RNA–Protein interactions for RNA: ENST00000486417.5

TMC1-204, Transcript of transmembrane channel like 1, humanhuman

TSL 2

Gene TMC1, Length 1,528 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-204ENST00000486417 OGFOD1Q8N543 542 aa8.24□□□□□ -1.09
TMC1-204ENST00000486417 ZNF713Q8N859 430 aaPredicted RBP8.24□□□□□ -1.09
TMC1-204ENST00000486417 CCDC12Q8WUD4 166 aaPredicted RBP8.24□□□□□ -1.09
TMC1-204ENST00000486417 RRP36Q96EU6 259 aaKnown RBP8.24□□□□□ -1.09
TMC1-204ENST00000486417 ZBED3Q96IU2 234 aaPredicted RBP8.24□□□□□ -1.09
TMC1-204ENST00000486417 PDLIM2Q96JY6 352 aa8.24□□□□□ -1.09
TMC1-204ENST00000486417 TIGD1Q96MW7 591 aa8.24□□□□□ -1.09
TMC1-204ENST00000486417 CLIC6Q96NY7 704 aa8.24□□□□□ -1.09
TMC1-204ENST00000486417 PIGSQ96S52 555 aa8.24□□□□□ -1.09
TMC1-204ENST00000486417 CSRNP1Q96S65 589 aa8.24□□□□□ -1.09
TMC1-204ENST00000486417 RIOX1Q9H6W3 641 aa8.24□□□□□ -1.09
TMC1-204ENST00000486417 NYAP2Q9P242 653 aa8.24□□□□□ -1.09
TMC1-204ENST00000486417 PPP1R1BQ9UD71 204 aaPredicted RBP8.24□□□□□ -1.09
TMC1-204ENST00000486417 SEC63Q9UGP8 760 aaKnown RBP8.24□□□□□ -1.09
TMC1-204ENST00000486417 SRPRBQ9Y5M8 271 aaKnown RBP8.24□□□□□ -1.09
TMC1-204ENST00000486417 UNCXA6NJT0 531 aa8.24□□□□□ -1.09
TMC1-204ENST00000486417 USP17L15C9J2P7 530 aa8.24□□□□□ -1.09
TMC1-204ENST00000486417 USP17L10C9JJH3 530 aa8.24□□□□□ -1.09
TMC1-204ENST00000486417 USP17L13C9JLJ4 530 aa8.24□□□□□ -1.09
TMC1-204ENST00000486417 USP17L11C9JVI0 530 aa8.24□□□□□ -1.09
TMC1-204ENST00000486417 USP17L18D6R9N7 530 aa8.24□□□□□ -1.09
TMC1-204ENST00000486417 USP17L22D6RA61 530 aa8.24□□□□□ -1.09
TMC1-204ENST00000486417 USP17L17D6RBQ6 530 aa8.24□□□□□ -1.09
TMC1-204ENST00000486417 USP17L19D6RCP7 530 aa8.24□□□□□ -1.09
TMC1-204ENST00000486417 USP17L20D6RJB6 530 aa8.24□□□□□ -1.09
TMC1-204ENST00000486417 ZNF202O95125 648 aa8.24□□□□□ -1.09
TMC1-204ENST00000486417 GDF11O95390 407 aa8.24□□□□□ -1.09
TMC1-204ENST00000486417 SYKP43405 635 aa8.24□□□□□ -1.09
TMC1-204ENST00000486417 NAPAP54920 295 aa8.24□□□□□ -1.09
TMC1-204ENST00000486417 SH3BP2P78314 561 aa8.24□□□□□ -1.09
TMC1-204ENST00000486417 ATP2B2Q01814 1243 aa8.24□□□□□ -1.09
TMC1-204ENST00000486417 ICA1Q05084 483 aa8.24□□□□□ -1.09
TMC1-204ENST00000486417 GRIN1Q05586 938 aa8.24□□□□□ -1.09
TMC1-204ENST00000486417 USP17L24Q0WX57 530 aa8.24□□□□□ -1.09
TMC1-204ENST00000486417 AGERQ15109 404 aa8.24□□□□□ -1.09
TMC1-204ENST00000486417 STX1AQ16623 288 aa8.24□□□□□ -1.09
TMC1-204ENST00000486417 TMEM179Q6ZVK1 233 aa8.24□□□□□ -1.09
TMC1-204ENST00000486417 HOMER1Q86YM7 354 aa8.24□□□□□ -1.09
TMC1-204ENST00000486417 FAM151AQ8WW52 585 aa8.24□□□□□ -1.09
TMC1-204ENST00000486417 JDP2Q8WYK2 163 aa8.24□□□□□ -1.09
TMC1-204ENST00000486417 UBA5Q9GZZ9 404 aa8.24□□□□□ -1.09
TMC1-204ENST00000486417 HERC5Q9UII4 1024 aaKnown RBP8.24□□□□□ -1.09
TMC1-204ENST00000486417 BCS1LQ9Y276 419 aa8.24□□□□□ -1.09
TMC1-204ENST00000486417 CCDC194A0A1B0GVG4 234 aa8.23□□□□□ -1.09
TMC1-204ENST00000486417 ESYT2A0FGR8 921 aa8.23□□□□□ -1.09
TMC1-204ENST00000486417 EEF2P13639 858 aaKnown RBP8.23□□□□□ -1.09
TMC1-204ENST00000486417 ATP2C1P98194 919 aaPredicted RBP8.23□□□□□ -1.09
TMC1-204ENST00000486417 RASSF7Q02833 373 aa8.23□□□□□ -1.09
TMC1-204ENST00000486417 SEPT2Q15019 361 aa8.23□□□□□ -1.09
TMC1-204ENST00000486417 ZNF174Q15697 407 aa8.23□□□□□ -1.09
TMC1-204ENST00000486417 CCDC96Q2M329 555 aa8.23□□□□□ -1.09
TMC1-204ENST00000486417 ABCB5Q2M3G0 1257 aa8.23□□□□□ -1.09
TMC1-204ENST00000486417 GPATCH4Q5T3I0 446 aaKnown RBP8.23□□□□□ -1.09
TMC1-204ENST00000486417 FKBP1CQ5VVH2 108 aa8.23□□□□□ -1.09
TMC1-204ENST00000486417 PPP1R18Q6NYC8 613 aa8.23□□□□□ -1.09
TMC1-204ENST00000486417 RASGRP4Q8TDF6 673 aa8.23□□□□□ -1.09
TMC1-204ENST00000486417 DCAF4Q8WV16 495 aa8.23□□□□□ -1.09
TMC1-204ENST00000486417 MKL1Q969V6 931 aa8.23□□□□□ -1.09
TMC1-204ENST00000486417 ZMYND12Q9H0C1 365 aa8.23□□□□□ -1.09
TMC1-204ENST00000486417 DNAJC25Q9H1X3 360 aa8.23□□□□□ -1.09
TMC1-204ENST00000486417 KANSL2Q9H9L4 492 aa8.23□□□□□ -1.09
TMC1-204ENST00000486417 VEZTQ9HBM0 779 aa8.23□□□□□ -1.09
TMC1-204ENST00000486417 CBX8Q9HC52 389 aa8.23□□□□□ -1.09
TMC1-204ENST00000486417 FAM13BQ9NYF5 915 aa8.23□□□□□ -1.09
TMC1-204ENST00000486417 PCDHA6Q9UN73 950 aa8.23□□□□□ -1.09
TMC1-204ENST00000486417 KIAA1024Q9UPX6 916 aa8.23□□□□□ -1.09
TMC1-204ENST00000486417 PCDHA8Q9Y5H6 950 aa8.23□□□□□ -1.09
TMC1-204ENST00000486417 DOCK1Q14185 1865 aa8.22□□□□□ -1.09
TMC1-204ENST00000486417 ELOAQ14241 798 aaKnown RBP8.22□□□□□ -1.09
TMC1-204ENST00000486417 RRP1BQ14684 758 aaKnown RBP8.22□□□□□ -1.09
TMC1-204ENST00000486417 TNIP1Q15025 636 aa8.22□□□□□ -1.09
TMC1-204ENST00000486417 SPECC1Q5M775 1068 aa8.22□□□□□ -1.09
TMC1-204ENST00000486417 TTBK2Q6IQ55 1244 aa8.22□□□□□ -1.09
TMC1-204ENST00000486417 PHLDB3Q6NSJ2 640 aa8.22□□□□□ -1.09
TMC1-204ENST00000486417 KRBA2Q6ZNG9 492 aa8.22□□□□□ -1.09
TMC1-204ENST00000486417 C11orf57Q6ZUT1 292 aaPredicted RBP8.22□□□□□ -1.09
TMC1-204ENST00000486417 KCTD1Q719H9 257 aa8.22□□□□□ -1.09
TMC1-204ENST00000486417 FAM83AQ86UY5 434 aa8.22□□□□□ -1.09
TMC1-204ENST00000486417 ERCC4Q92889 916 aaPredicted RBP8.22□□□□□ -1.09
TMC1-204ENST00000486417 FERMT2Q96AC1 680 aa8.22□□□□□ -1.09
TMC1-204ENST00000486417 SDF4Q9BRK5 362 aa8.22□□□□□ -1.09
TMC1-204ENST00000486417 CSRNP2Q9H175 543 aa8.22□□□□□ -1.09
TMC1-204ENST00000486417 JMJD4Q9H9V9 463 aa8.22□□□□□ -1.09
TMC1-204ENST00000486417 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.22□□□□□ -1.09
TMC1-204ENST00000486417 VAT1LQ9HCJ6 419 aa8.22□□□□□ -1.09
TMC1-204ENST00000486417 C6orf50Q9HD87 102 aa8.22□□□□□ -1.09
TMC1-204ENST00000486417 MYOZ2Q9NPC6 264 aa8.22□□□□□ -1.09
TMC1-204ENST00000486417 USP25Q9UHP3 1055 aa8.22□□□□□ -1.09
TMC1-204ENST00000486417 KCNH3Q9ULD8 1083 aa8.22□□□□□ -1.09
TMC1-204ENST00000486417 GNEQ9Y223 722 aaKnown RBP8.22□□□□□ -1.09
TMC1-204ENST00000486417 SHTN1A0MZ66 631 aa8.21□□□□□ -1.1
TMC1-204ENST00000486417 SMCO2A6NFE2 343 aa8.21□□□□□ -1.1
TMC1-204ENST00000486417 RNF223E7ERA6 249 aa8.21□□□□□ -1.1
TMC1-204ENST00000486417 WNT10BO00744 389 aa8.21□□□□□ -1.1
TMC1-204ENST00000486417 MYO1BO43795 1136 aa8.21□□□□□ -1.1
TMC1-204ENST00000486417 CAVIN2O95810 425 aa8.21□□□□□ -1.1
TMC1-204ENST00000486417 GH2P01242 217 aa8.21□□□□□ -1.1
TMC1-204ENST00000486417 RPS12P25398 132 aaKnown RBP8.21□□□□□ -1.1
TMC1-204ENST00000486417 GNA11P29992 359 aa8.21□□□□□ -1.1
TMC1-204ENST00000486417 MCM7P33993 719 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms