RNA–Protein interactions for RNA: ENST00000488185.2

PKD1-221, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-221ENST00000488185 NEK1Q96PY6 1258 aa23.73■■□□□ 1.39
PKD1-221ENST00000488185 RMDN3Q96TC7 470 aa23.73■■□□□ 1.39
PKD1-221ENST00000488185 LBHD1Q9BQE6 289 aaPredicted RBP23.73■■□□□ 1.39
PKD1-221ENST00000488185 MROH7Q68CQ1 1323 aa23.73■■□□□ 1.39
PKD1-221ENST00000488185 ARVCFO00192 962 aa23.72■■□□□ 1.39
PKD1-221ENST00000488185 EPB41L2O43491 1005 aaKnown RBP23.72■■□□□ 1.39
PKD1-221ENST00000488185 CLTBP09497 229 aa23.72■■□□□ 1.39
PKD1-221ENST00000488185 LRIT3Q3SXY7 679 aa23.72■■□□□ 1.39
PKD1-221ENST00000488185 TMEM63BQ5T3F8 832 aa23.72■■□□□ 1.39
PKD1-221ENST00000488185 TDHQ8IZJ6 230 aa23.72■■□□□ 1.39
PKD1-221ENST00000488185 UBE2OQ9C0C9 1292 aaKnown RBP23.72■■□□□ 1.39
PKD1-221ENST00000488185 LAMA3Q16787 3333 aa23.72■■□□□ 1.39
PKD1-221ENST00000488185 A0A0U1RQG5 324 aaPredicted RBP23.71■■□□□ 1.39
PKD1-221ENST00000488185 TRIM43BA6NCK2 446 aa23.71■■□□□ 1.39
PKD1-221ENST00000488185 CCDC69A6NI79 296 aa23.71■■□□□ 1.39
PKD1-221ENST00000488185 DCDC2CA8MYV0 355 aa23.71■■□□□ 1.39
PKD1-221ENST00000488185 FAAP100Q0VG06 881 aa23.71■■□□□ 1.39
PKD1-221ENST00000488185 CCDC62Q6P9F0 684 aa23.71■■□□□ 1.39
PKD1-221ENST00000488185 DHX32Q7L7V1 743 aaKnown RBP23.71■■□□□ 1.39
PKD1-221ENST00000488185 RASEFQ8IZ41 740 aa23.71■■□□□ 1.39
PKD1-221ENST00000488185 TRIM43Q96BQ3 446 aaPredicted RBP23.71■■□□□ 1.39
PKD1-221ENST00000488185 EIF3JO75822 258 aaKnown RBP23.7■■□□□ 1.38
PKD1-221ENST00000488185 CFBP00751 764 aa23.7■■□□□ 1.38
PKD1-221ENST00000488185 HMGB1P09429 215 aaKnown RBP23.7■■□□□ 1.38
PKD1-221ENST00000488185 BEX3Q00994 111 aa23.7■■□□□ 1.38
PKD1-221ENST00000488185 STXBP2Q15833 593 aa23.7■■□□□ 1.38
PKD1-221ENST00000488185 NFXL1Q6ZNB6 911 aa23.7■■□□□ 1.38
PKD1-221ENST00000488185 HOMER1Q86YM7 354 aa23.7■■□□□ 1.38
PKD1-221ENST00000488185 PXMP2Q9NR77 195 aa23.7■■□□□ 1.38
PKD1-221ENST00000488185 SLC12A7Q9Y666 1083 aa23.7■■□□□ 1.38
PKD1-221ENST00000488185 PQBP1O60828 265 aaKnown RBP23.69■■□□□ 1.38
PKD1-221ENST00000488185 CPT1AP50416 773 aa23.69■■□□□ 1.38
PKD1-221ENST00000488185 MDM2Q00987 491 aaPredicted RBP23.69■■□□□ 1.38
PKD1-221ENST00000488185 TTLL4Q14679 1199 aa23.69■■□□□ 1.38
PKD1-221ENST00000488185 PPP2R5BQ15173 497 aa23.69■■□□□ 1.38
PKD1-221ENST00000488185 SH3RF1Q7Z6J0 888 aa23.69■■□□□ 1.38
PKD1-221ENST00000488185 A6NJR5 290 aa23.68■■□□□ 1.38
PKD1-221ENST00000488185 KPNA6O60684 536 aa23.68■■□□□ 1.38
PKD1-221ENST00000488185 NR3C2P08235 984 aa23.68■■□□□ 1.38
PKD1-221ENST00000488185 HSPA4P34932 840 aa23.68■■□□□ 1.38
PKD1-221ENST00000488185 ARHGEF16Q5VV41 709 aa23.68■■□□□ 1.38
PKD1-221ENST00000488185 GPR153Q6NV75 609 aa23.68■■□□□ 1.38
PKD1-221ENST00000488185 CXCL17Q6UXB2 119 aa23.68■■□□□ 1.38
PKD1-221ENST00000488185 FANCBQ8NB91 859 aa23.68■■□□□ 1.38
PKD1-221ENST00000488185 RRP36Q96EU6 259 aaKnown RBP23.68■■□□□ 1.38
PKD1-221ENST00000488185 MYL10Q9BUA6 226 aa23.68■■□□□ 1.38
PKD1-221ENST00000488185 POLR3EQ9NVU0 708 aa23.68■■□□□ 1.38
PKD1-221ENST00000488185 TBX21Q9UL17 535 aa23.68■■□□□ 1.38
PKD1-221ENST00000488185 GCOM1H8Y6P7 765 aaPredicted RBP23.67■■□□□ 1.38
PKD1-221ENST00000488185 REC8O95072 547 aa23.67■■□□□ 1.38
PKD1-221ENST00000488185 POLR2MP0CAP2 368 aa23.67■■□□□ 1.38
PKD1-221ENST00000488185 TXNP10599 105 aaKnown RBP23.67■■□□□ 1.38
PKD1-221ENST00000488185 PTGS1P23219 599 aa23.67■■□□□ 1.38
PKD1-221ENST00000488185 RCAN1P53805 252 aa23.67■■□□□ 1.38
PKD1-221ENST00000488185 ADCK5Q3MIX3 580 aa23.67■■□□□ 1.38
PKD1-221ENST00000488185 VSIG10LQ86VR7 867 aa23.67■■□□□ 1.38
PKD1-221ENST00000488185 FAM126BQ8IXS8 530 aa23.67■■□□□ 1.38
PKD1-221ENST00000488185 SRBD1Q8N5C6 995 aaKnown RBP23.67■■□□□ 1.38
PKD1-221ENST00000488185 PDCD2LQ9BRP1 358 aa23.67■■□□□ 1.38
PKD1-221ENST00000488185 PRDM5Q9NQX1 630 aaPredicted RBP23.67■■□□□ 1.38
PKD1-221ENST00000488185 LTBP2Q14767 1821 aa23.67■■□□□ 1.38
PKD1-221ENST00000488185 MYH6P13533 1939 aa23.67■■□□□ 1.38
PKD1-221ENST00000488185 GRIN2DO15399 1336 aa23.66■■□□□ 1.38
PKD1-221ENST00000488185 PIK3CDO00329 1044 aa23.66■■□□□ 1.38
PKD1-221ENST00000488185 CD4P01730 458 aa23.66■■□□□ 1.38
PKD1-221ENST00000488185 BRDTQ58F21 947 aaPredicted RBP23.66■■□□□ 1.38
PKD1-221ENST00000488185 FBXL16Q8N461 479 aa23.66■■□□□ 1.38
PKD1-221ENST00000488185 VTI1AQ96AJ9 217 aa23.66■■□□□ 1.38
PKD1-221ENST00000488185 TMEM39AQ9NV64 488 aa23.66■■□□□ 1.38
PKD1-221ENST00000488185 FRMPD4Q14CM0 1322 aa23.65■■□□□ 1.38
PKD1-221ENST00000488185 ARIH2O95376 493 aa23.65■■□□□ 1.38
PKD1-221ENST00000488185 ITGB8P26012 769 aa23.65■■□□□ 1.38
PKD1-221ENST00000488185 PURAQ00577 322 aaKnown RBP23.65■■□□□ 1.38
PKD1-221ENST00000488185 ITGA7Q13683 1181 aa23.65■■□□□ 1.38
PKD1-221ENST00000488185 APOA5Q6Q788 366 aa23.65■■□□□ 1.38
PKD1-221ENST00000488185 SYNE3Q6ZMZ3 975 aa23.65■■□□□ 1.38
PKD1-221ENST00000488185 TMTC3Q6ZXV5 915 aa23.65■■□□□ 1.38
PKD1-221ENST00000488185 TEX2Q8IWB9 1127 aa23.65■■□□□ 1.38
PKD1-221ENST00000488185 OR6J1Q8NGC5 347 aa23.65■■□□□ 1.38
PKD1-221ENST00000488185 BADQ92934 168 aa23.65■■□□□ 1.38
PKD1-221ENST00000488185 EMID1Q96A84 441 aaPredicted RBP23.65■■□□□ 1.38
PKD1-221ENST00000488185 LRRC2Q9BYS8 371 aa23.65■■□□□ 1.38
PKD1-221ENST00000488185 SZT2Q5T011 3432 aa23.65■■□□□ 1.38
PKD1-221ENST00000488185 PLEKHA8P1O95397 391 aa23.64■■□□□ 1.37
PKD1-221ENST00000488185 EIF2AK2P19525 551 aaKnown RBP23.64■■□□□ 1.37
PKD1-221ENST00000488185 KCNV1Q6PIU1 500 aa23.64■■□□□ 1.37
PKD1-221ENST00000488185 SEC63Q9UGP8 760 aaKnown RBP23.64■■□□□ 1.37
PKD1-221ENST00000488185 DDX41Q9UJV9 622 aaKnown RBP23.64■■□□□ 1.37
PKD1-221ENST00000488185 TLR3O15455 904 aaKnown RBP23.63■■□□□ 1.37
PKD1-221ENST00000488185 TIMP1P01033 207 aa23.63■■□□□ 1.37
PKD1-221ENST00000488185 TGFB3P10600 412 aa23.63■■□□□ 1.37
PKD1-221ENST00000488185 RAG1P15918 1043 aa23.63■■□□□ 1.37
PKD1-221ENST00000488185 HOXA13P31271 388 aaPredicted RBP23.63■■□□□ 1.37
PKD1-221ENST00000488185 PGM5Q15124 567 aa23.63■■□□□ 1.37
PKD1-221ENST00000488185 MTG1Q9BT17 334 aaPredicted RBP23.63■■□□□ 1.37
PKD1-221ENST00000488185 RBM28Q9NW13 759 aaKnown RBP23.63■■□□□ 1.37
PKD1-221ENST00000488185 BAZ2BQ9UIF8 2168 aaKnown RBP23.62■■□□□ 1.37
PKD1-221ENST00000488185 SOX1O00570 391 aaPredicted RBP23.62■■□□□ 1.37
PKD1-221ENST00000488185 STAM2O75886 525 aa23.62■■□□□ 1.37
PKD1-221ENST00000488185 RGS20O76081 388 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms