RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 JAKMIP3Q5VZ66 844 aa13.65□□□□□ -0.22
APTX-227ENST00000485479 MFSD14CQ5VZR4 134 aa13.65□□□□□ -0.22
APTX-227ENST00000485479 OLFML2BQ68BL8 750 aa13.65□□□□□ -0.22
APTX-227ENST00000485479 ARMC5Q96C12 935 aa13.65□□□□□ -0.22
APTX-227ENST00000485479 PNMA2Q9UL42 364 aa13.65□□□□□ -0.22
APTX-227ENST00000485479 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.65□□□□□ -0.22
APTX-227ENST00000485479 CDKL5O76039 1030 aa13.65□□□□□ -0.22
APTX-227ENST00000485479 MYCNP04198 464 aaPredicted RBP13.65□□□□□ -0.22
APTX-227ENST00000485479 CYBAP13498 195 aa13.65□□□□□ -0.22
APTX-227ENST00000485479 CUL5Q93034 780 aa13.65□□□□□ -0.22
APTX-227ENST00000485479 ZSCAN31Q96LW9 406 aaPredicted RBP13.65□□□□□ -0.22
APTX-227ENST00000485479 DEFB118Q96PH6 123 aa13.65□□□□□ -0.22
APTX-227ENST00000485479 ALG1Q9BT22 464 aa13.65□□□□□ -0.22
APTX-227ENST00000485479 PXMP2Q9NR77 195 aa13.65□□□□□ -0.22
APTX-227ENST00000485479 SH2B1Q9NRF2 756 aaPredicted RBP13.65□□□□□ -0.22
APTX-227ENST00000485479 SORBS3O60504 671 aa13.64□□□□□ -0.23
APTX-227ENST00000485479 MAP3K21Q5TCX8 1036 aa13.64□□□□□ -0.23
APTX-227ENST00000485479 CNPY2Q9Y2B0 182 aa13.64□□□□□ -0.23
APTX-227ENST00000485479 DIS3Q9Y2L1 958 aaKnown RBP13.64□□□□□ -0.23
APTX-227ENST00000485479 ZNF865P0CJ78 1059 aaPredicted RBP13.63□□□□□ -0.23
APTX-227ENST00000485479 ADCYAP1R1P41586 468 aa13.63□□□□□ -0.23
APTX-227ENST00000485479 NLRP5P59047 1200 aa13.63□□□□□ -0.23
APTX-227ENST00000485479 PGM5Q15124 567 aa13.63□□□□□ -0.23
APTX-227ENST00000485479 MAMDC4Q6UXC1 1216 aa13.63□□□□□ -0.23
APTX-227ENST00000485479 SPRYD3Q8NCJ5 442 aa13.63□□□□□ -0.23
APTX-227ENST00000485479 RGS22Q8NE09 1264 aa13.63□□□□□ -0.23
APTX-227ENST00000485479 UIMC1Q96RL1 719 aa13.63□□□□□ -0.23
APTX-227ENST00000485479 KATNBL1Q9H079 304 aa13.63□□□□□ -0.23
APTX-227ENST00000485479 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.63□□□□□ -0.23
APTX-227ENST00000485479 HMX1Q9NP08 348 aaPredicted RBP13.63□□□□□ -0.23
APTX-227ENST00000485479 RIC8AQ9NPQ8 531 aa13.63□□□□□ -0.23
APTX-227ENST00000485479 RTEL1Q9NZ71 1219 aa13.63□□□□□ -0.23
APTX-227ENST00000485479 ADD3Q9UEY8 706 aaKnown RBP13.63□□□□□ -0.23
APTX-227ENST00000485479 STK36Q9NRP7 1315 aa13.63□□□□□ -0.23
APTX-227ENST00000485479 PDE4DQ08499 809 aa13.63□□□□□ -0.23
APTX-227ENST00000485479 ACVR2BQ13705 512 aa13.63□□□□□ -0.23
APTX-227ENST00000485479 NPY5RQ15761 445 aa13.63□□□□□ -0.23
APTX-227ENST00000485479 OXER1Q8TDS5 423 aa13.63□□□□□ -0.23
APTX-227ENST00000485479 NSUN6Q8TEA1 469 aaKnown RBP13.63□□□□□ -0.23
APTX-227ENST00000485479 PDCD2LQ9BRP1 358 aa13.63□□□□□ -0.23
APTX-227ENST00000485479 ZMYND12Q9H0C1 365 aa13.63□□□□□ -0.23
APTX-227ENST00000485479 RBM27Q9P2N5 1060 aaKnown RBP13.63□□□□□ -0.23
APTX-227ENST00000485479 RPTORQ8N122 1335 aa13.62□□□□□ -0.23
APTX-227ENST00000485479 SYNGAP1Q96PV0 1343 aa13.62□□□□□ -0.23
APTX-227ENST00000485479 NR3C2P08235 984 aa13.62□□□□□ -0.23
APTX-227ENST00000485479 GHRHRQ02643 423 aa13.62□□□□□ -0.23
APTX-227ENST00000485479 TRAF1Q13077 416 aa13.62□□□□□ -0.23
APTX-227ENST00000485479 CCDC144BQ3MJ40 725 aa13.62□□□□□ -0.23
APTX-227ENST00000485479 SEPT14Q6ZU15 432 aa13.62□□□□□ -0.23
APTX-227ENST00000485479 ZNF467Q7Z7K2 595 aaPredicted RBP13.62□□□□□ -0.23
APTX-227ENST00000485479 PCDHA6Q9UN73 950 aa13.62□□□□□ -0.23
APTX-227ENST00000485479 PCDHA8Q9Y5H6 950 aa13.62□□□□□ -0.23
APTX-227ENST00000485479 FRMPD3Q5JV73 1810 aa13.62□□□□□ -0.23
APTX-227ENST00000485479 ASB14A6NK59 587 aa13.62□□□□□ -0.23
APTX-227ENST00000485479 SPDYE3A6NKU9 549 aa13.62□□□□□ -0.23
APTX-227ENST00000485479 PIK3CDO00329 1044 aa13.62□□□□□ -0.23
APTX-227ENST00000485479 EN2P19622 333 aaPredicted RBP13.62□□□□□ -0.23
APTX-227ENST00000485479 PPP1R18Q6NYC8 613 aa13.62□□□□□ -0.23
APTX-227ENST00000485479 TRMT44Q8IYL2 757 aaKnown RBP13.62□□□□□ -0.23
APTX-227ENST00000485479 DNERQ8NFT8 737 aa13.62□□□□□ -0.23
APTX-227ENST00000485479 COPS5Q92905 334 aa13.62□□□□□ -0.23
APTX-227ENST00000485479 ANO3Q9BYT9 981 aa13.62□□□□□ -0.23
APTX-227ENST00000485479 C6orf50Q9HD87 102 aa13.62□□□□□ -0.23
APTX-227ENST00000485479 FAM205CA6NFA0 338 aa13.61□□□□□ -0.23
APTX-227ENST00000485479 hCG_1984214I3L0E3 225 aa13.61□□□□□ -0.23
APTX-227ENST00000485479 RGS20O76081 388 aa13.61□□□□□ -0.23
APTX-227ENST00000485479 ARIH2O95376 493 aa13.61□□□□□ -0.23
APTX-227ENST00000485479 PGK1P00558 417 aa13.61□□□□□ -0.23
APTX-227ENST00000485479 EDNRBP24530 442 aa13.61□□□□□ -0.23
APTX-227ENST00000485479 CLK2P49760 499 aaKnown RBP13.61□□□□□ -0.23
APTX-227ENST00000485479 MRPL12P52815 198 aaKnown RBP13.61□□□□□ -0.23
APTX-227ENST00000485479 MRPS9P82933 396 aaKnown RBP13.61□□□□□ -0.23
APTX-227ENST00000485479 NR5A1Q13285 461 aa13.61□□□□□ -0.23
APTX-227ENST00000485479 REXO1Q8N1G1 1221 aaKnown RBP13.61□□□□□ -0.23
APTX-227ENST00000485479 ZNF713Q8N859 430 aaPredicted RBP13.61□□□□□ -0.23
APTX-227ENST00000485479 CCDC148Q8NFR7 591 aa13.61□□□□□ -0.23
APTX-227ENST00000485479 U2AF1L4Q8WU68 220 aaKnown RBP13.61□□□□□ -0.23
APTX-227ENST00000485479 ABHD16BQ9H3Z7 469 aa13.61□□□□□ -0.23
APTX-227ENST00000485479 DOCK5Q9H7D0 1870 aa13.61□□□□□ -0.23
APTX-227ENST00000485479 PAK6Q9NQU5 681 aaPredicted RBP13.61□□□□□ -0.23
APTX-227ENST00000485479 MYH7BA7E2Y1 1941 aa13.61□□□□□ -0.23
APTX-227ENST00000485479 K7ELQ4 463 aaPredicted RBP13.6□□□□□ -0.23
APTX-227ENST00000485479 GJB2P29033 226 aa13.6□□□□□ -0.23
APTX-227ENST00000485479 MCM2P49736 904 aa13.6□□□□□ -0.23
APTX-227ENST00000485479 EARS2Q5JPH6 523 aaKnown RBP13.6□□□□□ -0.23
APTX-227ENST00000485479 TAPT1Q6NXT6 567 aa13.6□□□□□ -0.23
APTX-227ENST00000485479 CYP2W1Q8TAV3 490 aa13.6□□□□□ -0.23
APTX-227ENST00000485479 CCDC12Q8WUD4 166 aaPredicted RBP13.6□□□□□ -0.23
APTX-227ENST00000485479 PHF20Q9BVI0 1012 aa13.6□□□□□ -0.23
APTX-227ENST00000485479 BCAS3Q9H6U6 928 aa13.6□□□□□ -0.23
APTX-227ENST00000485479 PKD2L1Q9P0L9 805 aa13.6□□□□□ -0.23
APTX-227ENST00000485479 KIAA1217Q5T5P2 1943 aa13.6□□□□□ -0.23
APTX-227ENST00000485479 MYADML2A6NDP7 307 aa13.6□□□□□ -0.23
APTX-227ENST00000485479 SEPT4O43236 478 aa13.6□□□□□ -0.23
APTX-227ENST00000485479 SMPD1P17405 629 aa13.6□□□□□ -0.23
APTX-227ENST00000485479 LY6KQ17RY6 165 aa13.6□□□□□ -0.23
APTX-227ENST00000485479 LHX8Q68G74 356 aa13.6□□□□□ -0.23
APTX-227ENST00000485479 KRT40Q6A162 431 aa13.6□□□□□ -0.23
APTX-227ENST00000485479 FAM184AQ8NB25 1140 aa13.6□□□□□ -0.23
APTX-227ENST00000485479 TMEM106CQ9BVX2 250 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms