RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 CATIPQ7Z7H3 387 aa26.85■■□□□ 1.89
CUL4A-209ENST00000488558 OR6J1Q8NGC5 347 aa26.85■■□□□ 1.89
CUL4A-209ENST00000488558 IGDCC4Q8TDY8 1250 aa26.85■■□□□ 1.89
CUL4A-209ENST00000488558 TAAR1Q96RJ0 339 aa26.85■■□□□ 1.89
CUL4A-209ENST00000488558 RMDN3Q96TC7 470 aa26.85■■□□□ 1.89
CUL4A-209ENST00000488558 MAP3K14Q99558 947 aa26.85■■□□□ 1.89
CUL4A-209ENST00000488558 SENP2Q9HC62 589 aa26.85■■□□□ 1.89
CUL4A-209ENST00000488558 OPLAHO14841 1288 aa26.84■■□□□ 1.89
CUL4A-209ENST00000488558 PPP1R11O60927 126 aaPredicted RBP26.84■■□□□ 1.89
CUL4A-209ENST00000488558 EPHB4P54760 987 aa26.84■■□□□ 1.89
CUL4A-209ENST00000488558 CHST3Q7LGC8 479 aa26.84■■□□□ 1.89
CUL4A-209ENST00000488558 TXNP10599 105 aaKnown RBP26.83■■□□□ 1.89
CUL4A-209ENST00000488558 PURAQ00577 322 aaKnown RBP26.83■■□□□ 1.89
CUL4A-209ENST00000488558 STXBP2Q15833 593 aa26.83■■□□□ 1.89
CUL4A-209ENST00000488558 SLC35G1Q2M3R5 365 aa26.83■■□□□ 1.89
CUL4A-209ENST00000488558 Q7L0L9 218 aa26.83■■□□□ 1.89
CUL4A-209ENST00000488558 MTMR10Q9NXD2 777 aa26.83■■□□□ 1.89
CUL4A-209ENST00000488558 PCDHA1Q9Y5I3 950 aa26.83■■□□□ 1.89
CUL4A-209ENST00000488558 SCN10AQ9Y5Y9 1956 aa26.83■■□□□ 1.89
CUL4A-209ENST00000488558 A6NJR5 290 aa26.82■■□□□ 1.88
CUL4A-209ENST00000488558 KPNA6O60684 536 aa26.82■■□□□ 1.88
CUL4A-209ENST00000488558 CFBP00751 764 aa26.82■■□□□ 1.88
CUL4A-209ENST00000488558 SMAD3P84022 425 aaKnown RBP26.82■■□□□ 1.88
CUL4A-209ENST00000488558 PPIGQ13427 754 aaKnown RBP eCLIP26.82■■□□□ 1.882e-9■□□□□ 9.6
CUL4A-209ENST00000488558 CCDC62Q6P9F0 684 aa26.82■■□□□ 1.88
CUL4A-209ENST00000488558 MTG1Q9BT17 334 aaPredicted RBP26.82■■□□□ 1.88
CUL4A-209ENST00000488558 LY9Q9HBG7 655 aa26.82■■□□□ 1.88
CUL4A-209ENST00000488558 CYTH3O43739 400 aa26.81■■□□□ 1.88
CUL4A-209ENST00000488558 DDAH1O94760 285 aa26.81■■□□□ 1.88
CUL4A-209ENST00000488558 ARHGEF16Q5VV41 709 aa26.81■■□□□ 1.88
CUL4A-209ENST00000488558 CASC1Q6TDU7 716 aa26.81■■□□□ 1.88
CUL4A-209ENST00000488558 HOMER1Q86YM7 354 aa26.81■■□□□ 1.88
CUL4A-209ENST00000488558 TMEM199Q8N511 208 aa26.81■■□□□ 1.88
CUL4A-209ENST00000488558 RNPC3Q96LT9 517 aaKnown RBP26.81■■□□□ 1.88
CUL4A-209ENST00000488558 PIGSQ96S52 555 aa26.81■■□□□ 1.88
CUL4A-209ENST00000488558 PXMP2Q9NR77 195 aa26.81■■□□□ 1.88
CUL4A-209ENST00000488558 SLC27A2O14975 620 aa26.8■■□□□ 1.88
CUL4A-209ENST00000488558 ARIH2O95376 493 aa26.8■■□□□ 1.88
CUL4A-209ENST00000488558 MCM5P33992 734 aa26.8■■□□□ 1.88
CUL4A-209ENST00000488558 PSMC6P62333 389 aa26.8■■□□□ 1.88
CUL4A-209ENST00000488558 NECTIN1Q15223 517 aa26.8■■□□□ 1.88
CUL4A-209ENST00000488558 TMEM87BQ96K49 555 aa26.8■■□□□ 1.88
CUL4A-209ENST00000488558 ANO2Q9NQ90 1003 aa26.8■■□□□ 1.88
CUL4A-209ENST00000488558 GPHNQ9NQX3 736 aaPredicted RBP26.8■■□□□ 1.88
CUL4A-209ENST00000488558 PNMA6FA0A0J9YX94 578 aa26.79■■□□□ 1.88
CUL4A-209ENST00000488558 PRC1O43663 620 aa26.79■■□□□ 1.88
CUL4A-209ENST00000488558 EIF3JO75822 258 aaKnown RBP26.79■■□□□ 1.88
CUL4A-209ENST00000488558 MYL3P08590 195 aa26.79■■□□□ 1.88
CUL4A-209ENST00000488558 ZNF654Q8IZM8 581 aa26.79■■□□□ 1.88
CUL4A-209ENST00000488558 TMTC2Q8N394 836 aa26.79■■□□□ 1.88
CUL4A-209ENST00000488558 COPS5Q92905 334 aa26.79■■□□□ 1.88
CUL4A-209ENST00000488558 PPP1R12CQ9BZL4 782 aa26.79■■□□□ 1.88
CUL4A-209ENST00000488558 ALDH8A1Q9H2A2 487 aaPredicted RBP26.79■■□□□ 1.88
CUL4A-209ENST00000488558 LAMA2P24043 3122 aaKnown RBP26.79■■□□□ 1.88
CUL4A-209ENST00000488558 B4GALT4O60513 344 aa26.78■■□□□ 1.88
CUL4A-209ENST00000488558 NR3C2P08235 984 aa26.78■■□□□ 1.88
CUL4A-209ENST00000488558 EIF2AK2P19525 551 aaKnown RBP26.78■■□□□ 1.88
CUL4A-209ENST00000488558 SMARCA1P28370 1054 aa26.78■■□□□ 1.88
CUL4A-209ENST00000488558 KIF5BP33176 963 aa26.78■■□□□ 1.88
CUL4A-209ENST00000488558 CREB3L3Q68CJ9 461 aa26.78■■□□□ 1.88
CUL4A-209ENST00000488558 CTCFLQ8NI51 663 aaPredicted RBP26.78■■□□□ 1.88
CUL4A-209ENST00000488558 SPZ1Q9BXG8 430 aa26.78■■□□□ 1.88
CUL4A-209ENST00000488558 HIPK3Q9H422 1215 aa26.78■■□□□ 1.88
CUL4A-209ENST00000488558 STXBP5LQ9Y2K9 1186 aa26.78■■□□□ 1.88
CUL4A-209ENST00000488558 BAZ2BQ9UIF8 2168 aaKnown RBP26.77■■□□□ 1.88
CUL4A-209ENST00000488558 SH2B2O14492 632 aaPredicted RBP26.77■■□□□ 1.88
CUL4A-209ENST00000488558 GH1P01241 217 aa26.77■■□□□ 1.88
CUL4A-209ENST00000488558 ZNF697Q5TEC3 545 aa26.77■■□□□ 1.88
CUL4A-209ENST00000488558 PSRC1Q6PGN9 363 aaPredicted RBP26.77■■□□□ 1.88
CUL4A-209ENST00000488558 SEPT14Q6ZU15 432 aa26.77■■□□□ 1.88
CUL4A-209ENST00000488558 PDCD2LQ9BRP1 358 aa26.77■■□□□ 1.88
CUL4A-209ENST00000488558 TRPV6Q9H1D0 765 aa26.77■■□□□ 1.88
CUL4A-209ENST00000488558 SUPT20HL2P0C7V6 817 aa26.76■■□□□ 1.87
CUL4A-209ENST00000488558 CSF2RAP15509 400 aa26.76■■□□□ 1.87
CUL4A-209ENST00000488558 LIFRP42702 1097 aa26.76■■□□□ 1.87
CUL4A-209ENST00000488558 ARHGAP1Q07960 439 aa26.76■■□□□ 1.87
CUL4A-209ENST00000488558 NFRKBQ6P4R8 1299 aa26.76■■□□□ 1.87
CUL4A-209ENST00000488558 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.76■■□□□ 1.873e-6■□□□□ 9.9
CUL4A-209ENST00000488558 LZTS2Q9BRK4 669 aa26.76■■□□□ 1.87
CUL4A-209ENST00000488558 NOC4LQ9BVI4 516 aaKnown RBP26.76■■□□□ 1.87
CUL4A-209ENST00000488558 GCOM1H8Y6P7 765 aaPredicted RBP26.75■■□□□ 1.87
CUL4A-209ENST00000488558 POLR2MP0CAP2 368 aa26.75■■□□□ 1.87
CUL4A-209ENST00000488558 PTPN11Q06124 597 aaPredicted RBP26.75■■□□□ 1.87
CUL4A-209ENST00000488558 RNF20Q5VTR2 975 aa26.75■■□□□ 1.87
CUL4A-209ENST00000488558 EMID1Q96A84 441 aaPredicted RBP26.75■■□□□ 1.87
CUL4A-209ENST00000488558 TMEM265A0A087WTH1 108 aa26.74■■□□□ 1.87
CUL4A-209ENST00000488558 MMP3P08254 477 aa26.74■■□□□ 1.87
CUL4A-209ENST00000488558 CALM1P0DP23 149 aa26.74■■□□□ 1.87
CUL4A-209ENST00000488558 CALM2P0DP24 149 aa26.74■■□□□ 1.87
CUL4A-209ENST00000488558 CALM3P0DP25 149 aa26.74■■□□□ 1.87
CUL4A-209ENST00000488558 CYP2C18P33260 490 aa26.74■■□□□ 1.87
CUL4A-209ENST00000488558 GNAQP50148 359 aa26.74■■□□□ 1.87
CUL4A-209ENST00000488558 TMEM240Q5SV17 173 aa26.74■■□□□ 1.87
CUL4A-209ENST00000488558 RASIP1Q5U651 963 aa26.74■■□□□ 1.87
CUL4A-209ENST00000488558 KCNV1Q6PIU1 500 aa26.74■■□□□ 1.87
CUL4A-209ENST00000488558 C16orf59Q7L2K0 433 aa26.74■■□□□ 1.87
CUL4A-209ENST00000488558 SKAP1Q86WV1 359 aa26.74■■□□□ 1.87
CUL4A-209ENST00000488558 IL23AQ9NPF7 189 aa26.74■■□□□ 1.87
CUL4A-209ENST00000488558 DDX41Q9UJV9 622 aaKnown RBP26.74■■□□□ 1.87
CUL4A-209ENST00000488558 CCDC69A6NI79 296 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms