RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 C8BP07358 591 aa5.57□□□□□ -1.52
SNRNP27-204ENST00000487029 CD3EP07766 207 aa5.57□□□□□ -1.52
SNRNP27-204ENST00000487029 CD247P20963 164 aa5.57□□□□□ -1.52
SNRNP27-204ENST00000487029 NOP2P46087 812 aaKnown RBP5.57□□□□□ -1.52
SNRNP27-204ENST00000487029 PMS1P54277 932 aaKnown RBP5.57□□□□□ -1.52
SNRNP27-204ENST00000487029 APOBRQ0VD83 1088 aa5.57□□□□□ -1.52
SNRNP27-204ENST00000487029 PAK2Q13177 524 aa5.57□□□□□ -1.52
SNRNP27-204ENST00000487029 SF3A1Q15459 793 aaKnown RBP5.57□□□□□ -1.52
SNRNP27-204ENST00000487029 LRRFIP1Q32MZ4 808 aaKnown RBP5.57□□□□□ -1.52
SNRNP27-204ENST00000487029 ANKRD39Q53RE8 183 aa5.57□□□□□ -1.52
SNRNP27-204ENST00000487029 KIAA0825Q8IV33 1275 aa5.57□□□□□ -1.52
SNRNP27-204ENST00000487029 CHST13Q8NET6 341 aa5.57□□□□□ -1.52
SNRNP27-204ENST00000487029 DHRS1Q96LJ7 313 aa5.57□□□□□ -1.52
SNRNP27-204ENST00000487029 USP35Q9P2H5 1018 aa5.57□□□□□ -1.52
SNRNP27-204ENST00000487029 SIT1Q9Y3P8 196 aa5.57□□□□□ -1.52
SNRNP27-204ENST00000487029 IGSF3O75054 1194 aa5.56□□□□□ -1.52
SNRNP27-204ENST00000487029 GJA8P48165 433 aa5.56□□□□□ -1.52
SNRNP27-204ENST00000487029 ZNF165P49910 485 aa5.56□□□□□ -1.52
SNRNP27-204ENST00000487029 INTS3Q68E01 1043 aaKnown RBP5.56□□□□□ -1.52
SNRNP27-204ENST00000487029 SLITRK4Q8IW52 837 aa5.56□□□□□ -1.52
SNRNP27-204ENST00000487029 GPRASP2Q96D09 838 aa5.56□□□□□ -1.52
SNRNP27-204ENST00000487029 MTA3Q9BTC8 594 aa5.56□□□□□ -1.52
SNRNP27-204ENST00000487029 ZNF747Q9BV97 191 aa5.56□□□□□ -1.52
SNRNP27-204ENST00000487029 NOL6Q9H6R4 1146 aaKnown RBP5.56□□□□□ -1.52
SNRNP27-204ENST00000487029 TSC22D4Q9Y3Q8 395 aa5.56□□□□□ -1.52
SNRNP27-204ENST00000487029 FHOD1Q9Y613 1164 aa5.56□□□□□ -1.52
SNRNP27-204ENST00000487029 CYR61O00622 381 aa5.55□□□□□ -1.52
SNRNP27-204ENST00000487029 RPL13P26373 211 aaKnown RBP5.55□□□□□ -1.52
SNRNP27-204ENST00000487029 THBS2P35442 1172 aa5.55□□□□□ -1.52
SNRNP27-204ENST00000487029 ICAM4Q14773 271 aa5.55□□□□□ -1.52
SNRNP27-204ENST00000487029 ZYXQ15942 572 aaKnown RBP5.55□□□□□ -1.52
SNRNP27-204ENST00000487029 MCTP2Q6DN12 878 aa5.55□□□□□ -1.52
SNRNP27-204ENST00000487029 STK32CQ86UX6 486 aa5.55□□□□□ -1.52
SNRNP27-204ENST00000487029 VPS37DQ86XT2 251 aa5.55□□□□□ -1.52
SNRNP27-204ENST00000487029 LGI4Q8N135 537 aa5.55□□□□□ -1.52
SNRNP27-204ENST00000487029 FAM26EQ8N5C1 309 aa5.55□□□□□ -1.52
SNRNP27-204ENST00000487029 LZTR1Q8N653 840 aa5.55□□□□□ -1.52
SNRNP27-204ENST00000487029 DRC1Q96MC2 740 aa5.55□□□□□ -1.52
SNRNP27-204ENST00000487029 ZDHHC15Q96MV8 337 aa5.55□□□□□ -1.52
SNRNP27-204ENST00000487029 C11orf84Q9BUA3 381 aaPredicted RBP5.55□□□□□ -1.52
SNRNP27-204ENST00000487029 ZNF536O15090 1300 aa5.54□□□□□ -1.52
SNRNP27-204ENST00000487029 MROH6A6NGR9 719 aa5.54□□□□□ -1.52
SNRNP27-204ENST00000487029 SMARCA5O60264 1052 aaPredicted RBP5.54□□□□□ -1.52
SNRNP27-204ENST00000487029 ARID5AQ03989 594 aa5.54□□□□□ -1.52
SNRNP27-204ENST00000487029 KIAA2012Q0VF49 1180 aa5.54□□□□□ -1.52
SNRNP27-204ENST00000487029 SLC9A5Q14940 896 aa5.54□□□□□ -1.52
SNRNP27-204ENST00000487029 CRB2Q5IJ48 1285 aa5.54□□□□□ -1.52
SNRNP27-204ENST00000487029 TXNDC5Q8NBS9 432 aaKnown RBP5.54□□□□□ -1.52
SNRNP27-204ENST00000487029 RASGRP4Q8TDF6 673 aa5.54□□□□□ -1.52
SNRNP27-204ENST00000487029 NKD1Q969G9 470 aa5.54□□□□□ -1.52
SNRNP27-204ENST00000487029 PEX11GQ96HA9 241 aa5.54□□□□□ -1.52
SNRNP27-204ENST00000487029 SPATA32Q96LK8 384 aa5.54□□□□□ -1.52
SNRNP27-204ENST00000487029 GMLQ99445 158 aa5.54□□□□□ -1.52
SNRNP27-204ENST00000487029 NT5C1AQ9BXI3 368 aa5.54□□□□□ -1.52
SNRNP27-204ENST00000487029 TANGO6Q9C0B7 1094 aa5.54□□□□□ -1.52
SNRNP27-204ENST00000487029 SLITRK6Q9H5Y7 841 aa5.54□□□□□ -1.52
SNRNP27-204ENST00000487029 GULP1Q9UBP9 304 aa5.54□□□□□ -1.52
SNRNP27-204ENST00000487029 CYP2C8P10632 490 aa5.53□□□□□ -1.52
SNRNP27-204ENST00000487029 DNAJA1P31689 397 aaKnown RBP5.53□□□□□ -1.52
SNRNP27-204ENST00000487029 PPP2R5DQ14738 602 aa5.53□□□□□ -1.52
SNRNP27-204ENST00000487029 RCSD1Q6JBY9 416 aa5.53□□□□□ -1.52
SNRNP27-204ENST00000487029 GLB1LQ6UWU2 654 aa5.53□□□□□ -1.52
SNRNP27-204ENST00000487029 CABP7Q86V35 215 aa5.53□□□□□ -1.52
SNRNP27-204ENST00000487029 CPNE8Q86YQ8 564 aa5.53□□□□□ -1.52
SNRNP27-204ENST00000487029 NETO2Q8NC67 525 aa5.53□□□□□ -1.52
SNRNP27-204ENST00000487029 PCED1AQ9H1Q7 454 aa5.53□□□□□ -1.52
SNRNP27-204ENST00000487029 CD248Q9HCU0 757 aa5.53□□□□□ -1.52
SNRNP27-204ENST00000487029 PPP4R1LQ9P1A2 415 aa5.53□□□□□ -1.52
SNRNP27-204ENST00000487029 SF3B6Q9Y3B4 125 aaKnown RBP5.53□□□□□ -1.52
SNRNP27-204ENST00000487029 AURKAO14965 403 aa5.52□□□□□ -1.53
SNRNP27-204ENST00000487029 CBFA2T2O43439 604 aa5.52□□□□□ -1.53
SNRNP27-204ENST00000487029 B4GALT3O60512 393 aa5.52□□□□□ -1.53
SNRNP27-204ENST00000487029 ZBTB7AO95365 584 aa5.52□□□□□ -1.53
SNRNP27-204ENST00000487029 AMHP03971 560 aa5.52□□□□□ -1.53
SNRNP27-204ENST00000487029 ATF4P18848 351 aaPredicted RBP5.52□□□□□ -1.53
SNRNP27-204ENST00000487029 POU4F1Q01851 419 aa5.52□□□□□ -1.53
SNRNP27-204ENST00000487029 FAM26FQ5R3K3 315 aa5.52□□□□□ -1.53
SNRNP27-204ENST00000487029 PRR31Q5SQ13 230 aa5.52□□□□□ -1.53
SNRNP27-204ENST00000487029 SMARCC1Q92922 1105 aaPredicted RBP5.52□□□□□ -1.53
SNRNP27-204ENST00000487029 KISS1RQ969F8 398 aaPredicted RBP5.52□□□□□ -1.53
SNRNP27-204ENST00000487029 KLC2Q9H0B6 622 aa5.52□□□□□ -1.53
SNRNP27-204ENST00000487029 NUDT5Q9UKK9 219 aa5.52□□□□□ -1.53
SNRNP27-204ENST00000487029 ZNRF3Q9ULT6 936 aa5.52□□□□□ -1.53
SNRNP27-204ENST00000487029 STXBP3O00186 592 aa5.51□□□□□ -1.53
SNRNP27-204ENST00000487029 DDX3XO00571 662 aaKnown RBP eCLIP5.51□□□□□ -1.53
SNRNP27-204ENST00000487029 FZD7O75084 574 aa5.51□□□□□ -1.53
SNRNP27-204ENST00000487029 VAMP4O75379 141 aa5.51□□□□□ -1.53
SNRNP27-204ENST00000487029 NTRK1P04629 796 aa5.51□□□□□ -1.53
SNRNP27-204ENST00000487029 ATP2B1P20020 1258 aa5.51□□□□□ -1.53
SNRNP27-204ENST00000487029 KLF10Q13118 480 aa5.51□□□□□ -1.53
SNRNP27-204ENST00000487029 COL9A2Q14055 689 aaPredicted RBP5.51□□□□□ -1.53
SNRNP27-204ENST00000487029 WWC2Q6AWC2 1192 aa5.51□□□□□ -1.53
SNRNP27-204ENST00000487029 RUFY4Q6ZNE9 571 aa5.51□□□□□ -1.53
SNRNP27-204ENST00000487029 UBXN4Q92575 508 aa5.51□□□□□ -1.53
SNRNP27-204ENST00000487029 SEC16BQ96JE7 1060 aa5.51□□□□□ -1.53
SNRNP27-204ENST00000487029 VPS11Q9H270 941 aa5.51□□□□□ -1.53
SNRNP27-204ENST00000487029 PPP1R1BQ9UD71 204 aaPredicted RBP5.51□□□□□ -1.53
SNRNP27-204ENST00000487029 ING1Q9UK53 422 aaPredicted RBP5.51□□□□□ -1.53
SNRNP27-204ENST00000487029 GPR42O15529 346 aa5.5□□□□□ -1.53
SNRNP27-204ENST00000487029 FGRP09769 529 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms