RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 WNT8BQ93098 351 aa8.19□□□□□ -1.1
TMEM39A-209ENST00000486235 OPTNQ96CV9 577 aa8.19□□□□□ -1.1
TMEM39A-209ENST00000486235 ZNF333Q96JL9 665 aa8.19□□□□□ -1.1
TMEM39A-209ENST00000486235 STK31Q9BXU1 1019 aa8.19□□□□□ -1.1
TMEM39A-209ENST00000486235 OSGEPQ9NPF4 335 aa8.19□□□□□ -1.1
TMEM39A-209ENST00000486235 PTCH2Q9Y6C5 1203 aa8.19□□□□□ -1.1
TMEM39A-209ENST00000486235 ANKRD18BA2A2Z9 1011 aa8.18□□□□□ -1.1
TMEM39A-209ENST00000486235 MAP4P27816 1152 aaKnown RBP8.18□□□□□ -1.1
TMEM39A-209ENST00000486235 GCKRQ14397 625 aa8.18□□□□□ -1.1
TMEM39A-209ENST00000486235 TAF1CQ15572 869 aaPredicted RBP8.18□□□□□ -1.1
TMEM39A-209ENST00000486235 SLC9C1Q4G0N8 1177 aa8.18□□□□□ -1.1
TMEM39A-209ENST00000486235 ANKRD13AQ8IZ07 590 aa8.18□□□□□ -1.1
TMEM39A-209ENST00000486235 C12orf50Q8NA57 414 aaPredicted RBP8.18□□□□□ -1.1
TMEM39A-209ENST00000486235 BRI3BPQ8WY22 251 aa8.18□□□□□ -1.1
TMEM39A-209ENST00000486235 CLP1Q92989 425 aaKnown RBP8.18□□□□□ -1.1
TMEM39A-209ENST00000486235 TSR2Q969E8 191 aaKnown RBP8.18□□□□□ -1.1
TMEM39A-209ENST00000486235 PLA2G12BQ9BX93 195 aa8.18□□□□□ -1.1
TMEM39A-209ENST00000486235 MYH3P11055 1940 aa8.17□□□□□ -1.1
TMEM39A-209ENST00000486235 CCL15-CCL14A0A0B4J2E2 113 aa8.17□□□□□ -1.1
TMEM39A-209ENST00000486235 H0YGN5 161 aa8.17□□□□□ -1.1
TMEM39A-209ENST00000486235 PLIN1O60240 522 aa8.17□□□□□ -1.1
TMEM39A-209ENST00000486235 CSF1RP07333 972 aa8.17□□□□□ -1.1
TMEM39A-209ENST00000486235 ARL4DP49703 201 aa8.17□□□□□ -1.1
TMEM39A-209ENST00000486235 CASP7P55210 303 aa8.17□□□□□ -1.1
TMEM39A-209ENST00000486235 C19orf57Q0VDD7 668 aa8.17□□□□□ -1.1
TMEM39A-209ENST00000486235 CCL15Q16663 113 aa8.17□□□□□ -1.1
TMEM39A-209ENST00000486235 ZNF804AQ7Z570 1209 aa8.17□□□□□ -1.1
TMEM39A-209ENST00000486235 SHISA5Q8N114 240 aa8.17□□□□□ -1.1
TMEM39A-209ENST00000486235 SH3TC2Q8TF17 1288 aa8.17□□□□□ -1.1
TMEM39A-209ENST00000486235 USP26Q9BXU7 913 aa8.17□□□□□ -1.1
TMEM39A-209ENST00000486235 CHMP4AQ9BY43 222 aa8.17□□□□□ -1.1
TMEM39A-209ENST00000486235 ZFYVE28Q9HCC9 887 aa8.17□□□□□ -1.1
TMEM39A-209ENST00000486235 IRS2Q9Y4H2 1338 aa8.17□□□□□ -1.1
TMEM39A-209ENST00000486235 UNCXA6NJT0 531 aa8.16□□□□□ -1.1
TMEM39A-209ENST00000486235 TCP10L2B9ZVM9 353 aa8.16□□□□□ -1.1
TMEM39A-209ENST00000486235 IL1R1P14778 569 aa8.16□□□□□ -1.1
TMEM39A-209ENST00000486235 IFIT5Q13325 482 aaKnown RBP8.16□□□□□ -1.1
TMEM39A-209ENST00000486235 VGLL4Q14135 290 aa8.16□□□□□ -1.1
TMEM39A-209ENST00000486235 C15orf52Q6ZUT6 534 aaKnown RBP8.16□□□□□ -1.1
TMEM39A-209ENST00000486235 RBBP6Q7Z6E9 1792 aaKnown RBP8.16□□□□□ -1.1
TMEM39A-209ENST00000486235 FAM43AQ8N2R8 423 aa8.16□□□□□ -1.1
TMEM39A-209ENST00000486235 ARHGAP39Q9C0H5 1083 aa8.16□□□□□ -1.1
TMEM39A-209ENST00000486235 MYH16Q9H6N6 1097 aa8.16□□□□□ -1.1
TMEM39A-209ENST00000486235 TDRD3Q9H7E2 651 aaKnown RBP8.16□□□□□ -1.1
TMEM39A-209ENST00000486235 ZNF70Q9UC06 446 aaPredicted RBP8.16□□□□□ -1.1
TMEM39A-209ENST00000486235 ADGRE2Q9UHX3 823 aa8.16□□□□□ -1.1
TMEM39A-209ENST00000486235 SOX13Q9UN79 622 aa8.16□□□□□ -1.1
TMEM39A-209ENST00000486235 TTF2Q9UNY4 1162 aaKnown RBP8.16□□□□□ -1.1
TMEM39A-209ENST00000486235 SOX1O00570 391 aaPredicted RBP8.15□□□□□ -1.1
TMEM39A-209ENST00000486235 GTF2A2P52657 109 aa8.15□□□□□ -1.1
TMEM39A-209ENST00000486235 FKBP1AP62942 108 aaKnown RBP8.15□□□□□ -1.1
TMEM39A-209ENST00000486235 TNFAIP1Q13829 316 aa8.15□□□□□ -1.1
TMEM39A-209ENST00000486235 ARHGEF6Q15052 776 aa8.15□□□□□ -1.1
TMEM39A-209ENST00000486235 TWISTNBQ3B726 338 aaPredicted RBP8.15□□□□□ -1.1
TMEM39A-209ENST00000486235 MFSD14BQ5SR56 506 aa8.15□□□□□ -1.1
TMEM39A-209ENST00000486235 ABI1Q8IZP0 508 aa8.15□□□□□ -1.1
TMEM39A-209ENST00000486235 TTC16Q8NEE8 873 aa8.15□□□□□ -1.1
TMEM39A-209ENST00000486235 DNAAF4Q8WXU2 420 aa8.15□□□□□ -1.1
TMEM39A-209ENST00000486235 TEPSINQ96N21 525 aa8.15□□□□□ -1.1
TMEM39A-209ENST00000486235 OSMRQ99650 979 aa8.15□□□□□ -1.1
TMEM39A-209ENST00000486235 TMEM39BQ9GZU3 492 aa8.15□□□□□ -1.1
TMEM39A-209ENST00000486235 CHRDQ9H2X0 955 aa8.15□□□□□ -1.1
TMEM39A-209ENST00000486235 HIF3AQ9Y2N7 669 aa8.15□□□□□ -1.1
TMEM39A-209ENST00000486235 HTTP42858 3142 aa8.14□□□□□ -1.11
TMEM39A-209ENST00000486235 OTOFQ9HC10 1997 aa8.14□□□□□ -1.11
TMEM39A-209ENST00000486235 PDGFAP04085 211 aa8.14□□□□□ -1.11
TMEM39A-209ENST00000486235 F13BP05160 661 aa8.14□□□□□ -1.11
TMEM39A-209ENST00000486235 DRD2P14416 443 aa8.14□□□□□ -1.11
TMEM39A-209ENST00000486235 PCSK2P16519 638 aa8.14□□□□□ -1.11
TMEM39A-209ENST00000486235 GYG1P46976 350 aa8.14□□□□□ -1.11
TMEM39A-209ENST00000486235 CACNB3P54284 484 aa8.14□□□□□ -1.11
TMEM39A-209ENST00000486235 FOXO4P98177 505 aa8.14□□□□□ -1.11
TMEM39A-209ENST00000486235 IKBKEQ14164 716 aa8.14□□□□□ -1.11
TMEM39A-209ENST00000486235 TAF7LQ5H9L4 462 aa8.14□□□□□ -1.11
TMEM39A-209ENST00000486235 EPHA10Q5JZY3 1008 aa8.14□□□□□ -1.11
TMEM39A-209ENST00000486235 TMCO4Q5TGY1 634 aa8.14□□□□□ -1.11
TMEM39A-209ENST00000486235 LINS1Q8NG48 757 aa8.14□□□□□ -1.11
TMEM39A-209ENST00000486235 CNNM1Q9NRU3 951 aa8.14□□□□□ -1.11
TMEM39A-209ENST00000486235 CSADQ9Y600 493 aa8.14□□□□□ -1.11
TMEM39A-209ENST00000486235 MKI67P46013 3256 aaKnown RBP8.13□□□□□ -1.11
TMEM39A-209ENST00000486235 ECM29Q5VYK3 1845 aa8.13□□□□□ -1.11
TMEM39A-209ENST00000486235 LAMB1P07942 1786 aa8.13□□□□□ -1.11
TMEM39A-209ENST00000486235 FAM205AQ6ZU69 1335 aa8.13□□□□□ -1.11
TMEM39A-209ENST00000486235 MEGF11A6BM72 1044 aa8.13□□□□□ -1.11
TMEM39A-209ENST00000486235 F6X3S4 739 aa8.13□□□□□ -1.11
TMEM39A-209ENST00000486235 WDHD1O75717 1129 aaPredicted RBP8.13□□□□□ -1.11
TMEM39A-209ENST00000486235 DLGAP3O95886 979 aa8.13□□□□□ -1.11
TMEM39A-209ENST00000486235 RPLP1P05386 114 aaKnown RBP8.13□□□□□ -1.11
TMEM39A-209ENST00000486235 CRKP46108 304 aa8.13□□□□□ -1.11
TMEM39A-209ENST00000486235 TNNI2P48788 182 aa8.13□□□□□ -1.11
TMEM39A-209ENST00000486235 LACTBP83111 547 aaPredicted RBP8.13□□□□□ -1.11
TMEM39A-209ENST00000486235 KIF22Q14807 665 aa8.13□□□□□ -1.11
TMEM39A-209ENST00000486235 NFKBIBQ15653 356 aa8.13□□□□□ -1.11
TMEM39A-209ENST00000486235 LMBR1LQ6UX01 489 aa8.13□□□□□ -1.11
TMEM39A-209ENST00000486235 XKR5Q6UX68 686 aa8.13□□□□□ -1.11
TMEM39A-209ENST00000486235 LDHAL6AQ6ZMR3 332 aa8.13□□□□□ -1.11
TMEM39A-209ENST00000486235 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.13□□□□□ -1.11
TMEM39A-209ENST00000486235 ASAP3Q8TDY4 903 aa8.13□□□□□ -1.11
TMEM39A-209ENST00000486235 DPF3Q92784 378 aa8.13□□□□□ -1.11
TMEM39A-209ENST00000486235 NXPE3Q969Y0 559 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms