RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 PCDH10Q9P2E7 1040 aa25.91■■□□□ 1.74
CDHR3-212ENST00000487084 KLF18A0A0U1RQI7 1052 aa25.9■■□□□ 1.74
CDHR3-212ENST00000487084 SMARCA1P28370 1054 aa25.9■■□□□ 1.74
CDHR3-212ENST00000487084 BRPF3Q9ULD4 1205 aa25.9■■□□□ 1.74
CDHR3-212ENST00000487084 GCOM1H8Y6P7 765 aaPredicted RBP25.89■■□□□ 1.74
CDHR3-212ENST00000487084 ZBTB43O43298 467 aa25.89■■□□□ 1.74
CDHR3-212ENST00000487084 ASGR1P07306 291 aa25.89■■□□□ 1.74
CDHR3-212ENST00000487084 POLR2MP0CAP2 368 aa25.89■■□□□ 1.74
CDHR3-212ENST00000487084 CCSAPQ6IQ19 270 aaPredicted RBP25.89■■□□□ 1.74
CDHR3-212ENST00000487084 TMTC3Q6ZXV5 915 aa25.89■■□□□ 1.74
CDHR3-212ENST00000487084 VTI1AQ96AJ9 217 aa25.89■■□□□ 1.74
CDHR3-212ENST00000487084 CTAGE5O15320 804 aa25.88■■□□□ 1.73
CDHR3-212ENST00000487084 CASTP20810 708 aaKnown RBP25.88■■□□□ 1.73
CDHR3-212ENST00000487084 PSMA5P28066 241 aa25.88■■□□□ 1.73
CDHR3-212ENST00000487084 SNX17Q15036 470 aa25.88■■□□□ 1.73
CDHR3-212ENST00000487084 PPP2R5BQ15173 497 aa25.88■■□□□ 1.73
CDHR3-212ENST00000487084 FSCN1Q16658 493 aaKnown RBP25.88■■□□□ 1.73
CDHR3-212ENST00000487084 RTN1Q16799 776 aa25.88■■□□□ 1.73
CDHR3-212ENST00000487084 DUSP28Q4G0W2 176 aa25.88■■□□□ 1.73
CDHR3-212ENST00000487084 Q6ZUG5 572 aa25.88■■□□□ 1.73
CDHR3-212ENST00000487084 FCHSD1Q86WN1 690 aa25.88■■□□□ 1.73
CDHR3-212ENST00000487084 GLT1D1Q96MS3 346 aa25.88■■□□□ 1.73
CDHR3-212ENST00000487084 IWS1Q96ST2 819 aa25.88■■□□□ 1.73
CDHR3-212ENST00000487084 PXMP2Q9NR77 195 aa25.88■■□□□ 1.73
CDHR3-212ENST00000487084 RBM28Q9NW13 759 aaKnown RBP25.88■■□□□ 1.73
CDHR3-212ENST00000487084 MAP3K20Q9NYL2 800 aaKnown RBP25.88■■□□□ 1.73
CDHR3-212ENST00000487084 PRKAG2Q9UGJ0 569 aa25.88■■□□□ 1.73
CDHR3-212ENST00000487084 hCG_1642624A0A1W2PR95 340 aa25.87■■□□□ 1.73
CDHR3-212ENST00000487084 GOLGA8AA7E2F4 631 aa25.87■■□□□ 1.73
CDHR3-212ENST00000487084 GOLGA8BA8MQT2 603 aa25.87■■□□□ 1.73
CDHR3-212ENST00000487084 GHRHRQ02643 423 aa25.87■■□□□ 1.73
CDHR3-212ENST00000487084 STXBP2Q15833 593 aa25.87■■□□□ 1.73
CDHR3-212ENST00000487084 HABP4Q5JVS0 413 aaKnown RBP25.87■■□□□ 1.73
CDHR3-212ENST00000487084 SCFD2Q8WU76 684 aa25.87■■□□□ 1.73
CDHR3-212ENST00000487084 PRDM5Q9NQX1 630 aaPredicted RBP25.87■■□□□ 1.73
CDHR3-212ENST00000487084 RBM27Q9P2N5 1060 aaKnown RBP25.87■■□□□ 1.73
CDHR3-212ENST00000487084 Q9Y3F1 56 aa25.87■■□□□ 1.73
CDHR3-212ENST00000487084 RBM47A0AV96 593 aaKnown RBP25.86■■□□□ 1.73
CDHR3-212ENST00000487084 EPB41L2O43491 1005 aaKnown RBP25.86■■□□□ 1.73
CDHR3-212ENST00000487084 ZEB2O60315 1214 aa25.86■■□□□ 1.73
CDHR3-212ENST00000487084 RPS6KB1P23443 525 aa25.86■■□□□ 1.73
CDHR3-212ENST00000487084 APOBRQ0VD83 1088 aa25.86■■□□□ 1.73
CDHR3-212ENST00000487084 SEPT14Q6ZU15 432 aa25.86■■□□□ 1.73
CDHR3-212ENST00000487084 SAMD3Q8N6K7 520 aa25.86■■□□□ 1.73
CDHR3-212ENST00000487084 OR6J1Q8NGC5 347 aa25.86■■□□□ 1.73
CDHR3-212ENST00000487084 BRF1Q92994 677 aa25.86■■□□□ 1.73
CDHR3-212ENST00000487084 USP26Q9BXU7 913 aa25.86■■□□□ 1.73
CDHR3-212ENST00000487084 PQBP1O60828 265 aaKnown RBP25.85■■□□□ 1.73
CDHR3-212ENST00000487084 NR3C2P08235 984 aa25.85■■□□□ 1.73
CDHR3-212ENST00000487084 TXNP10599 105 aaKnown RBP25.85■■□□□ 1.73
CDHR3-212ENST00000487084 MYCLP12524 364 aaPredicted RBP25.85■■□□□ 1.73
CDHR3-212ENST00000487084 TTLL4Q14679 1199 aa25.85■■□□□ 1.73
CDHR3-212ENST00000487084 C1orf53Q5VUE5 145 aa25.85■■□□□ 1.73
CDHR3-212ENST00000487084 MAGEA10P43363 369 aaPredicted RBP25.84■■□□□ 1.73
CDHR3-212ENST00000487084 NKX3-2P78367 333 aa25.84■■□□□ 1.73
CDHR3-212ENST00000487084 TLE2Q04725 743 aa25.84■■□□□ 1.73
CDHR3-212ENST00000487084 CXCL17Q6UXB2 119 aa25.84■■□□□ 1.73
CDHR3-212ENST00000487084 COPS5Q92905 334 aa25.84■■□□□ 1.73
CDHR3-212ENST00000487084 PDCD2LQ9BRP1 358 aa25.84■■□□□ 1.73
CDHR3-212ENST00000487084 NKRFO15226 690 aaKnown RBP eCLIP25.83■■□□□ 1.73
CDHR3-212ENST00000487084 METAP2P50579 478 aaKnown RBP eCLIP25.83■■□□□ 1.73
CDHR3-212ENST00000487084 MDM2Q00987 491 aaPredicted RBP25.83■■□□□ 1.73
CDHR3-212ENST00000487084 HEATR3Q7Z4Q2 680 aa25.83■■□□□ 1.73
CDHR3-212ENST00000487084 SMARCC2Q8TAQ2 1214 aa25.83■■□□□ 1.73
CDHR3-212ENST00000487084 CUL5Q93034 780 aa25.83■■□□□ 1.73
CDHR3-212ENST00000487084 ELP1O95163 1332 aa25.83■■□□□ 1.73
CDHR3-212ENST00000487084 CNTNAP5Q8WYK1 1306 aa25.83■■□□□ 1.73
CDHR3-212ENST00000487084 A0A0U1RQG5 324 aaPredicted RBP25.82■■□□□ 1.72
CDHR3-212ENST00000487084 EIF3JO75822 258 aaKnown RBP25.82■■□□□ 1.72
CDHR3-212ENST00000487084 ARIH2O95376 493 aa25.82■■□□□ 1.72
CDHR3-212ENST00000487084 PGM5Q15124 567 aa25.82■■□□□ 1.72
CDHR3-212ENST00000487084 GPKOWQ92917 476 aaPredicted RBP eCLIP25.82■■□□□ 1.72
CDHR3-212ENST00000487084 CDC27P30260 824 aa25.81■■□□□ 1.72
CDHR3-212ENST00000487084 USP17L6PQ6QN14 398 aa25.81■■□□□ 1.72
CDHR3-212ENST00000487084 IL31RAQ8NI17 732 aa25.81■■□□□ 1.72
CDHR3-212ENST00000487084 GDF15Q99988 308 aa25.81■■□□□ 1.72
CDHR3-212ENST00000487084 LBHD1Q9BQE6 289 aaPredicted RBP25.81■■□□□ 1.72
CDHR3-212ENST00000487084 PDLIM7Q9NR12 457 aa25.81■■□□□ 1.72
CDHR3-212ENST00000487084 DNAH12Q6ZR08 3092 aa25.81■■□□□ 1.72
CDHR3-212ENST00000487084 CABYRO75952 493 aa25.8■■□□□ 1.72
CDHR3-212ENST00000487084 MYL3P08590 195 aa25.8■■□□□ 1.72
CDHR3-212ENST00000487084 CLTBP09497 229 aa25.8■■□□□ 1.72
CDHR3-212ENST00000487084 CCND2P30279 289 aa25.8■■□□□ 1.72
CDHR3-212ENST00000487084 CPT1AP50416 773 aa25.8■■□□□ 1.72
CDHR3-212ENST00000487084 RCAN1P53805 252 aa25.8■■□□□ 1.72
CDHR3-212ENST00000487084 LY6KQ17RY6 165 aa25.8■■□□□ 1.72
CDHR3-212ENST00000487084 BRDTQ58F21 947 aaPredicted RBP25.8■■□□□ 1.72
CDHR3-212ENST00000487084 RUFY3Q7L099 469 aa25.8■■□□□ 1.72
CDHR3-212ENST00000487084 ZFP91Q96JP5 570 aaPredicted RBP25.8■■□□□ 1.72
CDHR3-212ENST00000487084 PRO3102Q9H379 93 aa25.8■■□□□ 1.72
CDHR3-212ENST00000487084 MRVI1Q9Y6F6 885 aa25.8■■□□□ 1.72
CDHR3-212ENST00000487084 DCDC2CA8MYV0 355 aa25.79■■□□□ 1.72
CDHR3-212ENST00000487084 SH3RF1Q7Z6J0 888 aa25.79■■□□□ 1.72
CDHR3-212ENST00000487084 UBE2OQ9C0C9 1292 aaKnown RBP25.79■■□□□ 1.72
CDHR3-212ENST00000487084 PSTPIP2Q9H939 334 aa25.79■■□□□ 1.72
CDHR3-212ENST00000487084 FAM217BQ9NTX9 383 aaPredicted RBP25.79■■□□□ 1.72
CDHR3-212ENST00000487084 CYP46A1Q9Y6A2 500 aa25.79■■□□□ 1.72
CDHR3-212ENST00000487084 V9GY48 417 aaPredicted RBP25.79■■□□□ 1.72
CDHR3-212ENST00000487084 TRIOBPQ9H2D6 2365 aa25.79■■□□□ 1.72
CDHR3-212ENST00000487084 CCDC196A0A1B0GTZ2 297 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms