RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.83□□□□□ -1.32
GCFC2-209ENST00000486016 NPHP3-ACAD11A0A0J9YXS1 232 aa6.82□□□□□ -1.32
GCFC2-209ENST00000486016 PRICKLE3O43900 615 aaPredicted RBP6.82□□□□□ -1.32
GCFC2-209ENST00000486016 SLC9A5Q14940 896 aa6.82□□□□□ -1.32
GCFC2-209ENST00000486016 PEX11GQ96HA9 241 aa6.82□□□□□ -1.32
GCFC2-209ENST00000486016 MRGPRX3Q96LB0 322 aa6.82□□□□□ -1.32
GCFC2-209ENST00000486016 NOX5Q96PH1 765 aa6.82□□□□□ -1.32
GCFC2-209ENST00000486016 MMP19Q99542 508 aa6.82□□□□□ -1.32
GCFC2-209ENST00000486016 BDH2Q9BUT1 245 aa6.82□□□□□ -1.32
GCFC2-209ENST00000486016 TGIF2Q9GZN2 237 aa6.82□□□□□ -1.32
GCFC2-209ENST00000486016 ACBD3Q9H3P7 528 aa6.82□□□□□ -1.32
GCFC2-209ENST00000486016 DBR1Q9UK59 544 aaKnown RBP6.82□□□□□ -1.32
GCFC2-209ENST00000486016 AKT3Q9Y243 479 aa6.82□□□□□ -1.32
GCFC2-209ENST00000486016 MYRFQ9Y2G1 1151 aa6.82□□□□□ -1.32
GCFC2-209ENST00000486016 TRBV23OR9-2A0A075B6M9 112 aa6.81□□□□□ -1.32
GCFC2-209ENST00000486016 ZNF143P52747 638 aaPredicted RBP6.81□□□□□ -1.32
GCFC2-209ENST00000486016 CACNB2Q08289 660 aaPredicted RBP6.81□□□□□ -1.32
GCFC2-209ENST00000486016 WWC2Q6AWC2 1192 aa6.81□□□□□ -1.32
GCFC2-209ENST00000486016 BVESQ8NE79 360 aa6.81□□□□□ -1.32
GCFC2-209ENST00000486016 SPATA25Q9BR10 227 aa6.81□□□□□ -1.32
GCFC2-209ENST00000486016 SPATA6Q9NWH7 488 aaPredicted RBP6.81□□□□□ -1.32
GCFC2-209ENST00000486016 CLEC1BQ9P126 229 aa6.81□□□□□ -1.32
GCFC2-209ENST00000486016 SUGT1Q9Y2Z0 365 aa6.81□□□□□ -1.32
GCFC2-209ENST00000486016 ARNTLO00327 626 aa6.8□□□□□ -1.32
GCFC2-209ENST00000486016 KCNH1O95259 989 aa6.8□□□□□ -1.32
GCFC2-209ENST00000486016 ZBTB7AO95365 584 aa6.8□□□□□ -1.32
GCFC2-209ENST00000486016 PLS3P13797 630 aa6.8□□□□□ -1.32
GCFC2-209ENST00000486016 CABP7Q86V35 215 aa6.8□□□□□ -1.32
GCFC2-209ENST00000486016 CPLX3Q8WVH0 158 aa6.8□□□□□ -1.32
GCFC2-209ENST00000486016 GPR20Q99678 358 aa6.8□□□□□ -1.32
GCFC2-209ENST00000486016 APBA2Q99767 749 aa6.8□□□□□ -1.32
GCFC2-209ENST00000486016 GPRC5CQ9NQ84 441 aa6.8□□□□□ -1.32
GCFC2-209ENST00000486016 STRIP2Q9ULQ0 834 aa6.8□□□□□ -1.32
GCFC2-209ENST00000486016 FAN1Q9Y2M0 1017 aa6.8□□□□□ -1.32
GCFC2-209ENST00000486016 SIT1Q9Y3P8 196 aa6.8□□□□□ -1.32
GCFC2-209ENST00000486016 SUV39H1O43463 412 aa6.79□□□□□ -1.32
GCFC2-209ENST00000486016 NOBOXO60393 691 aa6.79□□□□□ -1.32
GCFC2-209ENST00000486016 NPHS1O60500 1241 aa6.79□□□□□ -1.32
GCFC2-209ENST00000486016 NTRK1P04629 796 aa6.79□□□□□ -1.32
GCFC2-209ENST00000486016 SCRN1Q12765 414 aa6.79□□□□□ -1.32
GCFC2-209ENST00000486016 RTP5Q14D33 572 aa6.79□□□□□ -1.32
GCFC2-209ENST00000486016 INF2Q27J81 1249 aa6.79□□□□□ -1.32
GCFC2-209ENST00000486016 GTF2IRD2BQ6EKJ0 949 aa6.79□□□□□ -1.32
GCFC2-209ENST00000486016 GTF2IRD2Q86UP8 949 aa6.79□□□□□ -1.32
GCFC2-209ENST00000486016 TRIM59Q8IWR1 403 aa6.79□□□□□ -1.32
GCFC2-209ENST00000486016 LINC00482Q8N8I6 264 aa6.79□□□□□ -1.32
GCFC2-209ENST00000486016 SMARCC2Q8TAQ2 1214 aa6.79□□□□□ -1.32
GCFC2-209ENST00000486016 NPLOC4Q8TAT6 608 aa6.79□□□□□ -1.32
GCFC2-209ENST00000486016 FRS2Q8WU20 508 aa6.79□□□□□ -1.32
GCFC2-209ENST00000486016 CYP26B1Q9NR63 512 aa6.79□□□□□ -1.32
GCFC2-209ENST00000486016 NUDT5Q9UKK9 219 aa6.79□□□□□ -1.32
GCFC2-209ENST00000486016 FUCA1P04066 466 aa6.78□□□□□ -1.32
GCFC2-209ENST00000486016 THBDP07204 575 aa6.78□□□□□ -1.32
GCFC2-209ENST00000486016 ATF4P18848 351 aaPredicted RBP6.78□□□□□ -1.32
GCFC2-209ENST00000486016 NCAPHQ15003 741 aa6.78□□□□□ -1.32
GCFC2-209ENST00000486016 CARFQ8N187 725 aa6.78□□□□□ -1.32
GCFC2-209ENST00000486016 LGR4Q9BXB1 951 aa6.78□□□□□ -1.32
GCFC2-209ENST00000486016 NKX2-4Q9H2Z4 354 aa6.78□□□□□ -1.32
GCFC2-209ENST00000486016 CNOT11Q9UKZ1 510 aaKnown RBP6.78□□□□□ -1.32
GCFC2-209ENST00000486016 SGSM2O43147 1006 aa6.77□□□□□ -1.33
GCFC2-209ENST00000486016 AKAP8O43823 692 aaKnown RBP6.77□□□□□ -1.33
GCFC2-209ENST00000486016 C8BP07358 591 aa6.77□□□□□ -1.33
GCFC2-209ENST00000486016 NT5DC1Q5TFE4 455 aa6.77□□□□□ -1.33
GCFC2-209ENST00000486016 POMZP3Q6PJE2 187 aa6.77□□□□□ -1.33
GCFC2-209ENST00000486016 INPP5FQ9Y2H2 1132 aa6.77□□□□□ -1.33
GCFC2-209ENST00000486016 DUSP10Q9Y6W6 482 aa6.77□□□□□ -1.33
GCFC2-209ENST00000486016 CAPNS1P04632 268 aa6.76□□□□□ -1.33
GCFC2-209ENST00000486016 KRTAP1-1Q07627 177 aa6.76□□□□□ -1.33
GCFC2-209ENST00000486016 HHIPL2Q6UWX4 724 aa6.76□□□□□ -1.33
GCFC2-209ENST00000486016 MIB1Q86YT6 1006 aa6.76□□□□□ -1.33
GCFC2-209ENST00000486016 CCDC103Q8IW40 242 aa6.76□□□□□ -1.33
GCFC2-209ENST00000486016 Q8N1Y9 231 aa6.76□□□□□ -1.33
GCFC2-209ENST00000486016 USP33Q8TEY7 942 aa6.76□□□□□ -1.33
GCFC2-209ENST00000486016 ANAPC16Q96DE5 110 aa6.76□□□□□ -1.33
GCFC2-209ENST00000486016 SYT3Q9BQG1 590 aa6.76□□□□□ -1.33
GCFC2-209ENST00000486016 TBX1O43435 398 aa6.75□□□□□ -1.33
GCFC2-209ENST00000486016 RBM10P98175 930 aaKnown RBP6.75□□□□□ -1.33
GCFC2-209ENST00000486016 TESK1Q15569 626 aa6.75□□□□□ -1.33
GCFC2-209ENST00000486016 ZNF761Q86XN6 746 aaPredicted RBP6.75□□□□□ -1.33
GCFC2-209ENST00000486016 CRACR2BQ8N4Y2 399 aaPredicted RBP6.75□□□□□ -1.33
GCFC2-209ENST00000486016 KREMEN2Q8NCW0 462 aa6.75□□□□□ -1.33
GCFC2-209ENST00000486016 DDX11Q96FC9 970 aa6.75□□□□□ -1.33
GCFC2-209ENST00000486016 GORASP1Q9BQQ3 440 aa6.75□□□□□ -1.33
GCFC2-209ENST00000486016 LNPKQ9C0E8 428 aa6.75□□□□□ -1.33
GCFC2-209ENST00000486016 MARCH2Q9P0N8 246 aa6.75□□□□□ -1.33
GCFC2-209ENST00000486016 TMEFF2Q9UIK5 374 aaPredicted RBP6.75□□□□□ -1.33
GCFC2-209ENST00000486016 NOP56O00567 594 aaKnown RBP6.74□□□□□ -1.33
GCFC2-209ENST00000486016 SMAD7O15105 426 aaKnown RBP6.74□□□□□ -1.33
GCFC2-209ENST00000486016 SCG5P05408 212 aa6.74□□□□□ -1.33
GCFC2-209ENST00000486016 NAT2P11245 290 aa6.74□□□□□ -1.33
GCFC2-209ENST00000486016 FERMT3Q86UX7 667 aa6.74□□□□□ -1.33
GCFC2-209ENST00000486016 DCP2Q8IU60 420 aaKnown RBP6.74□□□□□ -1.33
GCFC2-209ENST00000486016 TEX2Q8IWB9 1127 aa6.74□□□□□ -1.33
GCFC2-209ENST00000486016 ZBTB8AQ96BR9 441 aa6.74□□□□□ -1.33
GCFC2-209ENST00000486016 PALD1Q9ULE6 856 aa6.74□□□□□ -1.33
GCFC2-209ENST00000486016 C22orf46C9J442 243 aa6.73□□□□□ -1.33
GCFC2-209ENST00000486016 SLC6A11P48066 632 aa6.73□□□□□ -1.33
GCFC2-209ENST00000486016 SARSP49591 514 aaKnown RBP6.73□□□□□ -1.33
GCFC2-209ENST00000486016 C6orf15Q6UXA7 325 aaPredicted RBP6.73□□□□□ -1.33
GCFC2-209ENST00000486016 NLRP10Q86W26 655 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms