RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 LTBP2Q14767 1821 aa16.45■□□□□ 0.22
COL9A2-208ENST00000488463 MOXD2PA6NHM9 499 aa16.45■□□□□ 0.22
COL9A2-208ENST00000488463 ARIH2O95376 493 aa16.45■□□□□ 0.22
COL9A2-208ENST00000488463 C6orf222P0C671 652 aaPredicted RBP16.45■□□□□ 0.22
COL9A2-208ENST00000488463 RPS6KB1P23443 525 aa16.45■□□□□ 0.22
COL9A2-208ENST00000488463 CCDC62Q6P9F0 684 aa16.45■□□□□ 0.22
COL9A2-208ENST00000488463 TLK2Q86UE8 772 aa16.45■□□□□ 0.22
COL9A2-208ENST00000488463 PIBF1Q8WXW3 757 aa16.45■□□□□ 0.22
COL9A2-208ENST00000488463 IWS1Q96ST2 819 aa16.45■□□□□ 0.22
COL9A2-208ENST00000488463 GDF15Q99988 308 aa16.45■□□□□ 0.22
COL9A2-208ENST00000488463 PXMP2Q9NR77 195 aa16.45■□□□□ 0.22
COL9A2-208ENST00000488463 NID2Q14112 1375 aa16.44■□□□□ 0.22
COL9A2-208ENST00000488463 ASGR1P07306 291 aa16.44■□□□□ 0.22
COL9A2-208ENST00000488463 HOXA13P31271 388 aaPredicted RBP16.44■□□□□ 0.22
COL9A2-208ENST00000488463 RCAN1P53805 252 aa16.44■□□□□ 0.22
COL9A2-208ENST00000488463 BEX3Q00994 111 aa16.44■□□□□ 0.22
COL9A2-208ENST00000488463 PDE4DQ08499 809 aa16.44■□□□□ 0.22
COL9A2-208ENST00000488463 TRAF1Q13077 416 aa16.44■□□□□ 0.22
COL9A2-208ENST00000488463 TRIM60Q495X7 471 aa16.44■□□□□ 0.22
COL9A2-208ENST00000488463 CHRDL2Q6WN34 429 aa16.44■□□□□ 0.22
COL9A2-208ENST00000488463 Q6ZUG5 572 aa16.44■□□□□ 0.22
COL9A2-208ENST00000488463 RRP36Q96EU6 259 aaKnown RBP16.44■□□□□ 0.22
COL9A2-208ENST00000488463 WDR11Q9BZH6 1224 aa16.44■□□□□ 0.22
COL9A2-208ENST00000488463 FRMPD4Q14CM0 1322 aa16.44■□□□□ 0.22
COL9A2-208ENST00000488463 CNTNAP5Q8WYK1 1306 aa16.44■□□□□ 0.22
COL9A2-208ENST00000488463 KLF18A0A0U1RQI7 1052 aa16.43■□□□□ 0.22
COL9A2-208ENST00000488463 hCG_1642624A0A1W2PR95 340 aa16.43■□□□□ 0.22
COL9A2-208ENST00000488463 DYNC1LI2O43237 492 aaPredicted RBP16.43■□□□□ 0.22
COL9A2-208ENST00000488463 ZBTB43O43298 467 aa16.43■□□□□ 0.22
COL9A2-208ENST00000488463 RGS20O76081 388 aa16.43■□□□□ 0.22
COL9A2-208ENST00000488463 NR3C2P08235 984 aa16.43■□□□□ 0.22
COL9A2-208ENST00000488463 SYN1P17600 705 aa16.43■□□□□ 0.22
COL9A2-208ENST00000488463 EIF2AK2P19525 551 aaKnown RBP16.43■□□□□ 0.22
COL9A2-208ENST00000488463 CDC27P30260 824 aa16.43■□□□□ 0.22
COL9A2-208ENST00000488463 CDK7P50613 346 aa16.43■□□□□ 0.22
COL9A2-208ENST00000488463 FSCN1Q16658 493 aaKnown RBP16.43■□□□□ 0.22
COL9A2-208ENST00000488463 GNASQ5JWF2 1037 aa16.43■□□□□ 0.22
COL9A2-208ENST00000488463 BLOC1S2Q6QNY1 142 aa16.43■□□□□ 0.22
COL9A2-208ENST00000488463 PCSK9Q8NBP7 692 aaKnown RBP16.43■□□□□ 0.22
COL9A2-208ENST00000488463 IL31RAQ8NI17 732 aa16.43■□□□□ 0.22
COL9A2-208ENST00000488463 PDCD2LQ9BRP1 358 aa16.43■□□□□ 0.22
COL9A2-208ENST00000488463 ZSWIM6Q9HCJ5 1215 aa16.43■□□□□ 0.22
COL9A2-208ENST00000488463 RBM27Q9P2N5 1060 aaKnown RBP16.43■□□□□ 0.22
COL9A2-208ENST00000488463 ELP1O95163 1332 aa16.43■□□□□ 0.22
COL9A2-208ENST00000488463 GCOM1H8Y6P7 765 aaPredicted RBP16.42■□□□□ 0.22
COL9A2-208ENST00000488463 MEIS2O14770 477 aa16.42■□□□□ 0.22
COL9A2-208ENST00000488463 POLR2MP0CAP2 368 aa16.42■□□□□ 0.22
COL9A2-208ENST00000488463 CASTP20810 708 aaKnown RBP16.42■□□□□ 0.22
COL9A2-208ENST00000488463 EVCP57679 992 aa16.42■□□□□ 0.22
COL9A2-208ENST00000488463 TLE2Q04725 743 aa16.42■□□□□ 0.22
COL9A2-208ENST00000488463 APOBRQ0VD83 1088 aa16.42■□□□□ 0.22
COL9A2-208ENST00000488463 VSIG10LQ86VR7 867 aa16.42■□□□□ 0.22
COL9A2-208ENST00000488463 CCDC82Q8N4S0 544 aa16.42■□□□□ 0.22
COL9A2-208ENST00000488463 SCFD2Q8WU76 684 aa16.42■□□□□ 0.22
COL9A2-208ENST00000488463 COPS5Q92905 334 aa16.42■□□□□ 0.22
COL9A2-208ENST00000488463 SPC25Q9HBM1 224 aa16.42■□□□□ 0.22
COL9A2-208ENST00000488463 RBM28Q9NW13 759 aaKnown RBP16.42■□□□□ 0.22
COL9A2-208ENST00000488463 ATP11BQ9Y2G3 1177 aa16.42■□□□□ 0.22
COL9A2-208ENST00000488463 SCN10AQ9Y5Y9 1956 aa16.42■□□□□ 0.22
COL9A2-208ENST00000488463 GRIN2DO15399 1336 aa16.42■□□□□ 0.22
COL9A2-208ENST00000488463 B4DLN1 442 aa16.41■□□□□ 0.22
COL9A2-208ENST00000488463 PIK3CDO00329 1044 aa16.41■□□□□ 0.22
COL9A2-208ENST00000488463 MAGEA10P43363 369 aaPredicted RBP16.41■□□□□ 0.22
COL9A2-208ENST00000488463 MRPL12P52815 198 aaKnown RBP16.41■□□□□ 0.22
COL9A2-208ENST00000488463 STXBP2Q15833 593 aa16.41■□□□□ 0.22
COL9A2-208ENST00000488463 RTN1Q16799 776 aa16.41■□□□□ 0.22
COL9A2-208ENST00000488463 ARHGEF16Q5VV41 709 aa16.41■□□□□ 0.22
COL9A2-208ENST00000488463 TYW1BQ6NUM6 668 aa16.41■□□□□ 0.22
COL9A2-208ENST00000488463 NOL8Q76FK4 1167 aaKnown RBP16.41■□□□□ 0.22
COL9A2-208ENST00000488463 ANKRD33Q7Z3H0 272 aa16.41■□□□□ 0.22
COL9A2-208ENST00000488463 SLC43A3Q8NBI5 491 aa16.41■□□□□ 0.22
COL9A2-208ENST00000488463 BRF1Q92994 677 aa16.41■□□□□ 0.22
COL9A2-208ENST00000488463 MPHOSPH6Q99547 160 aaKnown RBP16.41■□□□□ 0.22
COL9A2-208ENST00000488463 TM6SF1Q9BZW5 370 aa16.41■□□□□ 0.22
COL9A2-208ENST00000488463 STARD7Q9NQZ5 370 aa16.41■□□□□ 0.22
COL9A2-208ENST00000488463 PDLIM7Q9NR12 457 aa16.41■□□□□ 0.22
COL9A2-208ENST00000488463 TRIM43BA6NCK2 446 aa16.4■□□□□ 0.22
COL9A2-208ENST00000488463 GOLGA8AA7E2F4 631 aa16.4■□□□□ 0.22
COL9A2-208ENST00000488463 GOLGA8BA8MQT2 603 aa16.4■□□□□ 0.22
COL9A2-208ENST00000488463 NKRFO15226 690 aaKnown RBP eCLIP16.4■□□□□ 0.22
COL9A2-208ENST00000488463 EIF3JO75822 258 aaKnown RBP16.4■□□□□ 0.22
COL9A2-208ENST00000488463 PSMA5P28066 241 aa16.4■□□□□ 0.22
COL9A2-208ENST00000488463 BMP8BP34820 402 aa16.4■□□□□ 0.22
COL9A2-208ENST00000488463 ADD1P35611 737 aaKnown RBP16.4■□□□□ 0.22
COL9A2-208ENST00000488463 TOB2Q14106 344 aaPredicted RBP16.4■□□□□ 0.22
COL9A2-208ENST00000488463 PGM5Q15124 567 aa16.4■□□□□ 0.22
COL9A2-208ENST00000488463 PPP2R5BQ15173 497 aa16.4■□□□□ 0.22
COL9A2-208ENST00000488463 USP17L6PQ6QN14 398 aa16.4■□□□□ 0.22
COL9A2-208ENST00000488463 CXCL17Q6UXB2 119 aa16.4■□□□□ 0.22
COL9A2-208ENST00000488463 SYNE3Q6ZMZ3 975 aa16.4■□□□□ 0.22
COL9A2-208ENST00000488463 RUFY3Q7L099 469 aa16.4■□□□□ 0.22
COL9A2-208ENST00000488463 SH3RF1Q7Z6J0 888 aa16.4■□□□□ 0.22
COL9A2-208ENST00000488463 TRIM43Q96BQ3 446 aaPredicted RBP16.4■□□□□ 0.22
COL9A2-208ENST00000488463 IL17RAQ96F46 866 aa16.4■□□□□ 0.22
COL9A2-208ENST00000488463 AP5M1Q9H0R1 490 aa16.4■□□□□ 0.22
COL9A2-208ENST00000488463 SEC63Q9UGP8 760 aaKnown RBP16.4■□□□□ 0.22
COL9A2-208ENST00000488463 MYH7BA7E2Y1 1941 aa16.4■□□□□ 0.22
COL9A2-208ENST00000488463 A6NJR5 290 aa16.39■□□□□ 0.21
COL9A2-208ENST00000488463 TXNP10599 105 aaKnown RBP16.39■□□□□ 0.21
COL9A2-208ENST00000488463 ITGB8P26012 769 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms