RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 USP35Q9P2H5 1018 aa5.82□□□□□ -1.48
HMGB1P36-201ENST00000487709 PPP1R1BQ9UD71 204 aaPredicted RBP5.82□□□□□ -1.48
HMGB1P36-201ENST00000487709 C1QTNF3-AMACRE9PGA6 284 aa5.81□□□□□ -1.48
HMGB1P36-201ENST00000487709 SMARCA5O60264 1052 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P36-201ENST00000487709 ATP2B1P20020 1258 aa5.81□□□□□ -1.48
HMGB1P36-201ENST00000487709 LZTR1Q8N653 840 aa5.81□□□□□ -1.48
HMGB1P36-201ENST00000487709 TTC9BQ8N6N2 239 aa5.81□□□□□ -1.48
HMGB1P36-201ENST00000487709 NLGN2Q8NFZ4 835 aa5.81□□□□□ -1.48
HMGB1P36-201ENST00000487709 DRC1Q96MC2 740 aa5.81□□□□□ -1.48
HMGB1P36-201ENST00000487709 SORCS2Q96PQ0 1159 aa5.81□□□□□ -1.48
HMGB1P36-201ENST00000487709 ST6GALNAC2Q9UJ37 374 aa5.81□□□□□ -1.48
HMGB1P36-201ENST00000487709 NUDT5Q9UKK9 219 aa5.81□□□□□ -1.48
HMGB1P36-201ENST00000487709 SF3B6Q9Y3B4 125 aaKnown RBP5.81□□□□□ -1.48
HMGB1P36-201ENST00000487709 ZNF451Q9Y4E5 1061 aa5.81□□□□□ -1.48
HMGB1P36-201ENST00000487709 OVOL3O00110 214 aa5.8□□□□□ -1.48
HMGB1P36-201ENST00000487709 ITGA4P13612 1032 aa5.8□□□□□ -1.48
HMGB1P36-201ENST00000487709 CD247P20963 164 aa5.8□□□□□ -1.48
HMGB1P36-201ENST00000487709 HMGA2P52926 109 aa5.8□□□□□ -1.48
HMGB1P36-201ENST00000487709 POU4F1Q01851 419 aa5.8□□□□□ -1.48
HMGB1P36-201ENST00000487709 CACNB2Q08289 660 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P36-201ENST00000487709 PPP2R5DQ14738 602 aa5.8□□□□□ -1.48
HMGB1P36-201ENST00000487709 RGL3Q3MIN7 710 aa5.8□□□□□ -1.48
HMGB1P36-201ENST00000487709 FBXW10Q5XX13 1052 aa5.8□□□□□ -1.48
HMGB1P36-201ENST00000487709 SLITRK4Q8IW52 837 aa5.8□□□□□ -1.48
HMGB1P36-201ENST00000487709 SMARCC1Q92922 1105 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P36-201ENST00000487709 PEX11GQ96HA9 241 aa5.8□□□□□ -1.48
HMGB1P36-201ENST00000487709 C1QTNF3Q9BXJ4 246 aa5.8□□□□□ -1.48
HMGB1P36-201ENST00000487709 EFR3BQ9Y2G0 817 aa5.8□□□□□ -1.48
HMGB1P36-201ENST00000487709 R3HCC1Q9Y3T6 440 aaKnown RBP5.8□□□□□ -1.48
HMGB1P36-201ENST00000487709 ZNF536O15090 1300 aa5.79□□□□□ -1.48
HMGB1P36-201ENST00000487709 GDF5P43026 501 aa5.79□□□□□ -1.48
HMGB1P36-201ENST00000487709 INTS3Q68E01 1043 aaKnown RBP5.79□□□□□ -1.48
HMGB1P36-201ENST00000487709 SPRED1Q7Z699 444 aa5.79□□□□□ -1.48
HMGB1P36-201ENST00000487709 SH3RF3Q8TEJ3 882 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P36-201ENST00000487709 CPA5Q8WXQ8 436 aa5.79□□□□□ -1.48
HMGB1P36-201ENST00000487709 ARMC5Q96C12 935 aa5.79□□□□□ -1.48
HMGB1P36-201ENST00000487709 SYT3Q9BQG1 590 aa5.79□□□□□ -1.48
HMGB1P36-201ENST00000487709 INVSQ9Y283 1065 aa5.79□□□□□ -1.48
HMGB1P36-201ENST00000487709 STXBP3O00186 592 aa5.78□□□□□ -1.48
HMGB1P36-201ENST00000487709 STK10O94804 968 aaKnown RBP5.78□□□□□ -1.48
HMGB1P36-201ENST00000487709 C8BP07358 591 aa5.78□□□□□ -1.48
HMGB1P36-201ENST00000487709 CYP2C8P10632 490 aa5.78□□□□□ -1.48
HMGB1P36-201ENST00000487709 ATF4P18848 351 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P36-201ENST00000487709 TACR2P21452 398 aa5.78□□□□□ -1.48
HMGB1P36-201ENST00000487709 NASPP49321 788 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P36-201ENST00000487709 SLC9A5Q14940 896 aa5.78□□□□□ -1.48
HMGB1P36-201ENST00000487709 ZYXQ15942 572 aaKnown RBP5.78□□□□□ -1.48
HMGB1P36-201ENST00000487709 ANKRD39Q53RE8 183 aa5.78□□□□□ -1.48
HMGB1P36-201ENST00000487709 ZFPM1Q8IX07 1006 aa5.78□□□□□ -1.48
HMGB1P36-201ENST00000487709 NETO2Q8NC67 525 aa5.78□□□□□ -1.48
HMGB1P36-201ENST00000487709 ADCY4Q8NFM4 1077 aa5.78□□□□□ -1.48
HMGB1P36-201ENST00000487709 OR6P1Q8NGX9 317 aa5.78□□□□□ -1.48
HMGB1P36-201ENST00000487709 UBXN4Q92575 508 aa5.78□□□□□ -1.48
HMGB1P36-201ENST00000487709 DVL3Q92997 716 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P36-201ENST00000487709 GORASP1Q9BQQ3 440 aa5.78□□□□□ -1.48
HMGB1P36-201ENST00000487709 HIRIP3Q9BW71 556 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P36-201ENST00000487709 GULP1Q9UBP9 304 aa5.78□□□□□ -1.48
HMGB1P36-201ENST00000487709 SIT1Q9Y3P8 196 aa5.78□□□□□ -1.48
HMGB1P36-201ENST00000487709 SOX9P48436 509 aa5.77□□□□□ -1.49
HMGB1P36-201ENST00000487709 EIF6P56537 245 aaKnown RBP5.77□□□□□ -1.49
HMGB1P36-201ENST00000487709 TNNI3KQ59H18 835 aa5.77□□□□□ -1.49
HMGB1P36-201ENST00000487709 SOGA3Q5TF21 947 aa5.77□□□□□ -1.49
HMGB1P36-201ENST00000487709 EEF1DP3Q658K8 133 aa5.77□□□□□ -1.49
HMGB1P36-201ENST00000487709 WWC2Q6AWC2 1192 aa5.77□□□□□ -1.49
HMGB1P36-201ENST00000487709 LIMS2Q7Z4I7 341 aa5.77□□□□□ -1.49
HMGB1P36-201ENST00000487709 CPNE8Q86YQ8 564 aa5.77□□□□□ -1.49
HMGB1P36-201ENST00000487709 LGI4Q8N135 537 aa5.77□□□□□ -1.49
HMGB1P36-201ENST00000487709 USP33Q8TEY7 942 aa5.77□□□□□ -1.49
HMGB1P36-201ENST00000487709 GMLQ99445 158 aa5.77□□□□□ -1.49
HMGB1P36-201ENST00000487709 MCMBPQ9BTE3 642 aa5.77□□□□□ -1.49
HMGB1P36-201ENST00000487709 MRIQ9BWK5 157 aa5.77□□□□□ -1.49
HMGB1P36-201ENST00000487709 ZNRF3Q9ULT6 936 aa5.77□□□□□ -1.49
HMGB1P36-201ENST00000487709 PPP1R11O60927 126 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P36-201ENST00000487709 SLPIP03973 132 aa5.76□□□□□ -1.49
HMGB1P36-201ENST00000487709 THBS2P35442 1172 aa5.76□□□□□ -1.49
HMGB1P36-201ENST00000487709 KIAA2012Q0VF49 1180 aa5.76□□□□□ -1.49
HMGB1P36-201ENST00000487709 DPY19L1Q2PZI1 675 aa5.76□□□□□ -1.49
HMGB1P36-201ENST00000487709 MCTP2Q6DN12 878 aa5.76□□□□□ -1.49
HMGB1P36-201ENST00000487709 RCSD1Q6JBY9 416 aa5.76□□□□□ -1.49
HMGB1P36-201ENST00000487709 BORAQ6PGQ7 559 aa5.76□□□□□ -1.49
HMGB1P36-201ENST00000487709 GLB1LQ6UWU2 654 aa5.76□□□□□ -1.49
HMGB1P36-201ENST00000487709 STK32CQ86UX6 486 aa5.76□□□□□ -1.49
HMGB1P36-201ENST00000487709 CKAP2LQ8IYA6 745 aa5.76□□□□□ -1.49
HMGB1P36-201ENST00000487709 LINC00482Q8N8I6 264 aa5.76□□□□□ -1.49
HMGB1P36-201ENST00000487709 KISS1RQ969F8 398 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P36-201ENST00000487709 GINM1Q9NU53 330 aa5.76□□□□□ -1.49
HMGB1P36-201ENST00000487709 MROH6A6NGR9 719 aa5.75□□□□□ -1.49
HMGB1P36-201ENST00000487709 AURKAO14965 403 aa5.75□□□□□ -1.49
HMGB1P36-201ENST00000487709 U2SURPO15042 1029 aaKnown RBP5.75□□□□□ -1.49
HMGB1P36-201ENST00000487709 CBFA2T2O43439 604 aa5.75□□□□□ -1.49
HMGB1P36-201ENST00000487709 ZBTB7AO95365 584 aa5.75□□□□□ -1.49
HMGB1P36-201ENST00000487709 RPL13P26373 211 aaKnown RBP5.75□□□□□ -1.49
HMGB1P36-201ENST00000487709 GTF2F1P35269 517 aaKnown RBP eCLIP5.75□□□□□ -1.49
HMGB1P36-201ENST00000487709 UNC5AQ6ZN44 842 aa5.75□□□□□ -1.49
HMGB1P36-201ENST00000487709 RUFY4Q6ZNE9 571 aa5.75□□□□□ -1.49
HMGB1P36-201ENST00000487709 FAM124AQ86V42 546 aa5.75□□□□□ -1.49
HMGB1P36-201ENST00000487709 Q8N1X5 172 aa5.75□□□□□ -1.49
HMGB1P36-201ENST00000487709 TAB3Q8N5C8 712 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P36-201ENST00000487709 TM9SF2Q99805 663 aa5.75□□□□□ -1.49
HMGB1P36-201ENST00000487709 MTA3Q9BTC8 594 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms