RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 NSUN6Q8TEA1 469 aaKnown RBP22.85■■□□□ 1.25
COL6A2-208ENST00000485591 MPHOSPH6Q99547 160 aaKnown RBP22.85■■□□□ 1.25
COL6A2-208ENST00000485591 PHF20Q9BVI0 1012 aa22.85■■□□□ 1.25
COL6A2-208ENST00000485591 PXMP2Q9NR77 195 aa22.85■■□□□ 1.25
COL6A2-208ENST00000485591 KIAA1217Q5T5P2 1943 aa22.84■■□□□ 1.25
COL6A2-208ENST00000485591 EDNRBP24530 442 aa22.84■■□□□ 1.25
COL6A2-208ENST00000485591 ARMCX2Q7L311 632 aa22.84■■□□□ 1.25
COL6A2-208ENST00000485591 REXO1Q8N1G1 1221 aaKnown RBP22.84■■□□□ 1.25
COL6A2-208ENST00000485591 SH3TC2Q8TF17 1288 aa22.84■■□□□ 1.25
COL6A2-208ENST00000485591 INTS4Q96HW7 963 aaKnown RBP22.84■■□□□ 1.25
COL6A2-208ENST00000485591 PCDHA4Q9UN74 947 aa22.84■■□□□ 1.25
COL6A2-208ENST00000485591 SMC3Q9UQE7 1217 aa22.84■■□□□ 1.25
COL6A2-208ENST00000485591 KIF3AQ9Y496 699 aa22.84■■□□□ 1.25
COL6A2-208ENST00000485591 RPTORQ8N122 1335 aa22.83■■□□□ 1.25
COL6A2-208ENST00000485591 SPDYE3A6NKU9 549 aa22.83■■□□□ 1.25
COL6A2-208ENST00000485591 B4DLN1 442 aa22.83■■□□□ 1.25
COL6A2-208ENST00000485591 INHAP05111 366 aa22.83■■□□□ 1.25
COL6A2-208ENST00000485591 CYP2C19P33261 490 aa22.83■■□□□ 1.25
COL6A2-208ENST00000485591 AP3B2Q13367 1082 aa22.83■■□□□ 1.25
COL6A2-208ENST00000485591 NPY5RQ15761 445 aa22.83■■□□□ 1.25
COL6A2-208ENST00000485591 MAP3K21Q5TCX8 1036 aa22.83■■□□□ 1.25
COL6A2-208ENST00000485591 ARHGEF16Q5VV41 709 aa22.83■■□□□ 1.25
COL6A2-208ENST00000485591 MCTP2Q6DN12 878 aa22.83■■□□□ 1.25
COL6A2-208ENST00000485591 ARMC5Q96C12 935 aa22.83■■□□□ 1.25
COL6A2-208ENST00000485591 IWS1Q96ST2 819 aa22.83■■□□□ 1.25
COL6A2-208ENST00000485591 GJB4Q9NTQ9 266 aa22.83■■□□□ 1.25
COL6A2-208ENST00000485591 KCNJ14Q9UNX9 436 aa22.83■■□□□ 1.25
COL6A2-208ENST00000485591 FOSP01100 380 aaPredicted RBP22.82■■□□□ 1.24
COL6A2-208ENST00000485591 EIF2AK2P19525 551 aaKnown RBP22.82■■□□□ 1.24
COL6A2-208ENST00000485591 GJB2P29033 226 aa22.82■■□□□ 1.24
COL6A2-208ENST00000485591 TRIM32Q13049 653 aa22.82■■□□□ 1.24
COL6A2-208ENST00000485591 TRIM29Q14134 588 aa22.82■■□□□ 1.24
COL6A2-208ENST00000485591 BLIDQ8IZY5 108 aa22.82■■□□□ 1.24
COL6A2-208ENST00000485591 PDCD2LQ9BRP1 358 aa22.82■■□□□ 1.24
COL6A2-208ENST00000485591 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.82■■□□□ 1.24
COL6A2-208ENST00000485591 NRBP1Q9UHY1 535 aa22.82■■□□□ 1.24
COL6A2-208ENST00000485591 MYH7BA7E2Y1 1941 aa22.82■■□□□ 1.24
COL6A2-208ENST00000485591 FRMPD3Q5JV73 1810 aa22.81■■□□□ 1.24
COL6A2-208ENST00000485591 ADAMTS3O15072 1205 aa22.81■■□□□ 1.24
COL6A2-208ENST00000485591 SNAI1O95863 264 aaPredicted RBP22.81■■□□□ 1.24
COL6A2-208ENST00000485591 PRKAR2AP13861 404 aaKnown RBP22.81■■□□□ 1.24
COL6A2-208ENST00000485591 UBXN2AP68543 259 aa22.81■■□□□ 1.24
COL6A2-208ENST00000485591 CACNB2Q08289 660 aaPredicted RBP22.81■■□□□ 1.24
COL6A2-208ENST00000485591 PGM5Q15124 567 aa22.81■■□□□ 1.24
COL6A2-208ENST00000485591 C8orf76Q96K31 380 aa22.81■■□□□ 1.24
COL6A2-208ENST00000485591 EHMT1Q9H9B1 1298 aa22.81■■□□□ 1.24
COL6A2-208ENST00000485591 TMEM260Q9NX78 707 aa22.81■■□□□ 1.24
COL6A2-208ENST00000485591 BIN2Q9UBW5 565 aaPredicted RBP22.81■■□□□ 1.24
COL6A2-208ENST00000485591 PCDHA6Q9UN73 950 aa22.81■■□□□ 1.24
COL6A2-208ENST00000485591 PCDHA8Q9Y5H6 950 aa22.81■■□□□ 1.24
COL6A2-208ENST00000485591 HTTP42858 3142 aa22.81■■□□□ 1.24
COL6A2-208ENST00000485591 M0R2N6 131 aa22.8■■□□□ 1.24
COL6A2-208ENST00000485591 MMP1P03956 469 aa22.8■■□□□ 1.24
COL6A2-208ENST00000485591 CYBAP13498 195 aa22.8■■□□□ 1.24
COL6A2-208ENST00000485591 PDE4DQ08499 809 aa22.8■■□□□ 1.24
COL6A2-208ENST00000485591 KRT40Q6A162 431 aa22.8■■□□□ 1.24
COL6A2-208ENST00000485591 ZNF333Q96JL9 665 aa22.8■■□□□ 1.24
COL6A2-208ENST00000485591 ANO3Q9BYT9 981 aa22.8■■□□□ 1.24
COL6A2-208ENST00000485591 KATNBL1Q9H079 304 aa22.8■■□□□ 1.24
COL6A2-208ENST00000485591 ABHD16BQ9H3Z7 469 aa22.8■■□□□ 1.24
COL6A2-208ENST00000485591 CNPY2Q9Y2B0 182 aa22.8■■□□□ 1.24
COL6A2-208ENST00000485591 DDX49Q9Y6V7 483 aaKnown RBP22.8■■□□□ 1.24
COL6A2-208ENST00000485591 NR3C2P08235 984 aa22.79■■□□□ 1.24
COL6A2-208ENST00000485591 FOSBP53539 338 aa22.79■■□□□ 1.24
COL6A2-208ENST00000485591 JAKMIP3Q5VZ66 844 aa22.79■■□□□ 1.24
COL6A2-208ENST00000485591 IL31RAQ8NI17 732 aa22.79■■□□□ 1.24
COL6A2-208ENST00000485591 RASGRP4Q8TDF6 673 aa22.79■■□□□ 1.24
COL6A2-208ENST00000485591 FBXO18Q8NFZ0 1043 aa22.78■■□□□ 1.24
COL6A2-208ENST00000485591 PGBD1Q96JS3 809 aa22.78■■□□□ 1.24
COL6A2-208ENST00000485591 BRMS1Q9HCU9 246 aa22.78■■□□□ 1.24
COL6A2-208ENST00000485591 VTA1Q9NP79 307 aa22.78■■□□□ 1.24
COL6A2-208ENST00000485591 CCND2P30279 289 aa22.77■■□□□ 1.24
COL6A2-208ENST00000485591 KRT2P35908 639 aa22.77■■□□□ 1.24
COL6A2-208ENST00000485591 SREBF1P36956 1147 aa22.77■■□□□ 1.24
COL6A2-208ENST00000485591 ACVR2BQ13705 512 aa22.77■■□□□ 1.24
COL6A2-208ENST00000485591 STXBP2Q15833 593 aa22.77■■□□□ 1.24
COL6A2-208ENST00000485591 PRAMEF19Q5SWL8 479 aa22.77■■□□□ 1.24
COL6A2-208ENST00000485591 PCNX4Q63HM2 1172 aa22.77■■□□□ 1.24
COL6A2-208ENST00000485591 XRRA1Q6P2D8 792 aa22.77■■□□□ 1.24
COL6A2-208ENST00000485591 VSIG10LQ86VR7 867 aa22.77■■□□□ 1.24
COL6A2-208ENST00000485591 TRPV1Q8NER1 839 aa22.77■■□□□ 1.24
COL6A2-208ENST00000485591 HMX1Q9NP08 348 aaPredicted RBP22.77■■□□□ 1.24
COL6A2-208ENST00000485591 ZNF865P0CJ78 1059 aaPredicted RBP22.76■■□□□ 1.23
COL6A2-208ENST00000485591 MYCLP12524 364 aaPredicted RBP22.76■■□□□ 1.23
COL6A2-208ENST00000485591 GUCY1B3Q02153 619 aa22.76■■□□□ 1.23
COL6A2-208ENST00000485591 BECN1Q14457 450 aa22.76■■□□□ 1.23
COL6A2-208ENST00000485591 FBXO16Q8IX29 292 aaPredicted RBP22.76■■□□□ 1.23
COL6A2-208ENST00000485591 OXER1Q8TDS5 423 aa22.76■■□□□ 1.23
COL6A2-208ENST00000485591 ZHX1Q9UKY1 873 aaPredicted RBP22.76■■□□□ 1.23
COL6A2-208ENST00000485591 EIF3JO75822 258 aaKnown RBP22.75■■□□□ 1.23
COL6A2-208ENST00000485591 STAM2O75886 525 aa22.75■■□□□ 1.23
COL6A2-208ENST00000485591 HSP90AA1P07900 732 aaKnown RBP22.75■■□□□ 1.23
COL6A2-208ENST00000485591 CCND3P30281 292 aaPredicted RBP22.75■■□□□ 1.23
COL6A2-208ENST00000485591 MTFR1Q15390 333 aa22.75■■□□□ 1.23
COL6A2-208ENST00000485591 SAFBQ15424 915 aaKnown RBP eCLIP22.75■■□□□ 1.23
COL6A2-208ENST00000485591 EEPD1Q7L9B9 569 aa22.75■■□□□ 1.23
COL6A2-208ENST00000485591 KRT25Q7Z3Z0 450 aa22.75■■□□□ 1.23
COL6A2-208ENST00000485591 DIS3L2Q8IYB7 885 aaKnown RBP22.75■■□□□ 1.23
COL6A2-208ENST00000485591 CRYGNQ8WXF5 182 aa22.75■■□□□ 1.23
COL6A2-208ENST00000485591 UNC93B1Q9H1C4 597 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms