RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 TOX2Q96NM4 488 aa7.37□□□□□ -1.23
VPS8-224ENST00000488255 IRF2BPLQ9H1B7 796 aa7.37□□□□□ -1.23
VPS8-224ENST00000488255 SIT1Q9Y3P8 196 aa7.37□□□□□ -1.23
VPS8-224ENST00000488255 PCDHA2Q9Y5H9 948 aa7.37□□□□□ -1.23
VPS8-224ENST00000488255 IRAK3Q9Y616 596 aa7.37□□□□□ -1.23
VPS8-224ENST00000488255 C22orf46C9J442 243 aa7.36□□□□□ -1.23
VPS8-224ENST00000488255 NUAK1O60285 661 aa7.36□□□□□ -1.23
VPS8-224ENST00000488255 SCG5P05408 212 aa7.36□□□□□ -1.23
VPS8-224ENST00000488255 FPR2P25090 351 aa7.36□□□□□ -1.23
VPS8-224ENST00000488255 CFPP27918 469 aa7.36□□□□□ -1.23
VPS8-224ENST00000488255 RPL11P62913 178 aaKnown RBP7.36□□□□□ -1.23
VPS8-224ENST00000488255 JAG1P78504 1218 aa7.36□□□□□ -1.23
VPS8-224ENST00000488255 SF3A1Q15459 793 aaKnown RBP7.36□□□□□ -1.23
VPS8-224ENST00000488255 E4F1Q66K89 784 aaPredicted RBP7.36□□□□□ -1.23
VPS8-224ENST00000488255 WWC2Q6AWC2 1192 aa7.36□□□□□ -1.23
VPS8-224ENST00000488255 USP53Q70EK8 1073 aa7.36□□□□□ -1.23
VPS8-224ENST00000488255 CEP68Q76N32 757 aa7.36□□□□□ -1.23
VPS8-224ENST00000488255 ST13P5Q8NFI4 369 aaPredicted RBP7.36□□□□□ -1.23
VPS8-224ENST00000488255 MZB1Q8WU39 189 aa7.36□□□□□ -1.23
VPS8-224ENST00000488255 DNAJC2Q99543 621 aaKnown RBP7.36□□□□□ -1.23
VPS8-224ENST00000488255 AARSD1Q9BTE6 412 aaKnown RBP7.36□□□□□ -1.23
VPS8-224ENST00000488255 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.36□□□□□ -1.23
VPS8-224ENST00000488255 TIMM13Q9Y5L4 95 aaPredicted RBP7.36□□□□□ -1.23
VPS8-224ENST00000488255 N4BP3O15049 544 aa7.35□□□□□ -1.23
VPS8-224ENST00000488255 MYO1BO43795 1136 aa7.35□□□□□ -1.23
VPS8-224ENST00000488255 PI3P19957 117 aa7.35□□□□□ -1.23
VPS8-224ENST00000488255 KCNAB2Q13303 367 aa7.35□□□□□ -1.23
VPS8-224ENST00000488255 YOD1Q5VVQ6 348 aaPredicted RBP7.35□□□□□ -1.23
VPS8-224ENST00000488255 CIAPIN1Q6FI81 312 aa7.35□□□□□ -1.23
VPS8-224ENST00000488255 RCBTB1Q8NDN9 531 aa7.35□□□□□ -1.23
VPS8-224ENST00000488255 PLEKHO2Q8TD55 490 aa7.35□□□□□ -1.23
VPS8-224ENST00000488255 PANK1Q8TE04 598 aa7.35□□□□□ -1.23
VPS8-224ENST00000488255 ALG3Q92685 438 aa7.35□□□□□ -1.23
VPS8-224ENST00000488255 TRMT2BQ96GJ1 504 aaKnown RBP7.35□□□□□ -1.23
VPS8-224ENST00000488255 SGSM3Q96HU1 749 aa7.35□□□□□ -1.23
VPS8-224ENST00000488255 ARHGEF4Q9NR80 690 aa7.35□□□□□ -1.23
VPS8-224ENST00000488255 SIRPGQ9P1W8 387 aa7.35□□□□□ -1.23
VPS8-224ENST00000488255 FBXL7Q9UJT9 491 aa7.35□□□□□ -1.23
VPS8-224ENST00000488255 KCTD3Q9Y597 815 aa7.35□□□□□ -1.23
VPS8-224ENST00000488255 BLACEA4D250 179 aa7.34□□□□□ -1.23
VPS8-224ENST00000488255 DLX3O60479 287 aa7.34□□□□□ -1.23
VPS8-224ENST00000488255 BUB1BO60566 1050 aaPredicted RBP7.34□□□□□ -1.23
VPS8-224ENST00000488255 LTBRP36941 435 aa7.34□□□□□ -1.23
VPS8-224ENST00000488255 SSRP1Q08945 709 aaKnown RBP7.34□□□□□ -1.23
VPS8-224ENST00000488255 FZD5Q13467 585 aa7.34□□□□□ -1.23
VPS8-224ENST00000488255 SLC35F1Q5T1Q4 408 aa7.34□□□□□ -1.23
VPS8-224ENST00000488255 NBPF6Q5VWK0 638 aa7.34□□□□□ -1.23
VPS8-224ENST00000488255 NSMFQ6X4W1 530 aa7.34□□□□□ -1.23
VPS8-224ENST00000488255 LRRC47Q8N1G4 583 aaKnown RBP7.34□□□□□ -1.23
VPS8-224ENST00000488255 ZSCAN18Q8TBC5 510 aaPredicted RBP7.34□□□□□ -1.23
VPS8-224ENST00000488255 C1orf159Q96HA4 380 aa7.34□□□□□ -1.23
VPS8-224ENST00000488255 TMEM169Q96HH4 297 aa7.34□□□□□ -1.23
VPS8-224ENST00000488255 SIGLEC10Q96LC7 697 aa7.34□□□□□ -1.23
VPS8-224ENST00000488255 NBPF4Q96M43 638 aa7.34□□□□□ -1.23
VPS8-224ENST00000488255 SPATA9Q9BWV2 254 aa7.34□□□□□ -1.23
VPS8-224ENST00000488255 NUDT5Q9UKK9 219 aa7.34□□□□□ -1.23
VPS8-224ENST00000488255 MSRB2Q9Y3D2 182 aa7.34□□□□□ -1.23
VPS8-224ENST00000488255 TRAV20A0A0B4J274 112 aa7.33□□□□□ -1.24
VPS8-224ENST00000488255 PABPC1P11940 636 aaKnown RBP7.33□□□□□ -1.24
VPS8-224ENST00000488255 LIMS1P48059 325 aa7.33□□□□□ -1.24
VPS8-224ENST00000488255 RBL2Q08999 1139 aa7.33□□□□□ -1.24
VPS8-224ENST00000488255 ACBD5Q5T8D3 534 aaPredicted RBP7.33□□□□□ -1.24
VPS8-224ENST00000488255 KRTAP1-3Q8IUG1 177 aa7.33□□□□□ -1.24
VPS8-224ENST00000488255 CILP2Q8IUL8 1156 aa7.33□□□□□ -1.24
VPS8-224ENST00000488255 IGDCC3Q8IVU1 814 aa7.33□□□□□ -1.24
VPS8-224ENST00000488255 NETO2Q8NC67 525 aa7.33□□□□□ -1.24
VPS8-224ENST00000488255 SREK1Q8WXA9 508 aaKnown RBP7.33□□□□□ -1.24
VPS8-224ENST00000488255 PEX11GQ96HA9 241 aa7.33□□□□□ -1.24
VPS8-224ENST00000488255 CCDC113Q9H0I3 377 aa7.33□□□□□ -1.24
VPS8-224ENST00000488255 PCDHA5Q9Y5H7 936 aa7.33□□□□□ -1.24
VPS8-224ENST00000488255 FAM221BA6H8Z2 402 aa7.32□□□□□ -1.24
VPS8-224ENST00000488255 DIAPH1O60610 1272 aaKnown RBP7.32□□□□□ -1.24
VPS8-224ENST00000488255 CAPNS1P04632 268 aa7.32□□□□□ -1.24
VPS8-224ENST00000488255 PFKLP17858 780 aa7.32□□□□□ -1.24
VPS8-224ENST00000488255 MAP4K2Q12851 820 aa7.32□□□□□ -1.24
VPS8-224ENST00000488255 RASGRF1Q13972 1273 aa7.32□□□□□ -1.24
VPS8-224ENST00000488255 ZNF385BQ569K4 471 aa7.32□□□□□ -1.24
VPS8-224ENST00000488255 NLRP10Q86W26 655 aa7.32□□□□□ -1.24
VPS8-224ENST00000488255 ARMC5Q96C12 935 aa7.32□□□□□ -1.24
VPS8-224ENST00000488255 DEPDC7Q96QD5 511 aa7.32□□□□□ -1.24
VPS8-224ENST00000488255 SRPK1Q96SB4 655 aaKnown RBP7.32□□□□□ -1.24
VPS8-224ENST00000488255 CDC6Q99741 560 aa7.32□□□□□ -1.24
VPS8-224ENST00000488255 CLDND1Q9NY35 253 aa7.32□□□□□ -1.24
VPS8-224ENST00000488255 RFXAPO00287 272 aa7.31□□□□□ -1.24
VPS8-224ENST00000488255 ZSCAN22P10073 491 aaPredicted RBP7.31□□□□□ -1.24
VPS8-224ENST00000488255 MC3RP41968 323 aa7.31□□□□□ -1.24
VPS8-224ENST00000488255 GTF2A2P52657 109 aa7.31□□□□□ -1.24
VPS8-224ENST00000488255 IFRD2Q12894 506 aaPredicted RBP7.31□□□□□ -1.24
VPS8-224ENST00000488255 KCNT2Q6UVM3 1135 aa7.31□□□□□ -1.24
VPS8-224ENST00000488255 OSBP2Q969R2 916 aa7.31□□□□□ -1.24
VPS8-224ENST00000488255 PHF20Q9BVI0 1012 aa7.31□□□□□ -1.24
VPS8-224ENST00000488255 FAN1Q9Y2M0 1017 aa7.31□□□□□ -1.24
VPS8-224ENST00000488255 COA3Q9Y2R0 106 aaPredicted RBP7.31□□□□□ -1.24
VPS8-224ENST00000488255 KDM2BQ8NHM5 1336 aa7.3□□□□□ -1.24
VPS8-224ENST00000488255 MSCO60682 206 aa7.3□□□□□ -1.24
VPS8-224ENST00000488255 ASGR2P07307 311 aa7.3□□□□□ -1.24
VPS8-224ENST00000488255 FGFR1P11362 822 aa7.3□□□□□ -1.24
VPS8-224ENST00000488255 PMLP29590 882 aa7.3□□□□□ -1.24
VPS8-224ENST00000488255 LSAMPQ13449 338 aa7.3□□□□□ -1.24
VPS8-224ENST00000488255 SERINC3Q13530 473 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms