RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 TIGD5Q53EQ6 642 aa14.47□□□□□ -0.09
SSR4-210ENST00000485612 BRDTQ58F21 947 aaPredicted RBP14.47□□□□□ -0.09
SSR4-210ENST00000485612 RNF135Q8IUD6 432 aa14.47□□□□□ -0.09
SSR4-210ENST00000485612 CCDC155Q8N6L0 562 aa14.47□□□□□ -0.09
SSR4-210ENST00000485612 BANK1Q8NDB2 785 aa14.47□□□□□ -0.09
SSR4-210ENST00000485612 CAGE1Q8TC20 777 aa14.47□□□□□ -0.09
SSR4-210ENST00000485612 EDAQ92838 391 aa14.47□□□□□ -0.09
SSR4-210ENST00000485612 PBXIP1Q96AQ6 731 aa14.47□□□□□ -0.09
SSR4-210ENST00000485612 SEC62Q99442 399 aaKnown RBP14.47□□□□□ -0.09
SSR4-210ENST00000485612 WDR11Q9BZH6 1224 aa14.47□□□□□ -0.09
SSR4-210ENST00000485612 MKNK2Q9HBH9 465 aa14.47□□□□□ -0.09
SSR4-210ENST00000485612 RNF113AO15541 343 aaKnown RBP14.46□□□□□ -0.09
SSR4-210ENST00000485612 KPNA6O60684 536 aa14.46□□□□□ -0.09
SSR4-210ENST00000485612 SELPP16109 830 aa14.46□□□□□ -0.09
SSR4-210ENST00000485612 PTGISQ16647 500 aa14.46□□□□□ -0.09
SSR4-210ENST00000485612 TKFCQ3LXA3 575 aa14.46□□□□□ -0.09
SSR4-210ENST00000485612 TCEAL5Q5H9L2 206 aa14.46□□□□□ -0.09
SSR4-210ENST00000485612 OR6J1Q8NGC5 347 aa14.46□□□□□ -0.09
SSR4-210ENST00000485612 OTUD7AQ8TE49 926 aaPredicted RBP14.46□□□□□ -0.09
SSR4-210ENST00000485612 MORC4Q8TE76 937 aa14.46□□□□□ -0.09
SSR4-210ENST00000485612 POP1Q99575 1024 aaKnown RBP14.46□□□□□ -0.09
SSR4-210ENST00000485612 DCTPP1Q9H773 170 aa14.46□□□□□ -0.09
SSR4-210ENST00000485612 FAM86C1Q9NVL1 165 aa14.46□□□□□ -0.09
SSR4-210ENST00000485612 CLDND1Q9NY35 253 aa14.46□□□□□ -0.09
SSR4-210ENST00000485612 INSL6Q9Y581 213 aa14.46□□□□□ -0.09
SSR4-210ENST00000485612 PTPRSQ13332 1948 aa14.46□□□□□ -0.09
SSR4-210ENST00000485612 TET1Q8NFU7 2136 aa14.45□□□□□ -0.1
SSR4-210ENST00000485612 TMEM221A6NGB7 291 aa14.45□□□□□ -0.1
SSR4-210ENST00000485612 M0R296 226 aa14.45□□□□□ -0.1
SSR4-210ENST00000485612 EFCAB14O75071 495 aa14.45□□□□□ -0.1
SSR4-210ENST00000485612 PARNO95453 639 aaKnown RBP14.45□□□□□ -0.1
SSR4-210ENST00000485612 ALAS1P13196 640 aa14.45□□□□□ -0.1
SSR4-210ENST00000485612 TDO2P48775 406 aa14.45□□□□□ -0.1
SSR4-210ENST00000485612 CHMP4BP1P59074 171 aa14.45□□□□□ -0.1
SSR4-210ENST00000485612 IKBKEQ14164 716 aa14.45□□□□□ -0.1
SSR4-210ENST00000485612 COL19A1Q14993 1142 aa14.45□□□□□ -0.1
SSR4-210ENST00000485612 SMAD2Q15796 467 aaKnown RBP14.45□□□□□ -0.1
SSR4-210ENST00000485612 TCTN1Q2MV58 587 aa14.45□□□□□ -0.1
SSR4-210ENST00000485612 GIMAP6Q6P9H5 292 aa14.45□□□□□ -0.1
SSR4-210ENST00000485612 LRRC8DQ7L1W4 858 aa14.45□□□□□ -0.1
SSR4-210ENST00000485612 SUGP1Q8IWZ8 645 aaKnown RBP14.45□□□□□ -0.1
SSR4-210ENST00000485612 LRRC47Q8N1G4 583 aaKnown RBP14.45□□□□□ -0.1
SSR4-210ENST00000485612 MKL1Q969V6 931 aa14.45□□□□□ -0.1
SSR4-210ENST00000485612 CEP95Q96GE4 821 aa14.45□□□□□ -0.1
SSR4-210ENST00000485612 PURBQ96QR8 312 aaKnown RBP14.45□□□□□ -0.1
SSR4-210ENST00000485612 CYP39A1Q9NYL5 469 aa14.45□□□□□ -0.1
SSR4-210ENST00000485612 TANC1Q9C0D5 1861 aa14.44□□□□□ -0.1
SSR4-210ENST00000485612 TMEM232C9JQI7 657 aa14.44□□□□□ -0.1
SSR4-210ENST00000485612 NBNO60934 754 aa14.44□□□□□ -0.1
SSR4-210ENST00000485612 CXCL10P02778 98 aa14.44□□□□□ -0.1
SSR4-210ENST00000485612 BMP3P12645 472 aa14.44□□□□□ -0.1
SSR4-210ENST00000485612 EPC2Q52LR7 807 aa14.44□□□□□ -0.1
SSR4-210ENST00000485612 MUM1L1Q5H9M0 696 aa14.44□□□□□ -0.1
SSR4-210ENST00000485612 TRIM67Q6ZTA4 783 aa14.44□□□□□ -0.1
SSR4-210ENST00000485612 ATOH1Q92858 354 aaPredicted RBP14.44□□□□□ -0.1
SSR4-210ENST00000485612 CHMP4CQ96CF2 233 aa14.44□□□□□ -0.1
SSR4-210ENST00000485612 NSUN3Q9H649 340 aaKnown RBP14.44□□□□□ -0.1
SSR4-210ENST00000485612 ISY1Q9ULR0 285 aaKnown RBP14.44□□□□□ -0.1
SSR4-210ENST00000485612 RAD50Q92878 1312 aa14.43□□□□□ -0.1
SSR4-210ENST00000485612 SIP14410 1827 aa14.43□□□□□ -0.1
SSR4-210ENST00000485612 LAMA4Q16363 1823 aa14.43□□□□□ -0.1
SSR4-210ENST00000485612 RBM47A0AV96 593 aaKnown RBP14.43□□□□□ -0.1
SSR4-210ENST00000485612 H3BNC9 293 aa14.43□□□□□ -0.1
SSR4-210ENST00000485612 NCK2O43639 380 aa14.43□□□□□ -0.1
SSR4-210ENST00000485612 APPP05067 770 aa14.43□□□□□ -0.1
SSR4-210ENST00000485612 LTBRP36941 435 aa14.43□□□□□ -0.1
SSR4-210ENST00000485612 GPM6BQ13491 265 aa14.43□□□□□ -0.1
SSR4-210ENST00000485612 SLFN13Q68D06 897 aa14.43□□□□□ -0.1
SSR4-210ENST00000485612 NSMFQ6X4W1 530 aa14.43□□□□□ -0.1
SSR4-210ENST00000485612 RASGRP2Q7LDG7 609 aa14.43□□□□□ -0.1
SSR4-210ENST00000485612 IFNL3Q8IZI9 196 aa14.43□□□□□ -0.1
SSR4-210ENST00000485612 PI4K2BQ8TCG2 481 aa14.43□□□□□ -0.1
SSR4-210ENST00000485612 GPATCH3Q96I76 525 aa14.43□□□□□ -0.1
SSR4-210ENST00000485612 SAMD11Q96NU1 681 aa14.43□□□□□ -0.1
SSR4-210ENST00000485612 MTMR4Q9NYA4 1195 aa14.43□□□□□ -0.1
SSR4-210ENST00000485612 PLIN4Q96Q06 1357 aa14.43□□□□□ -0.1
SSR4-210ENST00000485612 TRIOO75962 3097 aa14.43□□□□□ -0.1
SSR4-210ENST00000485612 A6NJR5 290 aa14.42□□□□□ -0.1
SSR4-210ENST00000485612 MBTPS2O43462 519 aa14.42□□□□□ -0.1
SSR4-210ENST00000485612 STAT2P52630 851 aa14.42□□□□□ -0.1
SSR4-210ENST00000485612 CLUL1Q15846 466 aa14.42□□□□□ -0.1
SSR4-210ENST00000485612 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.42□□□□□ -0.1
SSR4-210ENST00000485612 ERMP1Q7Z2K6 904 aa14.42□□□□□ -0.1
SSR4-210ENST00000485612 RPAINQ86UA6 219 aa14.42□□□□□ -0.1
SSR4-210ENST00000485612 ZNF444Q8N0Y2 327 aaPredicted RBP14.42□□□□□ -0.1
SSR4-210ENST00000485612 FBXL6Q8N531 539 aa14.42□□□□□ -0.1
SSR4-210ENST00000485612 GMCL1P1Q8NEA9 526 aa14.42□□□□□ -0.1
SSR4-210ENST00000485612 CHURC1Q8WUH1 139 aa14.42□□□□□ -0.1
SSR4-210ENST00000485612 IRF2BPLQ9H1B7 796 aa14.42□□□□□ -0.1
SSR4-210ENST00000485612 ADD3Q9UEY8 706 aaKnown RBP14.42□□□□□ -0.1
SSR4-210ENST00000485612 PCDHB15Q9Y5E8 787 aa14.42□□□□□ -0.1
SSR4-210ENST00000485612 PATL2C9JE40 543 aaKnown RBP14.41□□□□□ -0.1
SSR4-210ENST00000485612 STXBP3O00186 592 aa14.41□□□□□ -0.1
SSR4-210ENST00000485612 NKRFO15226 690 aaKnown RBP eCLIP14.41□□□□□ -0.1
SSR4-210ENST00000485612 FOXP2O15409 715 aa14.41□□□□□ -0.1
SSR4-210ENST00000485612 ZFYP08048 801 aaPredicted RBP14.41□□□□□ -0.1
SSR4-210ENST00000485612 CKBP12277 381 aa14.41□□□□□ -0.1
SSR4-210ENST00000485612 ALDH5A1P51649 535 aaPredicted RBP14.41□□□□□ -0.1
SSR4-210ENST00000485612 HTRA4P83105 476 aaPredicted RBP14.41□□□□□ -0.1
SSR4-210ENST00000485612 IKQ13123 557 aaPredicted RBP14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms