RNA–Protein interactions for RNA: ENST00000487596.1

RAD50-207, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 3

Gene RAD50, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-207ENST00000487596 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.23□□□□□ -1.25
RAD50-207ENST00000487596 PCDHB10Q9UN67 800 aa7.23□□□□□ -1.25
RAD50-207ENST00000487596 NPHP3-ACAD11A0A0J9YXS1 232 aa7.22□□□□□ -1.25
RAD50-207ENST00000487596 OTOL1A6NHN0 477 aaPredicted RBP7.22□□□□□ -1.25
RAD50-207ENST00000487596 RAB33AQ14088 237 aa7.22□□□□□ -1.25
RAD50-207ENST00000487596 KIAA1211LQ6NV74 962 aa7.22□□□□□ -1.25
RAD50-207ENST00000487596 B3GNT8Q7Z7M8 397 aa7.22□□□□□ -1.25
RAD50-207ENST00000487596 HNRNPLLQ8WVV9 542 aaKnown RBP7.22□□□□□ -1.25
RAD50-207ENST00000487596 CPA5Q8WXQ8 436 aa7.22□□□□□ -1.25
RAD50-207ENST00000487596 MCMBPQ9BTE3 642 aa7.22□□□□□ -1.25
RAD50-207ENST00000487596 SUSD2Q9UGT4 822 aa7.22□□□□□ -1.25
RAD50-207ENST00000487596 AKT3Q9Y243 479 aa7.22□□□□□ -1.25
RAD50-207ENST00000487596 NPHS1O60500 1241 aa7.21□□□□□ -1.26
RAD50-207ENST00000487596 VAMP4O75379 141 aa7.21□□□□□ -1.26
RAD50-207ENST00000487596 BUD31P41223 144 aaPredicted RBP7.21□□□□□ -1.26
RAD50-207ENST00000487596 DPY19L1Q2PZI1 675 aa7.21□□□□□ -1.26
RAD50-207ENST00000487596 LARP1BQ659C4 914 aaKnown RBP7.21□□□□□ -1.26
RAD50-207ENST00000487596 FNIP1Q8TF40 1166 aa7.21□□□□□ -1.26
RAD50-207ENST00000487596 ALG3Q92685 438 aa7.21□□□□□ -1.26
RAD50-207ENST00000487596 TRIM55Q9BYV6 548 aa7.21□□□□□ -1.26
RAD50-207ENST00000487596 PCDH18Q9HCL0 1135 aa7.21□□□□□ -1.26
RAD50-207ENST00000487596 EMC9Q9Y3B6 208 aa7.21□□□□□ -1.26
RAD50-207ENST00000487596 PMF1-BGLAPU3KQ54 211 aa7.21□□□□□ -1.26
RAD50-207ENST00000487596 NOP56O00567 594 aaKnown RBP7.2□□□□□ -1.26
RAD50-207ENST00000487596 FFAR3O14843 346 aa7.2□□□□□ -1.26
RAD50-207ENST00000487596 U2SURPO15042 1029 aaKnown RBP7.2□□□□□ -1.26
RAD50-207ENST00000487596 ASGR2P07307 311 aa7.2□□□□□ -1.26
RAD50-207ENST00000487596 LIMS1P48059 325 aa7.2□□□□□ -1.26
RAD50-207ENST00000487596 KCNC1P48547 511 aa7.2□□□□□ -1.26
RAD50-207ENST00000487596 HTRA3P83110 453 aa7.2□□□□□ -1.26
RAD50-207ENST00000487596 VMACQ2NL98 169 aa7.2□□□□□ -1.26
RAD50-207ENST00000487596 SAPCD2Q86UD0 394 aa7.2□□□□□ -1.26
RAD50-207ENST00000487596 FAM178BQ8IXR5 827 aa7.2□□□□□ -1.26
RAD50-207ENST00000487596 TP53I13Q8NBR0 393 aaPredicted RBP7.2□□□□□ -1.26
RAD50-207ENST00000487596 BVESQ8NE79 360 aa7.2□□□□□ -1.26
RAD50-207ENST00000487596 FEZF2Q8TBJ5 459 aa7.2□□□□□ -1.26
RAD50-207ENST00000487596 COPS5Q92905 334 aa7.2□□□□□ -1.26
RAD50-207ENST00000487596 MMP19Q99542 508 aa7.2□□□□□ -1.26
RAD50-207ENST00000487596 MTA3Q9BTC8 594 aa7.2□□□□□ -1.26
RAD50-207ENST00000487596 ADAMTS20P59510 1910 aa7.19□□□□□ -1.26
RAD50-207ENST00000487596 SH3D21A4FU49 640 aa7.19□□□□□ -1.26
RAD50-207ENST00000487596 DDAH1O94760 285 aa7.19□□□□□ -1.26
RAD50-207ENST00000487596 ATF2P15336 505 aa7.19□□□□□ -1.26
RAD50-207ENST00000487596 DDR2Q16832 855 aa7.19□□□□□ -1.26
RAD50-207ENST00000487596 IQCEQ6IPM2 695 aa7.19□□□□□ -1.26
RAD50-207ENST00000487596 C6orf15Q6UXA7 325 aaPredicted RBP7.19□□□□□ -1.26
RAD50-207ENST00000487596 ZNF513Q8N8E2 541 aaPredicted RBP7.19□□□□□ -1.26
RAD50-207ENST00000487596 USP33Q8TEY7 942 aa7.19□□□□□ -1.26
RAD50-207ENST00000487596 SIRPGQ9P1W8 387 aa7.19□□□□□ -1.26
RAD50-207ENST00000487596 RWDD3Q9Y3V2 267 aa7.19□□□□□ -1.26
RAD50-207ENST00000487596 SLURP1P55000 103 aa7.18□□□□□ -1.26
RAD50-207ENST00000487596 VWA3BQ502W6 1294 aa7.18□□□□□ -1.26
RAD50-207ENST00000487596 LCE5AQ5TCM9 118 aa7.18□□□□□ -1.26
RAD50-207ENST00000487596 WWC2Q6AWC2 1192 aa7.18□□□□□ -1.26
RAD50-207ENST00000487596 LIPIQ6XZB0 460 aa7.18□□□□□ -1.26
RAD50-207ENST00000487596 CYP26B1Q9NR63 512 aa7.18□□□□□ -1.26
RAD50-207ENST00000487596 HCFC2Q9Y5Z7 792 aa7.18□□□□□ -1.26
RAD50-207ENST00000487596 C7orf72A4D263 438 aa7.17□□□□□ -1.26
RAD50-207ENST00000487596 KCNH1O95259 989 aa7.17□□□□□ -1.26
RAD50-207ENST00000487596 GJB6O95452 261 aa7.17□□□□□ -1.26
RAD50-207ENST00000487596 CELA3BP08861 270 aa7.17□□□□□ -1.26
RAD50-207ENST00000487596 CACNB2Q08289 660 aaPredicted RBP7.17□□□□□ -1.26
RAD50-207ENST00000487596 ZFYVE27Q5T4F4 411 aa7.17□□□□□ -1.26
RAD50-207ENST00000487596 DCP2Q8IU60 420 aaKnown RBP7.17□□□□□ -1.26
RAD50-207ENST00000487596 CELF2-AS1Q8N7Q2 184 aa7.17□□□□□ -1.26
RAD50-207ENST00000487596 EPN3Q9H201 632 aa7.17□□□□□ -1.26
RAD50-207ENST00000487596 CNOT11Q9UKZ1 510 aaKnown RBP7.17□□□□□ -1.26
RAD50-207ENST00000487596 PLA2G1BP04054 148 aaKnown RBP7.16□□□□□ -1.26
RAD50-207ENST00000487596 PMLP29590 882 aa7.16□□□□□ -1.26
RAD50-207ENST00000487596 EEPD1Q7L9B9 569 aa7.16□□□□□ -1.26
RAD50-207ENST00000487596 LRP10Q7Z4F1 713 aa7.16□□□□□ -1.26
RAD50-207ENST00000487596 CPNE8Q86YQ8 564 aa7.16□□□□□ -1.26
RAD50-207ENST00000487596 TRIM59Q8IWR1 403 aa7.16□□□□□ -1.26
RAD50-207ENST00000487596 ZDHHC14Q8IZN3 488 aa7.16□□□□□ -1.26
RAD50-207ENST00000487596 SYT8Q8NBV8 401 aa7.16□□□□□ -1.26
RAD50-207ENST00000487596 MICAL1Q8TDZ2 1067 aa7.16□□□□□ -1.26
RAD50-207ENST00000487596 MKL1Q969V6 931 aa7.16□□□□□ -1.26
RAD50-207ENST00000487596 GULP1Q9UBP9 304 aa7.16□□□□□ -1.26
RAD50-207ENST00000487596 APEX2Q9UBZ4 518 aa7.16□□□□□ -1.26
RAD50-207ENST00000487596 PPP1R11O60927 126 aaPredicted RBP7.15□□□□□ -1.26
RAD50-207ENST00000487596 SCRN1Q12765 414 aa7.15□□□□□ -1.26
RAD50-207ENST00000487596 SERINC3Q13530 473 aa7.15□□□□□ -1.26
RAD50-207ENST00000487596 E4F1Q66K89 784 aaPredicted RBP7.15□□□□□ -1.26
RAD50-207ENST00000487596 BORCS6Q96GS4 357 aa7.15□□□□□ -1.26
RAD50-207ENST00000487596 CCDC140Q96MF4 163 aa7.15□□□□□ -1.26
RAD50-207ENST00000487596 DNAJC2Q99543 621 aaKnown RBP7.15□□□□□ -1.26
RAD50-207ENST00000487596 CCDC113Q9H0I3 377 aa7.15□□□□□ -1.26
RAD50-207ENST00000487596 AP5M1Q9H0R1 490 aa7.15□□□□□ -1.26
RAD50-207ENST00000487596 ST7Q9NRC1 585 aa7.15□□□□□ -1.26
RAD50-207ENST00000487596 MSRB2Q9Y3D2 182 aa7.15□□□□□ -1.26
RAD50-207ENST00000487596 B2RBV5 119 aa7.14□□□□□ -1.27
RAD50-207ENST00000487596 PLS3P13797 630 aa7.14□□□□□ -1.27
RAD50-207ENST00000487596 GTF2A2P52657 109 aa7.14□□□□□ -1.27
RAD50-207ENST00000487596 GTF2IRD2BQ6EKJ0 949 aa7.14□□□□□ -1.27
RAD50-207ENST00000487596 GTF2IRD2Q86UP8 949 aa7.14□□□□□ -1.27
RAD50-207ENST00000487596 ST13P5Q8NFI4 369 aaPredicted RBP7.14□□□□□ -1.27
RAD50-207ENST00000487596 ZNF669Q96BR6 464 aaPredicted RBP7.14□□□□□ -1.27
RAD50-207ENST00000487596 MRGPRX3Q96LB0 322 aa7.14□□□□□ -1.27
RAD50-207ENST00000487596 KRTAP9-3Q9BYQ3 159 aa7.14□□□□□ -1.27
RAD50-207ENST00000487596 NKX2-4Q9H2Z4 354 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms