RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 BRDTQ58F21 947 aaPredicted RBP22.19■■□□□ 1.14
CLIP2-206ENST00000487091 MFSD5Q6N075 450 aa22.19■■□□□ 1.14
CLIP2-206ENST00000487091 CATIPQ7Z7H3 387 aa22.19■■□□□ 1.14
CLIP2-206ENST00000487091 OR6J1Q8NGC5 347 aa22.19■■□□□ 1.14
CLIP2-206ENST00000487091 RMDN3Q96TC7 470 aa22.19■■□□□ 1.14
CLIP2-206ENST00000487091 GRIN2DO15399 1336 aa22.19■■□□□ 1.14
CLIP2-206ENST00000487091 PPP1R11O60927 126 aaPredicted RBP22.18■■□□□ 1.14
CLIP2-206ENST00000487091 TXNP10599 105 aaKnown RBP22.18■■□□□ 1.14
CLIP2-206ENST00000487091 HSD17B4P51659 736 aa22.18■■□□□ 1.14
CLIP2-206ENST00000487091 EPHB4P54760 987 aa22.18■■□□□ 1.14
CLIP2-206ENST00000487091 TTLL4Q14679 1199 aa22.18■■□□□ 1.14
CLIP2-206ENST00000487091 STXBP2Q15833 593 aa22.18■■□□□ 1.14
CLIP2-206ENST00000487091 MAP3K14Q99558 947 aa22.18■■□□□ 1.14
CLIP2-206ENST00000487091 MTMR10Q9NXD2 777 aa22.18■■□□□ 1.14
CLIP2-206ENST00000487091 PCDHA1Q9Y5I3 950 aa22.18■■□□□ 1.14
CLIP2-206ENST00000487091 OPLAHO14841 1288 aa22.17■■□□□ 1.14
CLIP2-206ENST00000487091 KPNA6O60684 536 aa22.17■■□□□ 1.14
CLIP2-206ENST00000487091 CFBP00751 764 aa22.17■■□□□ 1.14
CLIP2-206ENST00000487091 SLC35G1Q2M3R5 365 aa22.17■■□□□ 1.14
CLIP2-206ENST00000487091 CCDC62Q6P9F0 684 aa22.17■■□□□ 1.14
CLIP2-206ENST00000487091 Q7L0L9 218 aa22.17■■□□□ 1.14
CLIP2-206ENST00000487091 A6NJR5 290 aa22.16■■□□□ 1.14
CLIP2-206ENST00000487091 CYTH3O43739 400 aa22.16■■□□□ 1.14
CLIP2-206ENST00000487091 PURAQ00577 322 aaKnown RBP22.16■■□□□ 1.14
CLIP2-206ENST00000487091 PPIGQ13427 754 aaKnown RBP eCLIP22.16■■□□□ 1.144e-9■□□□□ 8.8
CLIP2-206ENST00000487091 NECTIN1Q15223 517 aa22.16■■□□□ 1.14
CLIP2-206ENST00000487091 ARHGEF16Q5VV41 709 aa22.16■■□□□ 1.14
CLIP2-206ENST00000487091 CASC1Q6TDU7 716 aa22.16■■□□□ 1.14
CLIP2-206ENST00000487091 TMTC2Q8N394 836 aa22.16■■□□□ 1.14
CLIP2-206ENST00000487091 TMEM199Q8N511 208 aa22.16■■□□□ 1.14
CLIP2-206ENST00000487091 LY9Q9HBG7 655 aa22.16■■□□□ 1.14
CLIP2-206ENST00000487091 GPHNQ9NQX3 736 aaPredicted RBP22.16■■□□□ 1.14
CLIP2-206ENST00000487091 PNMA6FA0A0J9YX94 578 aa22.15■■□□□ 1.14
CLIP2-206ENST00000487091 SLC27A2O14975 620 aa22.15■■□□□ 1.14
CLIP2-206ENST00000487091 EIF3JO75822 258 aaKnown RBP22.15■■□□□ 1.14
CLIP2-206ENST00000487091 ARIH2O95376 493 aa22.15■■□□□ 1.14
CLIP2-206ENST00000487091 MCM5P33992 734 aa22.15■■□□□ 1.14
CLIP2-206ENST00000487091 PSMC6P62333 389 aa22.15■■□□□ 1.14
CLIP2-206ENST00000487091 SMAD3P84022 425 aaKnown RBP22.15■■□□□ 1.14
CLIP2-206ENST00000487091 HOMER1Q86YM7 354 aa22.15■■□□□ 1.14
CLIP2-206ENST00000487091 COPS5Q92905 334 aa22.15■■□□□ 1.14
CLIP2-206ENST00000487091 TMEM87BQ96K49 555 aa22.15■■□□□ 1.14
CLIP2-206ENST00000487091 RNPC3Q96LT9 517 aaKnown RBP22.15■■□□□ 1.14
CLIP2-206ENST00000487091 PIGSQ96S52 555 aa22.15■■□□□ 1.14
CLIP2-206ENST00000487091 MTG1Q9BT17 334 aaPredicted RBP22.15■■□□□ 1.14
CLIP2-206ENST00000487091 PXMP2Q9NR77 195 aa22.15■■□□□ 1.14
CLIP2-206ENST00000487091 KIAA1217Q5T5P2 1943 aa22.15■■□□□ 1.14
CLIP2-206ENST00000487091 PRC1O43663 620 aa22.14■■□□□ 1.13
CLIP2-206ENST00000487091 DDAH1O94760 285 aa22.14■■□□□ 1.13
CLIP2-206ENST00000487091 NR3C2P08235 984 aa22.14■■□□□ 1.13
CLIP2-206ENST00000487091 MYL3P08590 195 aa22.14■■□□□ 1.13
CLIP2-206ENST00000487091 EIF2AK2P19525 551 aaKnown RBP22.14■■□□□ 1.13
CLIP2-206ENST00000487091 CREB3L3Q68CJ9 461 aa22.14■■□□□ 1.13
CLIP2-206ENST00000487091 ZNF654Q8IZM8 581 aa22.14■■□□□ 1.13
CLIP2-206ENST00000487091 ANO2Q9NQ90 1003 aa22.14■■□□□ 1.13
CLIP2-206ENST00000487091 SCN10AQ9Y5Y9 1956 aa22.14■■□□□ 1.13
CLIP2-206ENST00000487091 B4GALT4O60513 344 aa22.13■■□□□ 1.13
CLIP2-206ENST00000487091 SMARCA1P28370 1054 aa22.13■■□□□ 1.13
CLIP2-206ENST00000487091 SEPT14Q6ZU15 432 aa22.13■■□□□ 1.13
CLIP2-206ENST00000487091 SKAP1Q86WV1 359 aa22.13■■□□□ 1.13
CLIP2-206ENST00000487091 PPP1R12CQ9BZL4 782 aa22.13■■□□□ 1.13
CLIP2-206ENST00000487091 TRPV6Q9H1D0 765 aa22.13■■□□□ 1.13
CLIP2-206ENST00000487091 ALDH8A1Q9H2A2 487 aaPredicted RBP22.13■■□□□ 1.13
CLIP2-206ENST00000487091 HIPK3Q9H422 1215 aa22.13■■□□□ 1.13
CLIP2-206ENST00000487091 GH1P01241 217 aa22.12■■□□□ 1.13
CLIP2-206ENST00000487091 SUPT20HL2P0C7V6 817 aa22.12■■□□□ 1.13
CLIP2-206ENST00000487091 CSF2RAP15509 400 aa22.12■■□□□ 1.13
CLIP2-206ENST00000487091 KIF5BP33176 963 aa22.12■■□□□ 1.13
CLIP2-206ENST00000487091 CTCFLQ8NI51 663 aaPredicted RBP22.12■■□□□ 1.13
CLIP2-206ENST00000487091 PDCD2LQ9BRP1 358 aa22.12■■□□□ 1.13
CLIP2-206ENST00000487091 SPZ1Q9BXG8 430 aa22.12■■□□□ 1.13
CLIP2-206ENST00000487091 STXBP5LQ9Y2K9 1186 aa22.12■■□□□ 1.13
CLIP2-206ENST00000487091 GCOM1H8Y6P7 765 aaPredicted RBP22.11■■□□□ 1.13
CLIP2-206ENST00000487091 SH2B2O14492 632 aaPredicted RBP22.11■■□□□ 1.13
CLIP2-206ENST00000487091 POLR2MP0CAP2 368 aa22.11■■□□□ 1.13
CLIP2-206ENST00000487091 CYP2C18P33260 490 aa22.11■■□□□ 1.13
CLIP2-206ENST00000487091 LIFRP42702 1097 aa22.11■■□□□ 1.13
CLIP2-206ENST00000487091 GNAQP50148 359 aa22.11■■□□□ 1.13
CLIP2-206ENST00000487091 LY6KQ17RY6 165 aa22.11■■□□□ 1.13
CLIP2-206ENST00000487091 TMEM240Q5SV17 173 aa22.11■■□□□ 1.13
CLIP2-206ENST00000487091 ZNF697Q5TEC3 545 aa22.11■■□□□ 1.13
CLIP2-206ENST00000487091 RNF20Q5VTR2 975 aa22.11■■□□□ 1.13
CLIP2-206ENST00000487091 NFRKBQ6P4R8 1299 aa22.11■■□□□ 1.13
CLIP2-206ENST00000487091 C16orf59Q7L2K0 433 aa22.11■■□□□ 1.13
CLIP2-206ENST00000487091 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.11■■□□□ 1.13
CLIP2-206ENST00000487091 LZTS2Q9BRK4 669 aa22.11■■□□□ 1.13
CLIP2-206ENST00000487091 NOC4LQ9BVI4 516 aaKnown RBP22.11■■□□□ 1.13
CLIP2-206ENST00000487091 DDX41Q9UJV9 622 aaKnown RBP22.11■■□□□ 1.13
CLIP2-206ENST00000487091 ARHGAP1Q07960 439 aa22.1■■□□□ 1.13
CLIP2-206ENST00000487091 NBPF20Q3BBV1 942 aa22.1■■□□□ 1.13
CLIP2-206ENST00000487091 NFXL1Q6ZNB6 911 aa22.1■■□□□ 1.13
CLIP2-206ENST00000487091 VSIG10LQ86VR7 867 aa22.1■■□□□ 1.13
CLIP2-206ENST00000487091 AFG1LQ8WV93 481 aa22.1■■□□□ 1.13
CLIP2-206ENST00000487091 COL6A3P12111 3177 aa22.09■■□□□ 1.13
CLIP2-206ENST00000487091 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.09■■□□□ 1.13
CLIP2-206ENST00000487091 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.09■■□□□ 1.13
CLIP2-206ENST00000487091 CCDC69A6NI79 296 aa22.09■■□□□ 1.13
CLIP2-206ENST00000487091 CALM1P0DP23 149 aa22.09■■□□□ 1.13
CLIP2-206ENST00000487091 CALM2P0DP24 149 aa22.09■■□□□ 1.13
CLIP2-206ENST00000487091 CALM3P0DP25 149 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms