RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 ADAMTS5Q9UNA0 930 aa10.67□□□□□ -0.7
SF3B1-211ENST00000487698 VWA5AO00534 786 aa10.66□□□□□ -0.7
SF3B1-211ENST00000487698 CFBP00751 764 aa10.66□□□□□ -0.7
SF3B1-211ENST00000487698 BMP6P22004 513 aa10.66□□□□□ -0.7
SF3B1-211ENST00000487698 UBA7P41226 1012 aa10.66□□□□□ -0.7
SF3B1-211ENST00000487698 TECP42680 631 aa10.66□□□□□ -0.7
SF3B1-211ENST00000487698 TXKP42681 527 aa10.66□□□□□ -0.7
SF3B1-211ENST00000487698 DPYDQ12882 1025 aa10.66□□□□□ -0.7
SF3B1-211ENST00000487698 PDIA5Q14554 519 aa10.66□□□□□ -0.7
SF3B1-211ENST00000487698 ZRSR1Q15695 479 aaKnown RBP10.66□□□□□ -0.7
SF3B1-211ENST00000487698 DHX40Q8IX18 779 aaKnown RBP10.66□□□□□ -0.7
SF3B1-211ENST00000487698 REPS2Q8NFH8 660 aa10.66□□□□□ -0.7
SF3B1-211ENST00000487698 RBM46Q8TBY0 533 aaKnown RBP10.66□□□□□ -0.7
SF3B1-211ENST00000487698 LRRC15Q8TF66 581 aa10.66□□□□□ -0.7
SF3B1-211ENST00000487698 CLEC4DQ8WXI8 215 aa10.66□□□□□ -0.7
SF3B1-211ENST00000487698 MTRQ99707 1265 aa10.66□□□□□ -0.7
SF3B1-211ENST00000487698 MAN1B1Q9UKM7 699 aa10.66□□□□□ -0.7
SF3B1-211ENST00000487698 PNMA2Q9UL42 364 aa10.66□□□□□ -0.7
SF3B1-211ENST00000487698 FAM86B1E9PN63 330 aa10.66□□□□□ -0.7
SF3B1-211ENST00000487698 AP5Z1O43299 807 aa10.66□□□□□ -0.7
SF3B1-211ENST00000487698 FAM86B2P0C5J1 330 aa10.66□□□□□ -0.7
SF3B1-211ENST00000487698 STAT6P42226 847 aa10.66□□□□□ -0.7
SF3B1-211ENST00000487698 IREB2P48200 963 aaKnown RBP10.66□□□□□ -0.7
SF3B1-211ENST00000487698 MORC3Q14149 939 aa10.66□□□□□ -0.7
SF3B1-211ENST00000487698 TMEM266Q2M3C6 531 aa10.66□□□□□ -0.7
SF3B1-211ENST00000487698 CABP7Q86V35 215 aa10.66□□□□□ -0.7
SF3B1-211ENST00000487698 TRIML1Q8N9V2 468 aa10.66□□□□□ -0.7
SF3B1-211ENST00000487698 ETNPPLQ8TBG4 499 aa10.66□□□□□ -0.7
SF3B1-211ENST00000487698 SMARCE1Q969G3 411 aa10.66□□□□□ -0.7
SF3B1-211ENST00000487698 ATG4CQ96DT6 458 aa10.66□□□□□ -0.7
SF3B1-211ENST00000487698 WNK4Q96J92 1243 aa10.66□□□□□ -0.7
SF3B1-211ENST00000487698 NAT10Q9H0A0 1025 aaKnown RBP10.66□□□□□ -0.7
SF3B1-211ENST00000487698 TTC12Q9H892 705 aaPredicted RBP10.66□□□□□ -0.7
SF3B1-211ENST00000487698 CSADQ9Y600 493 aa10.66□□□□□ -0.7
SF3B1-211ENST00000487698 LCTP09848 1927 aa10.65□□□□□ -0.7
SF3B1-211ENST00000487698 MYPNQ86TC9 1320 aa10.65□□□□□ -0.7
SF3B1-211ENST00000487698 IGLV3-22A0A075B6J6 115 aa10.65□□□□□ -0.7
SF3B1-211ENST00000487698 NFIBO00712 420 aa10.65□□□□□ -0.7
SF3B1-211ENST00000487698 TBX3O15119 743 aa10.65□□□□□ -0.7
SF3B1-211ENST00000487698 DSG3P32926 999 aa10.65□□□□□ -0.7
SF3B1-211ENST00000487698 AFMP43652 599 aa10.65□□□□□ -0.7
SF3B1-211ENST00000487698 CATSPERGQ6ZRH7 1159 aa10.65□□□□□ -0.7
SF3B1-211ENST00000487698 PNMA8AQ86V59 439 aaPredicted RBP10.65□□□□□ -0.7
SF3B1-211ENST00000487698 FCHSD1Q86WN1 690 aa10.65□□□□□ -0.7
SF3B1-211ENST00000487698 RAB34Q9BZG1 259 aa10.65□□□□□ -0.7
SF3B1-211ENST00000487698 CUEDC2Q9H467 287 aa10.65□□□□□ -0.7
SF3B1-211ENST00000487698 RAVER2Q9HCJ3 691 aaKnown RBP10.65□□□□□ -0.7
SF3B1-211ENST00000487698 TMOD4Q9NZQ9 345 aa10.65□□□□□ -0.7
SF3B1-211ENST00000487698 LRWD1Q9UFC0 647 aa10.65□□□□□ -0.7
SF3B1-211ENST00000487698 CCDC39Q9UFE4 941 aa10.65□□□□□ -0.7
SF3B1-211ENST00000487698 RPTORQ8N122 1335 aa10.65□□□□□ -0.71
SF3B1-211ENST00000487698 POTEMA6NI47 508 aa10.64□□□□□ -0.71
SF3B1-211ENST00000487698 GTPBP6O43824 516 aaPredicted RBP10.64□□□□□ -0.71
SF3B1-211ENST00000487698 ZBED4O75132 1171 aa10.64□□□□□ -0.71
SF3B1-211ENST00000487698 SMC2O95347 1197 aa10.64□□□□□ -0.71
SF3B1-211ENST00000487698 PLCG1P19174 1290 aa10.64□□□□□ -0.71
SF3B1-211ENST00000487698 NF2P35240 595 aa10.64□□□□□ -0.71
SF3B1-211ENST00000487698 OAZ1P54368 228 aa10.64□□□□□ -0.71
SF3B1-211ENST00000487698 RRAGBQ5VZM2 374 aa10.64□□□□□ -0.71
SF3B1-211ENST00000487698 SLFN12Q8IYM2 578 aa10.64□□□□□ -0.71
SF3B1-211ENST00000487698 CPXCR1Q8N123 301 aa10.64□□□□□ -0.71
SF3B1-211ENST00000487698 SAMD3Q8N6K7 520 aa10.64□□□□□ -0.71
SF3B1-211ENST00000487698 CNKSR2Q8WXI2 1034 aa10.64□□□□□ -0.71
SF3B1-211ENST00000487698 GSDMAQ96QA5 445 aa10.64□□□□□ -0.71
SF3B1-211ENST00000487698 MAGEF1Q9HAY2 307 aa10.64□□□□□ -0.71
SF3B1-211ENST00000487698 KBTBD4Q9NVX7 518 aa10.64□□□□□ -0.71
SF3B1-211ENST00000487698 MAP3K20Q9NYL2 800 aaKnown RBP10.64□□□□□ -0.71
SF3B1-211ENST00000487698 FRMPD4Q14CM0 1322 aa10.64□□□□□ -0.71
SF3B1-211ENST00000487698 ATP2A1O14983 1001 aa10.64□□□□□ -0.71
SF3B1-211ENST00000487698 ALAS1P13196 640 aa10.64□□□□□ -0.71
SF3B1-211ENST00000487698 CASP1P29466 404 aa10.64□□□□□ -0.71
SF3B1-211ENST00000487698 PPATQ06203 517 aa10.64□□□□□ -0.71
SF3B1-211ENST00000487698 SPIRE1Q08AE8 756 aa10.64□□□□□ -0.71
SF3B1-211ENST00000487698 GRB10Q13322 594 aa10.64□□□□□ -0.71
SF3B1-211ENST00000487698 COG2Q14746 738 aa10.64□□□□□ -0.71
SF3B1-211ENST00000487698 PRR16Q569H4 304 aa10.64□□□□□ -0.71
SF3B1-211ENST00000487698 EAPPQ56P03 285 aaPredicted RBP10.64□□□□□ -0.71
SF3B1-211ENST00000487698 MUM1L1Q5H9M0 696 aa10.64□□□□□ -0.71
SF3B1-211ENST00000487698 ISM2Q6H9L7 571 aa10.64□□□□□ -0.71
SF3B1-211ENST00000487698 MCF2L2Q86YR7 1114 aa10.64□□□□□ -0.71
SF3B1-211ENST00000487698 ANKRD13AQ8IZ07 590 aa10.64□□□□□ -0.71
SF3B1-211ENST00000487698 AOPEPQ8N6M6 819 aa10.64□□□□□ -0.71
SF3B1-211ENST00000487698 GJA10Q969M2 543 aa10.64□□□□□ -0.71
SF3B1-211ENST00000487698 CLMNQ96JQ2 1002 aa10.64□□□□□ -0.71
SF3B1-211ENST00000487698 COL20A1Q9P218 1284 aa10.64□□□□□ -0.71
SF3B1-211ENST00000487698 ZNF214Q9UL59 606 aaPredicted RBP10.64□□□□□ -0.71
SF3B1-211ENST00000487698 PCDHA12Q9UN75 941 aa10.64□□□□□ -0.71
SF3B1-211ENST00000487698 SPDYE5A6NIY4 337 aa10.63□□□□□ -0.71
SF3B1-211ENST00000487698 SPDYE16A6NNV3 312 aaPredicted RBP10.63□□□□□ -0.71
SF3B1-211ENST00000487698 MYL1P05976 194 aa10.63□□□□□ -0.71
SF3B1-211ENST00000487698 MOB2Q70IA6 237 aa10.63□□□□□ -0.71
SF3B1-211ENST00000487698 ERO1BQ86YB8 467 aa10.63□□□□□ -0.71
SF3B1-211ENST00000487698 RASSF8Q8NHQ8 419 aa10.63□□□□□ -0.71
SF3B1-211ENST00000487698 STAMQ92783 540 aa10.63□□□□□ -0.71
SF3B1-211ENST00000487698 PNMA5Q96PV4 448 aa10.63□□□□□ -0.71
SF3B1-211ENST00000487698 EHMT1Q9H9B1 1298 aa10.63□□□□□ -0.71
SF3B1-211ENST00000487698 ELP3Q9H9T3 547 aa10.63□□□□□ -0.71
SF3B1-211ENST00000487698 A0A0G2JLL6 359 aaPredicted RBP10.63□□□□□ -0.71
SF3B1-211ENST00000487698 IKBKBO14920 756 aa10.63□□□□□ -0.71
SF3B1-211ENST00000487698 MSH4O15457 936 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms