RNA–Protein interactions for RNA: ENST00000488553.3

RN7SL561P-201, Transcript of RNA, 7SL, cytoplasmic 561, pseudogene, humanhuman

BASIC

Gene RN7SL561P, Length 281 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL561P-201ENST00000488553 STK17AQ9UEE5 414 aa7.58□□□□□ -1.2
RN7SL561P-201ENST00000488553 CNOT7Q9UIV1 285 aaKnown RBP7.58□□□□□ -1.2
RN7SL561P-201ENST00000488553 FEM1BQ9UK73 627 aa7.58□□□□□ -1.2
RN7SL561P-201ENST00000488553 PCDHA12Q9UN75 941 aa7.58□□□□□ -1.2
RN7SL561P-201ENST00000488553 PVALEFA0A1B0GWK0 134 aa7.57□□□□□ -1.2
RN7SL561P-201ENST00000488553 H7C1D1 291 aa7.57□□□□□ -1.2
RN7SL561P-201ENST00000488553 TBX3O15119 743 aa7.57□□□□□ -1.2
RN7SL561P-201ENST00000488553 CTNND1O60716 968 aaKnown RBP7.57□□□□□ -1.2
RN7SL561P-201ENST00000488553 CIITAP33076 1130 aa7.57□□□□□ -1.2
RN7SL561P-201ENST00000488553 SREBF1P36956 1147 aa7.57□□□□□ -1.2
RN7SL561P-201ENST00000488553 ARHGAP4P98171 946 aa7.57□□□□□ -1.2
RN7SL561P-201ENST00000488553 TNFAIP1Q13829 316 aa7.57□□□□□ -1.2
RN7SL561P-201ENST00000488553 COBLL1Q53SF7 1204 aa7.57□□□□□ -1.2
RN7SL561P-201ENST00000488553 KRT79Q5XKE5 535 aa7.57□□□□□ -1.2
RN7SL561P-201ENST00000488553 KLHL10Q6JEL2 608 aa7.57□□□□□ -1.2
RN7SL561P-201ENST00000488553 SV2BQ7L1I2 683 aa7.57□□□□□ -1.2
RN7SL561P-201ENST00000488553 SAMD7Q7Z3H4 446 aa7.57□□□□□ -1.2
RN7SL561P-201ENST00000488553 MICALL2Q8IY33 904 aa7.57□□□□□ -1.2
RN7SL561P-201ENST00000488553 SLFN12Q8IYM2 578 aa7.57□□□□□ -1.2
RN7SL561P-201ENST00000488553 NELFBQ8WX92 580 aa7.57□□□□□ -1.2
RN7SL561P-201ENST00000488553 RAD54LQ92698 747 aa7.57□□□□□ -1.2
RN7SL561P-201ENST00000488553 DHTKD1Q96HY7 919 aaPredicted RBP7.57□□□□□ -1.2
RN7SL561P-201ENST00000488553 GLIS2Q9BZE0 524 aaPredicted RBP7.57□□□□□ -1.2
RN7SL561P-201ENST00000488553 TRIM9Q9C026 710 aa7.57□□□□□ -1.2
RN7SL561P-201ENST00000488553 DEFB129Q9H1M3 183 aa7.57□□□□□ -1.2
RN7SL561P-201ENST00000488553 ADD3Q9UEY8 706 aaKnown RBP7.57□□□□□ -1.2
RN7SL561P-201ENST00000488553 LIMA1Q9UHB6 759 aaKnown RBP7.57□□□□□ -1.2
RN7SL561P-201ENST00000488553 SYNRGQ9UMZ2 1314 aa7.56□□□□□ -1.2
RN7SL561P-201ENST00000488553 MYMKA6NI61 221 aa7.56□□□□□ -1.2
RN7SL561P-201ENST00000488553 SPDYE3A6NKU9 549 aa7.56□□□□□ -1.2
RN7SL561P-201ENST00000488553 MARCH6O60337 910 aa7.56□□□□□ -1.2
RN7SL561P-201ENST00000488553 HOXA7P31268 230 aaPredicted RBP7.56□□□□□ -1.2
RN7SL561P-201ENST00000488553 INPP5BP32019 993 aa7.56□□□□□ -1.2
RN7SL561P-201ENST00000488553 PBX1P40424 430 aa7.56□□□□□ -1.2
RN7SL561P-201ENST00000488553 PPP1R2P41236 205 aa7.56□□□□□ -1.2
RN7SL561P-201ENST00000488553 RASSF7Q02833 373 aa7.56□□□□□ -1.2
RN7SL561P-201ENST00000488553 STK4Q13043 487 aa7.56□□□□□ -1.2
RN7SL561P-201ENST00000488553 PAK1Q13153 545 aa7.56□□□□□ -1.2
RN7SL561P-201ENST00000488553 MCM6Q14566 821 aa7.56□□□□□ -1.2
RN7SL561P-201ENST00000488553 ECM1Q16610 540 aa7.56□□□□□ -1.2
RN7SL561P-201ENST00000488553 USH1GQ495M9 461 aa7.56□□□□□ -1.2
RN7SL561P-201ENST00000488553 HSP90AA4PQ58FG1 418 aa7.56□□□□□ -1.2
RN7SL561P-201ENST00000488553 IRF2BP1Q8IU81 584 aa7.56□□□□□ -1.2
RN7SL561P-201ENST00000488553 ETNPPLQ8TBG4 499 aa7.56□□□□□ -1.2
RN7SL561P-201ENST00000488553 SNX29Q8TEQ0 813 aa7.56□□□□□ -1.2
RN7SL561P-201ENST00000488553 TBC1D5Q92609 795 aa7.56□□□□□ -1.2
RN7SL561P-201ENST00000488553 UPF1Q92900 1129 aaKnown RBP eCLIP7.56□□□□□ -1.2
RN7SL561P-201ENST00000488553 CCDC47Q96A33 483 aaKnown RBP7.56□□□□□ -1.2
RN7SL561P-201ENST00000488553 KIFC2Q96AC6 838 aa7.56□□□□□ -1.2
RN7SL561P-201ENST00000488553 LENG9Q96B70 501 aa7.56□□□□□ -1.2
RN7SL561P-201ENST00000488553 FAM20AQ96MK3 541 aa7.56□□□□□ -1.2
RN7SL561P-201ENST00000488553 CTAGE1Q96RT6 745 aa7.56□□□□□ -1.2
RN7SL561P-201ENST00000488553 LRRC27Q9C0I9 530 aa7.56□□□□□ -1.2
RN7SL561P-201ENST00000488553 KIAA1683Q9H0B3 1180 aa7.56□□□□□ -1.2
RN7SL561P-201ENST00000488553 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.56□□□□□ -1.2
RN7SL561P-201ENST00000488553 HACL1Q9UJ83 578 aa7.56□□□□□ -1.2
RN7SL561P-201ENST00000488553 ZNF112Q9UJU3 913 aa7.56□□□□□ -1.2
RN7SL561P-201ENST00000488553 CTNND2Q9UQB3 1225 aa7.56□□□□□ -1.2
RN7SL561P-201ENST00000488553 GDAQ9Y2T3 454 aa7.56□□□□□ -1.2
RN7SL561P-201ENST00000488553 MRPL11Q9Y3B7 192 aaKnown RBP7.56□□□□□ -1.2
RN7SL561P-201ENST00000488553 ASTN2O75129 1339 aaPredicted RBP7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 POTEMA6NI47 508 aa7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 FAM86B1E9PN63 330 aa7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 GCOM1H8Y6P7 765 aaPredicted RBP7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 TEX33O43247 280 aa7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 FAM86B2P0C5J1 330 aa7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 POLR2MP0CAP2 368 aa7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 TAL1P17542 331 aaPredicted RBP7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 SFPQP23246 707 aaKnown RBP eCLIP7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 HOXA13P31271 388 aaPredicted RBP7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 CCT6AP40227 531 aaKnown RBP7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 KCNJ6P48051 423 aa7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 SPAG1Q07617 926 aa7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 EHHADHQ08426 723 aa7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 PDE4DQ08499 809 aa7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 SPIRE1Q08AE8 756 aa7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 PSMD2Q13200 908 aa7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 STIM1Q13586 685 aa7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 TPD52L1Q16890 204 aaPredicted RBP7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 TBC1D10BQ4KMP7 808 aaPredicted RBP7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 PRR16Q569H4 304 aa7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 TCP11X2Q5H9J9 407 aa7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 NBPF12Q5TAG4 269 aaPredicted RBP7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 SPECC1LQ69YQ0 1117 aa7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 TTI2Q6NXR4 508 aa7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 CCDC174Q6PII3 467 aa7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 UNC13DQ70J99 1090 aa7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 KCNK18Q7Z418 384 aa7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 LDHDQ86WU2 507 aa7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 PRPF38AQ8NAV1 312 aaKnown RBP7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 NLGN2Q8NFZ4 835 aa7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 NOC3LQ8WTT2 800 aaKnown RBP7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 LARP4BQ92615 738 aaKnown RBP7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 LPAR1Q92633 364 aa7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 GJA10Q969M2 543 aa7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 CDK5RAP3Q96JB5 506 aa7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 DUSP9Q99956 384 aaKnown RBP7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 ZNF341Q9BYN7 854 aa7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 NT5C3AQ9H0P0 336 aa7.55□□□□□ -1.2
RN7SL561P-201ENST00000488553 THAP9Q9H5L6 903 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms