RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 COPS5Q92905 334 aa14.49□□□□□ -0.09
SREBF1-215ENST00000487401 IWS1Q96ST2 819 aa14.49□□□□□ -0.09
SREBF1-215ENST00000487401 ALDH8A1Q9H2A2 487 aaPredicted RBP14.49□□□□□ -0.09
SREBF1-215ENST00000487401 IL23AQ9NPF7 189 aa14.49□□□□□ -0.09
SREBF1-215ENST00000487401 MYH4Q9Y623 1939 aa14.49□□□□□ -0.09
SREBF1-215ENST00000487401 TMEM265A0A087WTH1 108 aa14.48□□□□□ -0.09
SREBF1-215ENST00000487401 PALM3A6NDB9 673 aaPredicted RBP14.48□□□□□ -0.09
SREBF1-215ENST00000487401 SGSM2O43147 1006 aa14.48□□□□□ -0.09
SREBF1-215ENST00000487401 CFBP00751 764 aa14.48□□□□□ -0.09
SREBF1-215ENST00000487401 FGBP02675 491 aa14.48□□□□□ -0.09
SREBF1-215ENST00000487401 CCL23P55773 120 aa14.48□□□□□ -0.09
SREBF1-215ENST00000487401 TRAF1Q13077 416 aa14.48□□□□□ -0.09
SREBF1-215ENST00000487401 WTAPQ15007 396 aa14.48□□□□□ -0.09
SREBF1-215ENST00000487401 FAM47CQ5HY64 1035 aa14.48□□□□□ -0.09
SREBF1-215ENST00000487401 SEPT14Q6ZU15 432 aa14.48□□□□□ -0.09
SREBF1-215ENST00000487401 RPUSD2Q8IZ73 545 aaKnown RBP14.48□□□□□ -0.09
SREBF1-215ENST00000487401 NCOA7Q8NI08 942 aa14.48□□□□□ -0.09
SREBF1-215ENST00000487401 NOC4LQ9BVI4 516 aaKnown RBP14.48□□□□□ -0.09
SREBF1-215ENST00000487401 MTIF3Q9H2K0 278 aaKnown RBP14.48□□□□□ -0.09
SREBF1-215ENST00000487401 TTYH1Q9H313 450 aaPredicted RBP14.48□□□□□ -0.09
SREBF1-215ENST00000487401 MAD2L2Q9UI95 211 aa14.48□□□□□ -0.09
SREBF1-215ENST00000487401 PCDHA1Q9Y5I3 950 aa14.48□□□□□ -0.09
SREBF1-215ENST00000487401 A6NJR5 290 aa14.47□□□□□ -0.09
SREBF1-215ENST00000487401 E7EWF7 191 aa14.47□□□□□ -0.09
SREBF1-215ENST00000487401 DLL1O00548 723 aa14.47□□□□□ -0.09
SREBF1-215ENST00000487401 ZBTB5O15062 677 aa14.47□□□□□ -0.09
SREBF1-215ENST00000487401 EIF3JO75822 258 aaKnown RBP14.47□□□□□ -0.09
SREBF1-215ENST00000487401 EIF2AK2P19525 551 aaKnown RBP14.47□□□□□ -0.09
SREBF1-215ENST00000487401 CHMP4BP1P59074 171 aa14.47□□□□□ -0.09
SREBF1-215ENST00000487401 NBPF20Q3BBV1 942 aa14.47□□□□□ -0.09
SREBF1-215ENST00000487401 CATIPQ7Z7H3 387 aa14.47□□□□□ -0.09
SREBF1-215ENST00000487401 TIFAQ96CG3 184 aa14.47□□□□□ -0.09
SREBF1-215ENST00000487401 TRMT13Q9NUP7 481 aaKnown RBP14.47□□□□□ -0.09
SREBF1-215ENST00000487401 COL20A1Q9P218 1284 aa14.47□□□□□ -0.09
SREBF1-215ENST00000487401 ARIH2O95376 493 aa14.46□□□□□ -0.09
SREBF1-215ENST00000487401 GH1P01241 217 aa14.46□□□□□ -0.09
SREBF1-215ENST00000487401 DNAJB2P25686 324 aa14.46□□□□□ -0.09
SREBF1-215ENST00000487401 GRM4Q14833 912 aa14.46□□□□□ -0.09
SREBF1-215ENST00000487401 LY6KQ17RY6 165 aa14.46□□□□□ -0.09
SREBF1-215ENST00000487401 TMEM67Q5HYA8 995 aa14.46□□□□□ -0.09
SREBF1-215ENST00000487401 CCDC62Q6P9F0 684 aa14.46□□□□□ -0.09
SREBF1-215ENST00000487401 CHST3Q7LGC8 479 aa14.46□□□□□ -0.09
SREBF1-215ENST00000487401 HOMER1Q86YM7 354 aa14.46□□□□□ -0.09
SREBF1-215ENST00000487401 MYLIPQ8WY64 445 aa14.46□□□□□ -0.09
SREBF1-215ENST00000487401 HERVK_113Q902F9 699 aa14.46□□□□□ -0.09
SREBF1-215ENST00000487401 MAP4K1Q92918 833 aa14.46□□□□□ -0.09
SREBF1-215ENST00000487401 ZNFX1Q9P2E3 1918 aaKnown RBP14.46□□□□□ -0.09
SREBF1-215ENST00000487401 UMODL1Q5DID0 1318 aa14.45□□□□□ -0.1
SREBF1-215ENST00000487401 SMCHD1A6NHR9 2005 aa14.45□□□□□ -0.1
SREBF1-215ENST00000487401 NR3C2P08235 984 aa14.45□□□□□ -0.1
SREBF1-215ENST00000487401 CYP2C9P11712 490 aa14.45□□□□□ -0.1
SREBF1-215ENST00000487401 FOSL2P15408 326 aa14.45□□□□□ -0.1
SREBF1-215ENST00000487401 PTPN11Q06124 597 aaPredicted RBP14.45□□□□□ -0.1
SREBF1-215ENST00000487401 RASIP1Q5U651 963 aa14.45□□□□□ -0.1
SREBF1-215ENST00000487401 NFRKBQ6P4R8 1299 aa14.45□□□□□ -0.1
SREBF1-215ENST00000487401 SAMD3Q8N6K7 520 aa14.45□□□□□ -0.1
SREBF1-215ENST00000487401 RETREG2Q8NC44 543 aa14.45□□□□□ -0.1
SREBF1-215ENST00000487401 AFG1LQ8WV93 481 aa14.45□□□□□ -0.1
SREBF1-215ENST00000487401 MTMR8Q96EF0 704 aa14.45□□□□□ -0.1
SREBF1-215ENST00000487401 PXMP2Q9NR77 195 aa14.45□□□□□ -0.1
SREBF1-215ENST00000487401 MAP3K20Q9NYL2 800 aaKnown RBP14.45□□□□□ -0.1
SREBF1-215ENST00000487401 MSRAQ9UJ68 235 aa14.45□□□□□ -0.1
SREBF1-215ENST00000487401 NOD1Q9Y239 953 aa14.45□□□□□ -0.1
SREBF1-215ENST00000487401 RBM8AQ9Y5S9 174 aaKnown RBP14.45□□□□□ -0.1
SREBF1-215ENST00000487401 TAF6LQ9Y6J9 622 aa14.45□□□□□ -0.1
SREBF1-215ENST00000487401 PLXNA1Q9UIW2 1896 aa14.44□□□□□ -0.1
SREBF1-215ENST00000487401 GRXCR1A8MXD5 290 aa14.44□□□□□ -0.1
SREBF1-215ENST00000487401 GCOM1H8Y6P7 765 aaPredicted RBP14.44□□□□□ -0.1
SREBF1-215ENST00000487401 PPP1R11O60927 126 aaPredicted RBP14.44□□□□□ -0.1
SREBF1-215ENST00000487401 POLR2MP0CAP2 368 aa14.44□□□□□ -0.1
SREBF1-215ENST00000487401 MYCLP12524 364 aaPredicted RBP14.44□□□□□ -0.1
SREBF1-215ENST00000487401 CASTP20810 708 aaKnown RBP14.44□□□□□ -0.1
SREBF1-215ENST00000487401 HSD17B4P51659 736 aa14.44□□□□□ -0.1
SREBF1-215ENST00000487401 OTOP2Q7RTS6 562 aa14.44□□□□□ -0.1
SREBF1-215ENST00000487401 MAFAQ8NHW3 353 aaPredicted RBP14.44□□□□□ -0.1
SREBF1-215ENST00000487401 SCLYQ96I15 445 aa14.44□□□□□ -0.1
SREBF1-215ENST00000487401 PIGSQ96S52 555 aa14.44□□□□□ -0.1
SREBF1-215ENST00000487401 WNT8AQ9H1J5 351 aa14.44□□□□□ -0.1
SREBF1-215ENST00000487401 ZNF576Q9H609 170 aa14.44□□□□□ -0.1
SREBF1-215ENST00000487401 RIOX1Q9H6W3 641 aa14.44□□□□□ -0.1
SREBF1-215ENST00000487401 SENP2Q9HC62 589 aa14.44□□□□□ -0.1
SREBF1-215ENST00000487401 MRVI1Q9Y6F6 885 aa14.44□□□□□ -0.1
SREBF1-215ENST00000487401 LAMA2P24043 3122 aaKnown RBP14.44□□□□□ -0.1
SREBF1-215ENST00000487401 PNMA6FA0A0J9YX94 578 aa14.43□□□□□ -0.1
SREBF1-215ENST00000487401 MMP3P08254 477 aa14.43□□□□□ -0.1
SREBF1-215ENST00000487401 HOXA13P31271 388 aaPredicted RBP14.43□□□□□ -0.1
SREBF1-215ENST00000487401 PBX2P40425 430 aa14.43□□□□□ -0.1
SREBF1-215ENST00000487401 ARHGAP1Q07960 439 aa14.43□□□□□ -0.1
SREBF1-215ENST00000487401 TROAPQ12815 778 aa14.43□□□□□ -0.1
SREBF1-215ENST00000487401 LAMC2Q13753 1193 aa14.43□□□□□ -0.1
SREBF1-215ENST00000487401 GRIN2CQ14957 1233 aa14.43□□□□□ -0.1
SREBF1-215ENST00000487401 RAB30Q15771 203 aa14.43□□□□□ -0.1
SREBF1-215ENST00000487401 DGKDQ16760 1214 aa14.43□□□□□ -0.1
SREBF1-215ENST00000487401 CASC1Q6TDU7 716 aa14.43□□□□□ -0.1
SREBF1-215ENST00000487401 STOX1Q6ZVD7 989 aa14.43□□□□□ -0.1
SREBF1-215ENST00000487401 PPP1R13LQ8WUF5 828 aa14.43□□□□□ -0.1
SREBF1-215ENST00000487401 PBX4Q9BYU1 374 aa14.43□□□□□ -0.1
SREBF1-215ENST00000487401 CXXC1Q9P0U4 656 aaPredicted RBP14.43□□□□□ -0.1
SREBF1-215ENST00000487401 DDX41Q9UJV9 622 aaKnown RBP14.43□□□□□ -0.1
SREBF1-215ENST00000487401 SLC4A7Q9Y6M7 1214 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms