RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 NLRC5Q86WI3 1866 aa10.08□□□□□ -0.8
APTX-228ENST00000486724 IGSF3O75054 1194 aa10.07□□□□□ -0.8
APTX-228ENST00000486724 CXCL10P02778 98 aa10.07□□□□□ -0.8
APTX-228ENST00000486724 UQCRFS1P1P0C7P4 283 aa10.07□□□□□ -0.8
APTX-228ENST00000486724 NDUFV1P49821 464 aa10.07□□□□□ -0.8
APTX-228ENST00000486724 CPT1AP50416 773 aa10.07□□□□□ -0.8
APTX-228ENST00000486724 PLCD1P51178 756 aa10.07□□□□□ -0.8
APTX-228ENST00000486724 PTPN11Q06124 597 aaPredicted RBP10.07□□□□□ -0.8
APTX-228ENST00000486724 HDAC1Q13547 482 aaPredicted RBP10.07□□□□□ -0.8
APTX-228ENST00000486724 LRRC8DQ7L1W4 858 aa10.07□□□□□ -0.8
APTX-228ENST00000486724 CENPQQ7L2Z9 268 aaPredicted RBP10.07□□□□□ -0.8
APTX-228ENST00000486724 TMEM192Q8IY95 271 aa10.07□□□□□ -0.8
APTX-228ENST00000486724 SMRP1Q8NCR6 262 aa10.07□□□□□ -0.8
APTX-228ENST00000486724 KCNG4Q8TDN1 519 aa10.07□□□□□ -0.8
APTX-228ENST00000486724 MSLNLQ96KJ4 702 aa10.07□□□□□ -0.8
APTX-228ENST00000486724 MTG1Q9BT17 334 aaPredicted RBP10.07□□□□□ -0.8
APTX-228ENST00000486724 PHF7Q9BWX1 381 aaPredicted RBP10.07□□□□□ -0.8
APTX-228ENST00000486724 ZMYND15Q9H091 742 aa10.07□□□□□ -0.8
APTX-228ENST00000486724 COPRSQ9NQ92 184 aa10.07□□□□□ -0.8
APTX-228ENST00000486724 GPHNQ9NQX3 736 aaPredicted RBP10.07□□□□□ -0.8
APTX-228ENST00000486724 FBXO40Q9UH90 709 aa10.07□□□□□ -0.8
APTX-228ENST00000486724 SCN10AQ9Y5Y9 1956 aa10.06□□□□□ -0.8
APTX-228ENST00000486724 NAV1Q8NEY1 1877 aa10.06□□□□□ -0.8
APTX-228ENST00000486724 FASNP49327 2511 aaKnown RBP10.06□□□□□ -0.8
APTX-228ENST00000486724 ASB14A6NK59 587 aa10.06□□□□□ -0.8
APTX-228ENST00000486724 LMNAP02545 664 aaKnown RBP10.06□□□□□ -0.8
APTX-228ENST00000486724 GNAI2P04899 355 aa10.06□□□□□ -0.8
APTX-228ENST00000486724 MYL3P08590 195 aa10.06□□□□□ -0.8
APTX-228ENST00000486724 SELPP16109 830 aa10.06□□□□□ -0.8
APTX-228ENST00000486724 SLC4A3P48751 1232 aa10.06□□□□□ -0.8
APTX-228ENST00000486724 GABPAQ06546 454 aa10.06□□□□□ -0.8
APTX-228ENST00000486724 TFCP2Q12800 502 aa10.06□□□□□ -0.8
APTX-228ENST00000486724 GPNMBQ14956 572 aa10.06□□□□□ -0.8
APTX-228ENST00000486724 IQSEC1Q6DN90 963 aa10.06□□□□□ -0.8
APTX-228ENST00000486724 ZBTB33Q86T24 672 aa10.06□□□□□ -0.8
APTX-228ENST00000486724 CLEC10AQ8IUN9 316 aa10.06□□□□□ -0.8
APTX-228ENST00000486724 RPGRIP1Q96KN7 1286 aa10.06□□□□□ -0.8
APTX-228ENST00000486724 LMAN2LQ9H0V9 348 aa10.06□□□□□ -0.8
APTX-228ENST00000486724 SEMA4AQ9H3S1 761 aa10.06□□□□□ -0.8
APTX-228ENST00000486724 INCENPQ9NQS7 918 aa10.06□□□□□ -0.8
APTX-228ENST00000486724 BRPF3Q9ULD4 1205 aa10.06□□□□□ -0.8
APTX-228ENST00000486724 MICAL3Q7RTP6 2002 aa10.06□□□□□ -0.8
APTX-228ENST00000486724 MYH8P13535 1937 aa10.05□□□□□ -0.8
APTX-228ENST00000486724 TRIP12Q14669 1992 aaPredicted RBP10.05□□□□□ -0.8
APTX-228ENST00000486724 ATP2A1O14983 1001 aa10.05□□□□□ -0.8
APTX-228ENST00000486724 LINC01565O15544 149 aa10.05□□□□□ -0.8
APTX-228ENST00000486724 AMHP03971 560 aa10.05□□□□□ -0.8
APTX-228ENST00000486724 POLR3DP05423 398 aaPredicted RBP10.05□□□□□ -0.8
APTX-228ENST00000486724 UBTFL1P0CB47 393 aaPredicted RBP10.05□□□□□ -0.8
APTX-228ENST00000486724 TCTN1Q2MV58 587 aa10.05□□□□□ -0.8
APTX-228ENST00000486724 FAM83BQ5T0W9 1011 aa10.05□□□□□ -0.8
APTX-228ENST00000486724 L1TD1Q5T7N2 865 aaKnown RBP10.05□□□□□ -0.8
APTX-228ENST00000486724 ASTLQ6HA08 431 aaPredicted RBP10.05□□□□□ -0.8
APTX-228ENST00000486724 CEP85Q6P2H3 762 aa10.05□□□□□ -0.8
APTX-228ENST00000486724 SIAH1Q8IUQ4 282 aa10.05□□□□□ -0.8
APTX-228ENST00000486724 MYOCDQ8IZQ8 938 aa10.05□□□□□ -0.8
APTX-228ENST00000486724 FAM133AQ8N9E0 248 aa10.05□□□□□ -0.8
APTX-228ENST00000486724 MIGA1Q8NAN2 632 aa10.05□□□□□ -0.8
APTX-228ENST00000486724 YME1L1Q96TA2 773 aa10.05□□□□□ -0.8
APTX-228ENST00000486724 HINFPQ9BQA5 517 aa10.05□□□□□ -0.8
APTX-228ENST00000486724 SLF1Q9BQI6 1058 aa10.05□□□□□ -0.8
APTX-228ENST00000486724 RWDD1Q9H446 243 aaPredicted RBP10.05□□□□□ -0.8
APTX-228ENST00000486724 IGFLR1Q9H665 355 aa10.05□□□□□ -0.8
APTX-228ENST00000486724 C1orf115Q9H7X2 142 aa10.05□□□□□ -0.8
APTX-228ENST00000486724 GOPCQ9HD26 462 aa10.05□□□□□ -0.8
APTX-228ENST00000486724 HDAC5Q9UQL6 1122 aa10.05□□□□□ -0.8
APTX-228ENST00000486724 PCDHGC5Q9Y5F6 944 aa10.05□□□□□ -0.8
APTX-228ENST00000486724 NBNO60934 754 aa10.04□□□□□ -0.8
APTX-228ENST00000486724 CYP7A1P22680 504 aa10.04□□□□□ -0.8
APTX-228ENST00000486724 GTF2F1P35269 517 aaKnown RBP eCLIP10.04□□□□□ -0.8
APTX-228ENST00000486724 CNTN2Q02246 1040 aa10.04□□□□□ -0.8
APTX-228ENST00000486724 COASYQ13057 564 aa10.04□□□□□ -0.8
APTX-228ENST00000486724 ADAM15Q13444 863 aa10.04□□□□□ -0.8
APTX-228ENST00000486724 PTGISQ16647 500 aa10.04□□□□□ -0.8
APTX-228ENST00000486724 RSPO4Q2I0M5 234 aaPredicted RBP10.04□□□□□ -0.8
APTX-228ENST00000486724 BRDTQ58F21 947 aaPredicted RBP10.04□□□□□ -0.8
APTX-228ENST00000486724 KIAA0319Q5VV43 1072 aa10.04□□□□□ -0.8
APTX-228ENST00000486724 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.04□□□□□ -0.8
APTX-228ENST00000486724 FBXO16Q8IX29 292 aaPredicted RBP10.04□□□□□ -0.8
APTX-228ENST00000486724 RPAP2Q8IXW5 612 aaPredicted RBP10.04□□□□□ -0.8
APTX-228ENST00000486724 CPXCR1Q8N123 301 aa10.04□□□□□ -0.8
APTX-228ENST00000486724 CHST13Q8NET6 341 aa10.04□□□□□ -0.8
APTX-228ENST00000486724 PPP2R3CQ969Q6 453 aa10.04□□□□□ -0.8
APTX-228ENST00000486724 CHAMP1Q96JM3 812 aa10.04□□□□□ -0.8
APTX-228ENST00000486724 C11orf84Q9BUA3 381 aaPredicted RBP10.04□□□□□ -0.8
APTX-228ENST00000486724 PDGFCQ9NRA1 345 aa10.04□□□□□ -0.8
APTX-228ENST00000486724 USP15Q9Y4E8 981 aaPredicted RBP10.04□□□□□ -0.8
APTX-228ENST00000486724 MYO7AQ13402 2215 aa10.04□□□□□ -0.8
APTX-228ENST00000486724 SPTBN2O15020 2390 aa10.04□□□□□ -0.8
APTX-228ENST00000486724 MYO5AQ9Y4I1 1855 aaKnown RBP10.04□□□□□ -0.8
APTX-228ENST00000486724 USP17L12C9JPN9 530 aa10.03□□□□□ -0.8
APTX-228ENST00000486724 USP17L21D6R901 530 aa10.03□□□□□ -0.8
APTX-228ENST00000486724 RAD21O60216 631 aa10.03□□□□□ -0.8
APTX-228ENST00000486724 IGHDP01880 384 aa10.03□□□□□ -0.8
APTX-228ENST00000486724 SDHBP21912 280 aa10.03□□□□□ -0.8
APTX-228ENST00000486724 CTNNB1P35222 781 aa10.03□□□□□ -0.8
APTX-228ENST00000486724 RBL2Q08999 1139 aa10.03□□□□□ -0.8
APTX-228ENST00000486724 HSP90AA2PQ14568 343 aaPredicted RBP10.03□□□□□ -0.8
APTX-228ENST00000486724 DUSP28Q4G0W2 176 aa10.03□□□□□ -0.8
APTX-228ENST00000486724 TMEM63BQ5T3F8 832 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms