RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 FAM186AA6NE01 2351 aa10.01□□□□□ -0.81
XRN1-212ENST00000486211 ATP2A1O14983 1001 aa10.01□□□□□ -0.81
XRN1-212ENST00000486211 DYNC1LI2O43237 492 aaPredicted RBP10.01□□□□□ -0.81
XRN1-212ENST00000486211 ZEB2O60315 1214 aa10.01□□□□□ -0.81
XRN1-212ENST00000486211 MLLT3P42568 568 aaPredicted RBP10.01□□□□□ -0.81
XRN1-212ENST00000486211 MTX1Q13505 466 aa10.01□□□□□ -0.81
XRN1-212ENST00000486211 TCTN1Q2MV58 587 aa10.01□□□□□ -0.81
XRN1-212ENST00000486211 TIGD5Q53EQ6 642 aa10.01□□□□□ -0.81
XRN1-212ENST00000486211 TCEAL5Q5H9L2 206 aa10.01□□□□□ -0.81
XRN1-212ENST00000486211 FAM83BQ5T0W9 1011 aa10.01□□□□□ -0.81
XRN1-212ENST00000486211 NOL8Q76FK4 1167 aaKnown RBP10.01□□□□□ -0.81
XRN1-212ENST00000486211 RAD9AQ99638 391 aa10.01□□□□□ -0.81
XRN1-212ENST00000486211 MEIS3Q99687 375 aa10.01□□□□□ -0.81
XRN1-212ENST00000486211 RIOK1Q9BRS2 568 aaKnown RBP10.01□□□□□ -0.81
XRN1-212ENST00000486211 C17orf80Q9BSJ5 609 aa10.01□□□□□ -0.81
XRN1-212ENST00000486211 AP5M1Q9H0R1 490 aa10.01□□□□□ -0.81
XRN1-212ENST00000486211 IRF2BPLQ9H1B7 796 aa10.01□□□□□ -0.81
XRN1-212ENST00000486211 EPG5Q9HCE0 2579 aa10□□□□□ -0.81
XRN1-212ENST00000486211 MED19A0JLT2 244 aaPredicted RBP10□□□□□ -0.81
XRN1-212ENST00000486211 RBAK-RBAKDNI3L0D1 243 aa10□□□□□ -0.81
XRN1-212ENST00000486211 SRGAP3O43295 1099 aa10□□□□□ -0.81
XRN1-212ENST00000486211 POLR3DP05423 398 aaPredicted RBP10□□□□□ -0.81
XRN1-212ENST00000486211 CYP2D6P10635 497 aa10□□□□□ -0.81
XRN1-212ENST00000486211 ZXDAP98168 799 aa10□□□□□ -0.81
XRN1-212ENST00000486211 CNTN2Q02246 1040 aa10□□□□□ -0.81
XRN1-212ENST00000486211 TTC39AQ5SRH9 613 aa10□□□□□ -0.81
XRN1-212ENST00000486211 FAM133AQ8N9E0 248 aa10□□□□□ -0.81
XRN1-212ENST00000486211 BANK1Q8NDB2 785 aa10□□□□□ -0.81
XRN1-212ENST00000486211 ZNF512BQ96KM6 892 aaPredicted RBP10□□□□□ -0.81
XRN1-212ENST00000486211 POP1Q99575 1024 aaKnown RBP10□□□□□ -0.81
XRN1-212ENST00000486211 DBNDD2Q9BQY9 259 aa10□□□□□ -0.81
XRN1-212ENST00000486211 FSD1Q9BTV5 496 aa10□□□□□ -0.81
XRN1-212ENST00000486211 PDGFCQ9NRA1 345 aa10□□□□□ -0.81
XRN1-212ENST00000486211 Q9Y3F1 56 aa10□□□□□ -0.81
XRN1-212ENST00000486211 DDX49Q9Y6V7 483 aaKnown RBP10□□□□□ -0.81
XRN1-212ENST00000486211 SCN10AQ9Y5Y9 1956 aa10□□□□□ -0.81
XRN1-212ENST00000486211 ZFHX4Q86UP3 3567 aa10□□□□□ -0.81
XRN1-212ENST00000486211 H0Y858 1186 aa9.99□□□□□ -0.81
XRN1-212ENST00000486211 MBTPS2O43462 519 aa9.99□□□□□ -0.81
XRN1-212ENST00000486211 EEF2P13639 858 aaKnown RBP9.99□□□□□ -0.81
XRN1-212ENST00000486211 AVPR2P30518 371 aa9.99□□□□□ -0.81
XRN1-212ENST00000486211 PURAQ00577 322 aaKnown RBP9.99□□□□□ -0.81
XRN1-212ENST00000486211 DLX2Q07687 328 aaPredicted RBP9.99□□□□□ -0.81
XRN1-212ENST00000486211 CTC1Q2NKJ3 1217 aa9.99□□□□□ -0.81
XRN1-212ENST00000486211 TAPT1Q6NXT6 567 aa9.99□□□□□ -0.81
XRN1-212ENST00000486211 PPP1R18Q6NYC8 613 aa9.99□□□□□ -0.81
XRN1-212ENST00000486211 RPAINQ86UA6 219 aa9.99□□□□□ -0.81
XRN1-212ENST00000486211 ANKRD35Q8N283 1001 aa9.99□□□□□ -0.81
XRN1-212ENST00000486211 TTC13Q8NBP0 860 aa9.99□□□□□ -0.81
XRN1-212ENST00000486211 RETREG2Q8NC44 543 aa9.99□□□□□ -0.81
XRN1-212ENST00000486211 DYNLL2Q96FJ2 89 aa9.99□□□□□ -0.81
XRN1-212ENST00000486211 SLF1Q9BQI6 1058 aa9.99□□□□□ -0.81
XRN1-212ENST00000486211 PRKD2Q9BZL6 878 aa9.99□□□□□ -0.81
XRN1-212ENST00000486211 TLR9Q9NR96 1032 aa9.99□□□□□ -0.81
XRN1-212ENST00000486211 CLDND1Q9NY35 253 aa9.99□□□□□ -0.81
XRN1-212ENST00000486211 CTNNA3Q9UI47 895 aa9.99□□□□□ -0.81
XRN1-212ENST00000486211 GVINP1Q7Z2Y8 2422 aa9.98□□□□□ -0.81
XRN1-212ENST00000486211 MYH8P13535 1937 aa9.98□□□□□ -0.81
XRN1-212ENST00000486211 ATG2AQ2TAZ0 1938 aa9.98□□□□□ -0.81
XRN1-212ENST00000486211 IDH1O75874 414 aaKnown RBP9.98□□□□□ -0.81
XRN1-212ENST00000486211 NBL1P41271 181 aa9.98□□□□□ -0.81
XRN1-212ENST00000486211 PTPROQ16827 1216 aa9.98□□□□□ -0.81
XRN1-212ENST00000486211 LRRFIP1Q32MZ4 808 aaKnown RBP9.98□□□□□ -0.81
XRN1-212ENST00000486211 NBPF20Q3BBV1 942 aa9.98□□□□□ -0.81
XRN1-212ENST00000486211 PADI6Q6TGC4 694 aa9.98□□□□□ -0.81
XRN1-212ENST00000486211 EP400NLQ6ZTU2 488 aa9.98□□□□□ -0.81
XRN1-212ENST00000486211 CPXCR1Q8N123 301 aa9.98□□□□□ -0.81
XRN1-212ENST00000486211 PPP1R13LQ8WUF5 828 aa9.98□□□□□ -0.81
XRN1-212ENST00000486211 ZNF516Q92618 1163 aa9.98□□□□□ -0.81
XRN1-212ENST00000486211 ASIC4Q96FT7 647 aa9.98□□□□□ -0.81
XRN1-212ENST00000486211 CTAGE1Q96RT6 745 aa9.98□□□□□ -0.81
XRN1-212ENST00000486211 NUP88Q99567 741 aaPredicted RBP9.98□□□□□ -0.81
XRN1-212ENST00000486211 NSUN3Q9H649 340 aaKnown RBP9.98□□□□□ -0.81
XRN1-212ENST00000486211 NPDC1Q9NQX5 325 aaPredicted RBP9.98□□□□□ -0.81
XRN1-212ENST00000486211 MCM9Q9NXL9 1143 aa9.98□□□□□ -0.81
XRN1-212ENST00000486211 SWAP70Q9UH65 585 aa9.98□□□□□ -0.81
XRN1-212ENST00000486211 HDAC5Q9UQL6 1122 aa9.98□□□□□ -0.81
XRN1-212ENST00000486211 DMDP11532 3685 aa9.97□□□□□ -0.81
XRN1-212ENST00000486211 H3BNC9 293 aa9.97□□□□□ -0.81
XRN1-212ENST00000486211 CXCL10P02778 98 aa9.97□□□□□ -0.81
XRN1-212ENST00000486211 SLC4A3P48751 1232 aa9.97□□□□□ -0.81
XRN1-212ENST00000486211 SMAD4Q13485 552 aaKnown RBP9.97□□□□□ -0.81
XRN1-212ENST00000486211 BFSP2Q13515 415 aa9.97□□□□□ -0.81
XRN1-212ENST00000486211 CLUL1Q15846 466 aa9.97□□□□□ -0.81
XRN1-212ENST00000486211 EPC2Q52LR7 807 aa9.97□□□□□ -0.81
XRN1-212ENST00000486211 CCDC158Q5M9N0 1113 aa9.97□□□□□ -0.81
XRN1-212ENST00000486211 SWT1Q5T5J6 900 aaKnown RBP9.97□□□□□ -0.81
XRN1-212ENST00000486211 IQSEC1Q6DN90 963 aa9.97□□□□□ -0.81
XRN1-212ENST00000486211 CNKSR3Q6P9H4 555 aa9.97□□□□□ -0.81
XRN1-212ENST00000486211 FBXO16Q8IX29 292 aaPredicted RBP9.97□□□□□ -0.81
XRN1-212ENST00000486211 CHST13Q8NET6 341 aa9.97□□□□□ -0.81
XRN1-212ENST00000486211 SLC38A10Q9HBR0 1119 aa9.97□□□□□ -0.81
XRN1-212ENST00000486211 RAVER2Q9HCJ3 691 aaKnown RBP9.97□□□□□ -0.81
XRN1-212ENST00000486211 GOPCQ9HD26 462 aa9.97□□□□□ -0.81
XRN1-212ENST00000486211 DCP1AQ9NPI6 582 aaPredicted RBP9.97□□□□□ -0.81
XRN1-212ENST00000486211 GPR108Q9NPR9 543 aa9.97□□□□□ -0.81
XRN1-212ENST00000486211 POLR3EQ9NVU0 708 aa9.97□□□□□ -0.81
XRN1-212ENST00000486211 FBXO40Q9UH90 709 aa9.97□□□□□ -0.81
XRN1-212ENST00000486211 ABHD14A-ACY1A0A1B0GW23 586 aa9.96□□□□□ -0.82
XRN1-212ENST00000486211 ASB14A6NK59 587 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms