6ZUG5 572 aa18.45■□□□□ 0.54
CTDSP1-209ENST00000488627 TLK2Q86UE8 772 aa18.45■□□□□ 0.54
CTDSP1-209ENST00000488627 CCDC82Q8N4S0 544 aa18.45■□□□□ 0.54
CTDSP1-209ENST00000488627 MPHOSPH6Q99547 160 aaKnown RBP18.45■□□□□ 0.54
CTDSP1-209ENST00000488627 SPC25Q9HBM1 224 aa18.45■□□□□ 0.54
CTDSP1-209ENST00000488627 PXMP2Q9NR77 195 aa18.45■□□□□ 0.54
CTDSP1-209ENST00000488627 PCDH10Q9P2E7 1040 aa18.45■□□□□ 0.54
CTDSP1-209ENST00000488627 BAZ2BQ9UIF8 2168 aaKnown RBP18.45■□□□□ 0.54
CTDSP1-209ENST00000488627 MCM3APO60318 1980 aa18.44■□□□□ 0.54
CTDSP1-209ENST00000488627 KLF18A0A0U1RQI7 1052 aa18.44■□□□□ 0.54
CTDSP1-209ENST00000488627 hCG_1642624A0A1W2PR95 340 aa18.44■□□□□ 0.54
CTDSP1-209ENST00000488627 B4DLN1 442 aa18.44■□□□□ 0.54
CTDSP1-209ENST00000488627 GCOM1H8Y6P7 765 aaPredicted RBP18.44■□□□□ 0.54
CTDSP1-209ENST00000488627 ZBTB43O43298 467 aa18.44■□□□□ 0.54
CTDSP1-209ENST00000488627 ASGR1P07306 291 aa18.44■□□□□ 0.54
CTDSP1-209ENST00000488627 NR3C2P08235 984 aa18.44■□□□□ 0.54
CTDSP1-209ENST00000488627 POLR2MP0CAP2 368 aa18.44■□□□□ 0.54
CTDSP1-209ENST00000488627 SYN1P17600 705 aa18.44■□□□□ 0.54
CTDSP1-209ENST00000488627 MRPL12P52815 198 aaKnown RBP18.44■□□□□ 0.54
CTDSP1-209ENST00000488627 BEX3Q00994 111 aa18.44■□□□□ 0.54
CTDSP1-209ENST00000488627 TRIM60Q495X7 471 aa18.44■□□□□ 0.54
CTDSP1-209ENST00000488627 ARHGEF16Q5VV41 709 aa18.44■□□□□ 0.54
CTDSP1-209ENST00000488627 CCDC62Q6P9F0 684 aa18.44■□□□□ 0.54
CTDSP1-209ENST00000488627 PCSK9Q8NBP7 692 aaKnown RBP18.44■□□□□ 0.54
CTDSP1-209ENST00000488627 ZSWIM6Q9HCJ5 1215 aa18.44■□□□□ 0.54
CTDSP1-209ENST00000488627 DNAH12Q6ZR08 3092 aa18.44■□□□□ 0.54
CTDSP1-209ENST00000488627 ARIH2O95376 493 aa18.43■□□□□ 0.54
CTDSP1-209ENST00000488627 EIF2AK2P19525 551 aaKnown RBP18.43■□□□□ 0.54
CTDSP1-209ENST00000488627 CASTP20810 708 aaKnown RBP18.43■□□□□ 0.54
CTDSP1-209ENST00000488627 CDC27P30260 824 aa18.43■□□□□ 0.54
CTDSP1-209ENST00000488627 APOBRQ0VD83 1088 aa18.43■□□□□ 0.54
CTDSP1-209ENST00000488627 STXBP2Q15833 593 aa18.43■□□□□ 0.54
CTDSP1-209ENST00000488627 FSCN1Q16658 493 aaKnown RBP18.43■□□□□ 0.54
CTDSP1-209ENST00000488627 RTN1Q16799 776 aa18.43■□□□□ 0.54
CTDSP1-209ENST00000488627 CHRDL2Q6WN34 429 aa18.43■□□□□ 0.54
CTDSP1-209ENST00000488627 SCFD2Q8WU76 684 aa18.43■□□□□ 0.54
CTDSP1-209ENST00000488627 BRF1Q92994 677 aa18.43■□□□□ 0.54
CTDSP1-209ENST00000488627 GDF15Q99988 308 aa18.43■□□□□ 0.54
CTDSP1-209ENST00000488627 PDCD2LQ9BRP1 358 aa18.43■□□□□ 0.54
CTDSP1-209ENST00000488627 RBM28Q9NW13 759 aaKnown RBP18.43■□□□□ 0.54
CTDSP1-209ENST00000488627 SEC63Q9UGP8 760 aaKnown RBP18.43■□□□□ 0.54
CTDSP1-209ENST00000488627 ATP11BQ9Y2G3 1177 aa18.43■□□□□ 0.54
CTDSP1-209ENST00000488627 ELP1O95163 1332 aa18.43■□□□□ 0.54
CTDSP1-209ENST00000488627 ALPK3Q96L96 1907 aa18.43■□□□□ 0.54
CTDSP1-209ENST00000488627 MEIS2O14770 477 aa18.42■□□□□ 0.54
CTDSP1-209ENST00000488627 RGS20O76081 388 aa18.42■□□□□ 0.54
CTDSP1-209ENST00000488627 CDK7P50613 346 aa18.42■□□□□ 0.54
CTDSP1-209ENST00000488627 EVCP57679 992 aa18.42■□□□□ 0.54
CTDSP1-209ENST00000488627 TLE2Q04725 743 aa18.42■□□□□ 0.54
CTDSP1-209ENST00000488627 HABP4Q5JVS0 413 aaKnown RBP18.42■□□□□ 0.54
CTDSP1-209ENST00000488627 RUFY3Q7L099 469 aa18.42■□□□□ 0.54
CTDSP1-209ENST00000488627 VSIG10LQ86VR7 867 aa18.42■□□□□ 0.54
CTDSP1-209ENST00000488627 COPS5Q92905 334 aa18.42■□□□□ 0.54
CTDSP1-209ENST00000488627 TM6SF1Q9BZW5 370 aa18.42■□□□□ 0.54
CTDSP1-209ENST00000488627 AP5M1Q9H0R1 490 aa18.42■□□□□ 0.54
CTDSP1-209ENST00000488627 STARD7Q9NQZ5 370 aa18.42■□□□□ 0.54
CTDSP1-209ENST00000488627 RBM27Q9P2N5 1060 aaKnown RBP18.42■□□□□ 0.54
CTDSP1-209ENST00000488627 CNTNAP5Q8WYK1 1306 aa18.42■□□□□ 0.54
CTDSP1-209ENST00000488627 RANBP2P49792 3224 aaKnown RBP18.41■□□□□ 0.54
CTDSP1-209ENST00000488627 GOLGA8AA7E2F4 631 aa18.41■□□□□ 0.54
CTDSP1-209ENST00000488627 GOLGA8BA8MQT2 603 aa18.41■□□□□ 0.54
CTDSP1-209ENST00000488627 PIK3CDO00329 1044 aa18.41■□□□□ 0.54
CTDSP1-209ENST00000488627 NKRFO15226 690 aaKnown RBP eCLIP18.41■□□□□ 0.541e-12■□□□□ 11.3
CTDSP1-209ENST00000488627 EIF3JO75822 258 aaKnown RBP18.41■□□□□ 0.54
CTDSP1-209ENST00000488627 ADD1P35611 737 aaKnown RBP18.41■□□□□ 0.54
CTDSP1-209ENST00000488627 PGM5Q15124 567 aa18.41■□□□□ 0.54
CTDSP1-209ENST00000488627 USP17L6PQ6QN14 398 aa18.41■□□□□ 0.54
CTDSP1-209ENST00000488627 FCHSD1Q86WN1 690 aa18.41■□□□□ 0.54
CTDSP1-209ENST00000488627 IL31RAQ8NI17 732 aa18.41■□□□□ 0.54
CTDSP1-209ENST00000488627 GLT1D1Q96MS3 346 aa18.41■□□□□ 0.54
CTDSP1-209ENST00000488627 TXNP10599 105 aaKnown RBP18.4■□□□□ 0.54
CTDSP1-209ENST00000488627 FGD1P98174 961 aa18.4■□□□□ 0.54
CTDSP1-209ENST00000488627 TOB2Q14106 344 aaPredicted RBP18.4■□□□□ 0.54
CTDSP1-209ENST00000488627 TTLL4Q14679 1199 aa18.4■□□□□ 0.54
CTDSP1-209ENST00000488627 PPP2R5BQ15173 497 aa18.4■□□□□ 0.54
CTDSP1-209ENST00000488627 CXCL17Q6UXB2 119 aa18.4■□□□□ 0.54
CTDSP1-209ENST00000488627 SEPT14Q6ZU15 432 aa18.4■□□□□ 0.54
CTDSP1-209ENST00000488627 ANKRD33Q7Z3H0 272 aa18.4■□□□□ 0.54
CTDSP1-209ENST00000488627 V9GY48 417 aaPredicted RBP18.4■□□□□ 0.54
CTDSP1-209ENST00000488627 FRMPD4Q14CM0 1322 aa18.4■□□□□ 0.54
CTDSP1-209ENST00000488627 LRRC37A2A6NM11 1700 aa18.4■□□□□ 0.54
CTDSP1-209ENST00000488627 TRIM43BA6NCK2 446 aa18.39■□□□□ 0.53
CTDSP1-209ENST00000488627 BMP8BP34820 402 aa18.39■□□□□ 0.53
CTDSP1-209ENST00000488627 MAGEA10P43363 369 aaPredicted RBP18.39■□□□□ 0.53
CTDSP1-209ENST00000488627 TYW1BQ6NUM6 668 aa18.39■□□□□ 0.53
CTDSP1-209ENST00000488627 SH3RF1Q7Z6J0 888 aa18.39■□□□□ 0.53
CTDSP1-209ENST00000488627 SLC43A3Q8NBI5 491 aa18.39■□□□□ 0.53
CTDSP1-209ENST00000488627 TRIM43Q96BQ3 446 aaPredicted RBP18.39■□□□□ 0.53
CTDSP1-209ENST00000488627 TOX2Q96NM4 488 aa18.39■□□□□ 0.53
CTDSP1-209ENST00000488627 PSTPIP2Q9H939 334 aa18.39■□□□□ 0.53
CTDSP1-209ENST00000488627 PDLIM7Q9NR12 457 aa18.39■□□□□ 0.53
CTDSP1-209ENST00000488627 DDX41Q9UJV9 622 aaKnown RBP18.39■□□□□ 0.53
CTDSP1-209ENST00000488627 GRIN2DO15399 1336 aa18.39■□□□□ 0.53
CTDSP1-209ENST00000488627 NID2Q14112 1375 aa18.39■□□□□ 0.53
CTDSP1-209ENST00000488627 A6NJR5 290 aa18.38■□□□□ 0.53
CTDSP1-209ENST00000488627 ARVCFO00192 962 aa18.38■□□□□ 0.53
CTDSP1-209ENST00000488627 ZEB2O60315 1214 aa18.38■□□□□ 0.53
CTDSP1-209ENST00000488627 CABYRO75952 493 aa18.38■□□□□ 0.53
CTDSP1-209ENST00000488627 MYCLP12524 364 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms