RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 ZKSCAN4Q969J2 545 aaPredicted RBP15.73■□□□□ 0.11
COL16A1-214ENST00000488128 HYOU1Q9Y4L1 999 aa15.73■□□□□ 0.11
COL16A1-214ENST00000488128 LRP6O75581 1613 aa15.72■□□□□ 0.11
COL16A1-214ENST00000488128 LRRC53A6NM62 1247 aa15.72■□□□□ 0.11
COL16A1-214ENST00000488128 PDHBP11177 359 aa15.72■□□□□ 0.11
COL16A1-214ENST00000488128 TMOD1P28289 359 aa15.72■□□□□ 0.11
COL16A1-214ENST00000488128 RDXP35241 583 aaKnown RBP15.72■□□□□ 0.11
COL16A1-214ENST00000488128 PSEN1P49768 467 aa15.72■□□□□ 0.11
COL16A1-214ENST00000488128 HLTFQ14527 1009 aaKnown RBP eCLIP15.72■□□□□ 0.11
COL16A1-214ENST00000488128 EMBQ6PCB8 327 aa15.72■□□□□ 0.11
COL16A1-214ENST00000488128 DTHD1Q6ZMT9 781 aa15.72■□□□□ 0.11
COL16A1-214ENST00000488128 TMTC3Q6ZXV5 915 aa15.72■□□□□ 0.11
COL16A1-214ENST00000488128 IQCA1Q86XH1 822 aa15.72■□□□□ 0.11
COL16A1-214ENST00000488128 CCDC13Q8IYE1 715 aa15.72■□□□□ 0.11
COL16A1-214ENST00000488128 THAP9Q9H5L6 903 aa15.72■□□□□ 0.11
COL16A1-214ENST00000488128 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.72■□□□□ 0.11
COL16A1-214ENST00000488128 BCL9LQ86UU0 1499 aa15.72■□□□□ 0.11
COL16A1-214ENST00000488128 LOC102724428A0A0B4J2F2 783 aa15.72■□□□□ 0.11
COL16A1-214ENST00000488128 SCG2P13521 617 aa15.72■□□□□ 0.11
COL16A1-214ENST00000488128 SIK1P57059 783 aa15.72■□□□□ 0.11
COL16A1-214ENST00000488128 NLRP14Q86W24 1093 aa15.72■□□□□ 0.11
COL16A1-214ENST00000488128 DDX42Q86XP3 938 aaKnown RBP eCLIP15.72■□□□□ 0.11
COL16A1-214ENST00000488128 GIMAP7Q8NHV1 300 aa15.72■□□□□ 0.11
COL16A1-214ENST00000488128 SCLT1Q96NL6 688 aa15.72■□□□□ 0.11
COL16A1-214ENST00000488128 EPN3Q9H201 632 aa15.72■□□□□ 0.11
COL16A1-214ENST00000488128 ITGB4P16144 1822 aa15.71■□□□□ 0.11
COL16A1-214ENST00000488128 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.71■□□□□ 0.11
COL16A1-214ENST00000488128 RTL9Q8NET4 1388 aa15.71■□□□□ 0.11
COL16A1-214ENST00000488128 CNTNAP5Q8WYK1 1306 aa15.71■□□□□ 0.11
COL16A1-214ENST00000488128 PPP1R37O75864 691 aa15.71■□□□□ 0.11
COL16A1-214ENST00000488128 CAMTA2O94983 1202 aa15.71■□□□□ 0.11
COL16A1-214ENST00000488128 IGHMBP2P38935 993 aaKnown RBP15.71■□□□□ 0.11
COL16A1-214ENST00000488128 SKOR1P84550 965 aa15.71■□□□□ 0.11
COL16A1-214ENST00000488128 ALS2CLQ60I27 953 aa15.71■□□□□ 0.11
COL16A1-214ENST00000488128 CHADLQ6NUI6 762 aa15.71■□□□□ 0.11
COL16A1-214ENST00000488128 MYCBPAPQ8TBZ2 947 aa15.71■□□□□ 0.11
COL16A1-214ENST00000488128 ALS2CR12Q96Q35 445 aa15.71■□□□□ 0.11
COL16A1-214ENST00000488128 KLC4Q9NSK0 619 aa15.71■□□□□ 0.11
COL16A1-214ENST00000488128 USP17L12C9JPN9 530 aa15.71■□□□□ 0.11
COL16A1-214ENST00000488128 USP17L21D6R901 530 aa15.71■□□□□ 0.11
COL16A1-214ENST00000488128 CHRNDQ07001 517 aa15.71■□□□□ 0.11
COL16A1-214ENST00000488128 PTGISQ16647 500 aa15.71■□□□□ 0.11
COL16A1-214ENST00000488128 CCDC40Q4G0X9 1142 aa15.71■□□□□ 0.11
COL16A1-214ENST00000488128 IQCKQ8N0W5 287 aa15.71■□□□□ 0.11
COL16A1-214ENST00000488128 MARCH10Q8NA82 808 aaPredicted RBP15.71■□□□□ 0.11
COL16A1-214ENST00000488128 GIMAP8Q8ND71 665 aaPredicted RBP15.71■□□□□ 0.11
COL16A1-214ENST00000488128 PIK3R5Q8WYR1 880 aa15.71■□□□□ 0.11
COL16A1-214ENST00000488128 P2RX5Q93086 422 aa15.71■□□□□ 0.11
COL16A1-214ENST00000488128 TANGO6Q9C0B7 1094 aa15.71■□□□□ 0.11
COL16A1-214ENST00000488128 CPVLQ9H3G5 476 aa15.71■□□□□ 0.11
COL16A1-214ENST00000488128 CHD4Q14839 1912 aa15.71■□□□□ 0.1
COL16A1-214ENST00000488128 MAGEB6P1A0A0J9YX57 407 aa15.7■□□□□ 0.1
COL16A1-214ENST00000488128 KCNQ2O43526 872 aa15.7■□□□□ 0.1
COL16A1-214ENST00000488128 GYG1P46976 350 aa15.7■□□□□ 0.1
COL16A1-214ENST00000488128 CCDC152Q4G0S7 254 aa15.7■□□□□ 0.1
COL16A1-214ENST00000488128 BICDL1Q6ZP65 573 aa15.7■□□□□ 0.1
COL16A1-214ENST00000488128 BANK1Q8NDB2 785 aa15.7■□□□□ 0.1
COL16A1-214ENST00000488128 CCDC114Q96M63 670 aa15.7■□□□□ 0.1
COL16A1-214ENST00000488128 JAG2Q9Y219 1238 aa15.7■□□□□ 0.1
COL16A1-214ENST00000488128 TCP1P17987 556 aaKnown RBP15.7■□□□□ 0.1
COL16A1-214ENST00000488128 PLCG1P19174 1290 aa15.7■□□□□ 0.1
COL16A1-214ENST00000488128 EHHADHQ08426 723 aa15.7■□□□□ 0.1
COL16A1-214ENST00000488128 C4orf32Q8N8J7 132 aa15.7■□□□□ 0.1
COL16A1-214ENST00000488128 CASKIN2Q8WXE0 1202 aa15.7■□□□□ 0.1
COL16A1-214ENST00000488128 PLAAQ9Y263 795 aa15.7■□□□□ 0.1
COL16A1-214ENST00000488128 KLHDC7AQ5VTJ3 777 aa15.69■□□□□ 0.1
COL16A1-214ENST00000488128 C3orf67Q6ZVT6 689 aa15.69■□□□□ 0.1
COL16A1-214ENST00000488128 DYMQ7RTS9 669 aa15.69■□□□□ 0.1
COL16A1-214ENST00000488128 IFT20Q8IY31 132 aa15.69■□□□□ 0.1
COL16A1-214ENST00000488128 N4BP2L2Q92802 583 aaPredicted RBP15.69■□□□□ 0.1
COL16A1-214ENST00000488128 PLAGL2Q9UPG8 496 aa15.69■□□□□ 0.1
COL16A1-214ENST00000488128 CEP83Q9Y592 693 aa15.69■□□□□ 0.1
COL16A1-214ENST00000488128 CYP2D6P10635 497 aa15.69■□□□□ 0.1
COL16A1-214ENST00000488128 LONP1P36776 959 aaKnown RBP15.69■□□□□ 0.1
COL16A1-214ENST00000488128 QPCTQ16769 361 aa15.69■□□□□ 0.1
COL16A1-214ENST00000488128 ODF2Q5BJF6 829 aa15.69■□□□□ 0.1
COL16A1-214ENST00000488128 STAG2Q8N3U4 1231 aa15.69■□□□□ 0.1
COL16A1-214ENST00000488128 NUP58Q9BVL2 599 aa15.69■□□□□ 0.1
COL16A1-214ENST00000488128 TSGA10Q9BZW7 698 aa15.69■□□□□ 0.1
COL16A1-214ENST00000488128 NID2Q14112 1375 aa15.69■□□□□ 0.1
COL16A1-214ENST00000488128 CCDC194A0A1B0GVG4 234 aa15.69■□□□□ 0.1
COL16A1-214ENST00000488128 OPLAHO14841 1288 aa15.69■□□□□ 0.1
COL16A1-214ENST00000488128 PALMO75781 387 aa15.69■□□□□ 0.1
COL16A1-214ENST00000488128 FSBPO95073 299 aa15.69■□□□□ 0.1
COL16A1-214ENST00000488128 NTSR2O95665 410 aa15.69■□□□□ 0.1
COL16A1-214ENST00000488128 EPB41P11171 864 aaKnown RBP15.69■□□□□ 0.1
COL16A1-214ENST00000488128 GNAT2P19087 354 aa15.69■□□□□ 0.1
COL16A1-214ENST00000488128 MDH1P40925 334 aaKnown RBP15.69■□□□□ 0.1
COL16A1-214ENST00000488128 LRRC41Q15345 812 aa15.69■□□□□ 0.1
COL16A1-214ENST00000488128 CACNA2D4Q7Z3S7 1137 aa15.69■□□□□ 0.1
COL16A1-214ENST00000488128 UIMC1Q96RL1 719 aa15.69■□□□□ 0.1
COL16A1-214ENST00000488128 SLC40A1Q9NP59 571 aa15.69■□□□□ 0.1
COL16A1-214ENST00000488128 RHOBTB3O94955 611 aa15.68■□□□□ 0.1
COL16A1-214ENST00000488128 RPSAP08865 295 aaKnown RBP15.68■□□□□ 0.1
COL16A1-214ENST00000488128 CFAP221Q4G0U5 840 aa15.68■□□□□ 0.1
COL16A1-214ENST00000488128 BLIDQ8IZY5 108 aa15.68■□□□□ 0.1
COL16A1-214ENST00000488128 GLIS3Q8NEA6 775 aa15.68■□□□□ 0.1
COL16A1-214ENST00000488128 SEMA6BQ9H3T3 888 aa15.68■□□□□ 0.1
COL16A1-214ENST00000488128 HAUS2Q9NVX0 235 aa15.68■□□□□ 0.1
COL16A1-214ENST00000488128 GOLGA6L7A0A1B0GV03 622 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms